RNA–Protein interactions for RNA: ENST00000575639.1

TRAPPC1-207, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-207ENST00000575639 NISCHQ9Y2I1 1504 aa35.93■■■■□ 3.34
TRAPPC1-207ENST00000575639 CCDC180Q9P1Z9 1646 aa31.79■■■□□ 2.68
TRAPPC1-207ENST00000575639 ABCC9O60706 1549 aa31.19■■■□□ 2.58
TRAPPC1-207ENST00000575639 DCAF8L2P0C7V8 631 aa30.21■■■□□ 2.43
TRAPPC1-207ENST00000575639 DNAJC5BQ9UF47 199 aa30.2■■■□□ 2.43
TRAPPC1-207ENST00000575639 RB1CC1Q8TDY2 1594 aa30■■■□□ 2.39
TRAPPC1-207ENST00000575639 NACADO15069 1562 aa29.99■■■□□ 2.39
TRAPPC1-207ENST00000575639 ZCCHC6Q5VYS8 1495 aaKnown RBP29.93■■■□□ 2.38
TRAPPC1-207ENST00000575639 MYO15BQ96JP2 1530 aa29.86■■■□□ 2.37
TRAPPC1-207ENST00000575639 DCAF1Q9Y4B6 1507 aa29.74■■■□□ 2.35
TRAPPC1-207ENST00000575639 PABPN1Q86U42 306 aaKnown RBP eCLIP29.25■■■□□ 2.27
TRAPPC1-207ENST00000575639 SCRIBQ14160 1630 aa29.07■■■□□ 2.24
TRAPPC1-207ENST00000575639 UNC13AQ9UPW8 1703 aa29.06■■■□□ 2.24
TRAPPC1-207ENST00000575639 BICRAQ9NZM4 1560 aa29.01■■■□□ 2.23
TRAPPC1-207ENST00000575639 SHROOM4Q9ULL8 1493 aa28.83■■■□□ 2.21
TRAPPC1-207ENST00000575639 DNAJC5Q9H3Z4 198 aa28.45■■■□□ 2.14
TRAPPC1-207ENST00000575639 EIF4G1Q04637 1599 aaKnown RBP28.28■■■□□ 2.12
TRAPPC1-207ENST00000575639 CC2D2AQ9P2K1 1620 aa28.14■■■□□ 2.09
TRAPPC1-207ENST00000575639 CECR2Q9BXF3 1484 aa28.13■■■□□ 2.09
TRAPPC1-207ENST00000575639 BAZ1AQ9NRL2 1556 aaPredicted RBP27.86■■■□□ 2.05
TRAPPC1-207ENST00000575639 SMARCA4P51532 1647 aa27.81■■■□□ 2.04
TRAPPC1-207ENST00000575639 NCAPD3P42695 1498 aa27.73■■■□□ 2.03
TRAPPC1-207ENST00000575639 ATAD2BQ9ULI0 1458 aa27.73■■■□□ 2.03
TRAPPC1-207ENST00000575639 SMARCA2P51531 1590 aa27.69■■■□□ 2.02
TRAPPC1-207ENST00000575639 MROH2BQ7Z745 1585 aa27.68■■■□□ 2.02
TRAPPC1-207ENST00000575639 PEG3Q9GZU2 1588 aa27.55■■■□□ 2
TRAPPC1-207ENST00000575639 HMGXB3Q12766 1538 aa27.52■■■□□ 2
TRAPPC1-207ENST00000575639 BAZ1BQ9UIG0 1483 aaKnown RBP27.52■■■□□ 2
TRAPPC1-207ENST00000575639 RSF1Q96T23 1441 aaPredicted RBP27.45■■□□□ 1.98
TRAPPC1-207ENST00000575639 WIZO95785 1651 aa27.3■■□□□ 1.96
TRAPPC1-207ENST00000575639 CUX2O14529 1486 aa27.21■■□□□ 1.95
TRAPPC1-207ENST00000575639 TOP2AP11388 1531 aaKnown RBP27.1■■□□□ 1.93
TRAPPC1-207ENST00000575639 NESP48681 1621 aa26.98■■□□□ 1.91
TRAPPC1-207ENST00000575639 CADPSQ9ULU8 1353 aa26.97■■□□□ 1.91
TRAPPC1-207ENST00000575639 ERCC6Q03468 1493 aa26.94■■□□□ 1.9
TRAPPC1-207ENST00000575639 SUPT5HO00267 1087 aaKnown RBP26.92■■□□□ 1.9
TRAPPC1-207ENST00000575639 LAMC3Q9Y6N6 1575 aa26.91■■□□□ 1.9
TRAPPC1-207ENST00000575639 PDS5BQ9NTI5 1447 aa26.86■■□□□ 1.89
TRAPPC1-207ENST00000575639 CCDC88BA6NC98 1476 aa26.83■■□□□ 1.89
TRAPPC1-207ENST00000575639 CFTRP13569 1480 aa26.76■■□□□ 1.87
TRAPPC1-207ENST00000575639 TRIM41Q8WV44 630 aa26.7■■□□□ 1.86
TRAPPC1-207ENST00000575639 FANCD2Q9BXW9 1451 aa26.61■■□□□ 1.85
TRAPPC1-207ENST00000575639 CEP164Q9UPV0 1460 aa26.55■■□□□ 1.84
TRAPPC1-207ENST00000575639 KIF21AQ7Z4S6 1674 aa26.51■■□□□ 1.83
TRAPPC1-207ENST00000575639 MRC2Q9UBG0 1479 aa26.5■■□□□ 1.83
TRAPPC1-207ENST00000575639 THOC2Q8NI27 1593 aaKnown RBP26.46■■□□□ 1.83
TRAPPC1-207ENST00000575639 WDR62O43379 1518 aa26.35■■□□□ 1.81
TRAPPC1-207ENST00000575639 PRDM2Q13029 1718 aa26.29■■□□□ 1.8
TRAPPC1-207ENST00000575639 URB2Q14146 1524 aaKnown RBP26.29■■□□□ 1.8
TRAPPC1-207ENST00000575639 ABCC8Q09428 1581 aa26.23■■□□□ 1.79
TRAPPC1-207ENST00000575639 TOPBP1Q92547 1522 aa26.15■■□□□ 1.78
TRAPPC1-207ENST00000575639 DNMBPQ6XZF7 1577 aa26.1■■□□□ 1.77
TRAPPC1-207ENST00000575639 IFT140Q96RY7 1462 aa26.03■■□□□ 1.76
TRAPPC1-207ENST00000575639 CUX1P39880 1505 aa25.95■■□□□ 1.74
TRAPPC1-207ENST00000575639 POLA1P09884 1462 aaPredicted RBP25.94■■□□□ 1.74
TRAPPC1-207ENST00000575639 SOGA1O94964 1423 aa25.92■■□□□ 1.74
TRAPPC1-207ENST00000575639 WRNQ14191 1432 aaPredicted RBP eCLIP25.9■■□□□ 1.74
TRAPPC1-207ENST00000575639 FGD5Q6ZNL6 1462 aa25.89■■□□□ 1.73
TRAPPC1-207ENST00000575639 RAD54L2Q9Y4B4 1467 aa25.85■■□□□ 1.73
TRAPPC1-207ENST00000575639 ZNF608Q9ULD9 1512 aaPredicted RBP25.84■■□□□ 1.73
TRAPPC1-207ENST00000575639 OSCARQ8IYS5 282 aa25.84■■□□□ 1.73
TRAPPC1-207ENST00000575639 TARBP1Q13395 1621 aaKnown RBP25.77■■□□□ 1.72
TRAPPC1-207ENST00000575639 TDRD9Q8NDG6 1382 aaKnown RBP25.77■■□□□ 1.72
TRAPPC1-207ENST00000575639 AQRO60306 1485 aaKnown RBP eCLIP25.76■■□□□ 1.712e-6■■■□□ 15.2
TRAPPC1-207ENST00000575639 TOP2BQ02880 1626 aa25.74■■□□□ 1.71
TRAPPC1-207ENST00000575639 SYNJ1O43426 1573 aa25.7■■□□□ 1.71
TRAPPC1-207ENST00000575639 BIVM-ERCC5R4GMW8 1640 aa25.66■■□□□ 1.7
TRAPPC1-207ENST00000575639 EIF4G3O43432 1585 aaKnown RBP25.66■■□□□ 1.7
TRAPPC1-207ENST00000575639 ABCA10Q8WWZ4 1543 aa25.65■■□□□ 1.7
TRAPPC1-207ENST00000575639 WDR97A6NE52 1622 aa25.63■■□□□ 1.69
TRAPPC1-207ENST00000575639 GAPVD1Q14C86 1478 aa25.59■■□□□ 1.69
TRAPPC1-207ENST00000575639 GRIN2BQ13224 1484 aa25.58■■□□□ 1.69
TRAPPC1-207ENST00000575639 RIMBP3CA6NJZ7 1639 aa25.56■■□□□ 1.68
TRAPPC1-207ENST00000575639 RIMBP3BA6NNM3 1639 aa25.56■■□□□ 1.68
TRAPPC1-207ENST00000575639 RIMBP3Q9UFD9 1639 aa25.56■■□□□ 1.68
TRAPPC1-207ENST00000575639 FBLN2P98095 1184 aa25.55■■□□□ 1.68
TRAPPC1-207ENST00000575639 CHMP7Q8WUX9 453 aaPredicted RBP25.5■■□□□ 1.67
TRAPPC1-207ENST00000575639 SNAPC4Q5SXM2 1469 aa25.49■■□□□ 1.67
TRAPPC1-207ENST00000575639 MAGI1Q96QZ7 1491 aaPredicted RBP25.48■■□□□ 1.67
TRAPPC1-207ENST00000575639 ABCA5Q8WWZ7 1642 aa25.44■■□□□ 1.66
TRAPPC1-207ENST00000575639 ARHGEF11O15085 1522 aa25.4■■□□□ 1.66
TRAPPC1-207ENST00000575639 KIF27Q86VH2 1401 aa25.39■■□□□ 1.66
TRAPPC1-207ENST00000575639 SYNJ2O15056 1496 aa25.39■■□□□ 1.65
TRAPPC1-207ENST00000575639 ERICH3Q5RHP9 1530 aa25.34■■□□□ 1.65
TRAPPC1-207ENST00000575639 PBRM1Q86U86 1689 aa25.32■■□□□ 1.64
TRAPPC1-207ENST00000575639 FHAD1B1AJZ9 1412 aa25.31■■□□□ 1.64
TRAPPC1-207ENST00000575639 TRHP20396 242 aaPredicted RBP25.31■■□□□ 1.64
TRAPPC1-207ENST00000575639 AEBP2Q6ZN18 517 aaPredicted RBP25.31■■□□□ 1.64
TRAPPC1-207ENST00000575639 CYB5RLQ6IPT4 315 aa25.3■■□□□ 1.64
TRAPPC1-207ENST00000575639 IGF1RP08069 1367 aa25.29■■□□□ 1.64
TRAPPC1-207ENST00000575639 CHD1O14646 1710 aa25.25■■□□□ 1.63
TRAPPC1-207ENST00000575639 ADAMTS12P58397 1594 aa25.22■■□□□ 1.63
TRAPPC1-207ENST00000575639 GRIN2AQ12879 1464 aa25.21■■□□□ 1.63
TRAPPC1-207ENST00000575639 CARMIL1Q5VZK9 1371 aa25.15■■□□□ 1.62
TRAPPC1-207ENST00000575639 CHIC1Q5VXU3 224 aa25.14■■□□□ 1.62
TRAPPC1-207ENST00000575639 NUP160Q12769 1436 aa25.11■■□□□ 1.61
TRAPPC1-207ENST00000575639 ARAP1Q96P48 1450 aa25.1■■□□□ 1.61
TRAPPC1-207ENST00000575639 CLASP1Q7Z460 1538 aa25.08■■□□□ 1.61
TRAPPC1-207ENST00000575639 RUSC2Q8N2Y8 1516 aa25.07■■□□□ 1.6
TRAPPC1-207ENST00000575639 CUL7Q14999 1698 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms