RNA–Protein interactions for RNA: ENST00000574671.5

ACTG1-207, Transcript of actin gamma 1, humanhuman

TSL 1 (best)

Gene ACTG1, Length 1,678 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTG1-207ENST00000574671 ZNF316A6NFI3 1004 aaPredicted RBP18.78■□□□□ 0.6
ACTG1-207ENST00000574671 AQRO60306 1485 aaKnown RBP eCLIP18.76■□□□□ 0.596e-18■■■■□ 21.7
ACTG1-207ENST00000574671 ZNF608Q9ULD9 1512 aaPredicted RBP18.75■□□□□ 0.59
ACTG1-207ENST00000574671 CARMIL1Q5VZK9 1371 aa18.75■□□□□ 0.59
ACTG1-207ENST00000574671 GRIN2BQ13224 1484 aa18.7■□□□□ 0.58
ACTG1-207ENST00000574671 CUL7Q14999 1698 aa18.69■□□□□ 0.58
ACTG1-207ENST00000574671 EIF4G3O43432 1585 aaKnown RBP18.66■□□□□ 0.58
ACTG1-207ENST00000574671 PBRM1Q86U86 1689 aa18.66■□□□□ 0.58
ACTG1-207ENST00000574671 FHAD1B1AJZ9 1412 aa18.61■□□□□ 0.57
ACTG1-207ENST00000574671 ARAP1Q96P48 1450 aa18.59■□□□□ 0.57
ACTG1-207ENST00000574671 NEUROD1Q13562 356 aa18.59■□□□□ 0.57
ACTG1-207ENST00000574671 MAP3K1Q13233 1512 aa18.58■□□□□ 0.57
ACTG1-207ENST00000574671 TTBK1Q5TCY1 1321 aaPredicted RBP18.58■□□□□ 0.56
ACTG1-207ENST00000574671 RRBP1Q9P2E9 1410 aaKnown RBP18.57■□□□□ 0.56
ACTG1-207ENST00000574671 SNAPC4Q5SXM2 1469 aa18.57■□□□□ 0.56
ACTG1-207ENST00000574671 MAGI1Q96QZ7 1491 aaPredicted RBP18.57■□□□□ 0.56
ACTG1-207ENST00000574671 ADAMTS12P58397 1594 aa18.56■□□□□ 0.56
ACTG1-207ENST00000574671 HNRNPUL2Q1KMD3 747 aaKnown RBP18.52■□□□□ 0.56
ACTG1-207ENST00000574671 SYNJ2O15056 1496 aa18.5■□□□□ 0.55
ACTG1-207ENST00000574671 CHMP7Q8WUX9 453 aaPredicted RBP18.49■□□□□ 0.55
ACTG1-207ENST00000574671 GRIN2AQ12879 1464 aa18.46■□□□□ 0.55
ACTG1-207ENST00000574671 GTF3C3Q9Y5Q9 886 aa18.45■□□□□ 0.54
ACTG1-207ENST00000574671 DHX57Q6P158 1386 aaKnown RBP18.44■□□□□ 0.54
ACTG1-207ENST00000574671 FBLN2P98095 1184 aa18.43■□□□□ 0.54
ACTG1-207ENST00000574671 ARHGAP35Q9NRY4 1499 aa18.42■□□□□ 0.54
ACTG1-207ENST00000574671 CTTNBP2Q8WZ74 1663 aa18.41■□□□□ 0.54
ACTG1-207ENST00000574671 RANGAP1P46060 587 aaPredicted RBP18.4■□□□□ 0.54
ACTG1-207ENST00000574671 MYT1Q01538 1121 aa18.4■□□□□ 0.54
ACTG1-207ENST00000574671 CCNB3Q8WWL7 1395 aa18.39■□□□□ 0.54
ACTG1-207ENST00000574671 KIAA0586Q9BVV6 1533 aa18.36■□□□□ 0.53
ACTG1-207ENST00000574671 TIAM1Q13009 1591 aa18.36■□□□□ 0.53
ACTG1-207ENST00000574671 NUP160Q12769 1436 aa18.35■□□□□ 0.53
ACTG1-207ENST00000574671 IQGAP2Q13576 1575 aa18.32■□□□□ 0.52
ACTG1-207ENST00000574671 CEP170Q5SW79 1584 aa18.31■□□□□ 0.52
ACTG1-207ENST00000574671 MIER1Q8N108 512 aa18.31■□□□□ 0.52
ACTG1-207ENST00000574671 CFAP43Q8NDM7 1665 aa18.29■□□□□ 0.52
ACTG1-207ENST00000574671 KANK4Q5T7N3 995 aaPredicted RBP18.29■□□□□ 0.52
ACTG1-207ENST00000574671 CHD1O14646 1710 aa18.29■□□□□ 0.52
ACTG1-207ENST00000574671 EFCAB5A4FU69 1503 aa18.29■□□□□ 0.52
ACTG1-207ENST00000574671 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.27■□□□□ 0.515e-7■□□□□ 8.4
ACTG1-207ENST00000574671 UGGT2Q9NYU1 1516 aa18.26■□□□□ 0.51
ACTG1-207ENST00000574671 TIMELESSQ9UNS1 1208 aa18.25■□□□□ 0.51
ACTG1-207ENST00000574671 LRRC9Q6ZRR7 1453 aa18.25■□□□□ 0.51
ACTG1-207ENST00000574671 SAMD9Q5K651 1589 aa18.24■□□□□ 0.51
ACTG1-207ENST00000574671 JPH4Q96JJ6 628 aa18.24■□□□□ 0.51
ACTG1-207ENST00000574671 P3H3Q8IVL6 736 aa18.23■□□□□ 0.51
ACTG1-207ENST00000574671 FYCO1Q9BQS8 1478 aa18.21■□□□□ 0.51
ACTG1-207ENST00000574671 FHOD3Q2V2M9 1422 aa18.19■□□□□ 0.5
ACTG1-207ENST00000574671 SETD5Q9C0A6 1442 aa18.18■□□□□ 0.5
ACTG1-207ENST00000574671 DISP1Q96F81 1524 aa18.17■□□□□ 0.5
ACTG1-207ENST00000574671 FMN1Q68DA7 1419 aa18.15■□□□□ 0.5
ACTG1-207ENST00000574671 RAB3GAP2Q9H2M9 1393 aa18.15■□□□□ 0.5
ACTG1-207ENST00000574671 CARMIL2Q6F5E8 1435 aa18.14■□□□□ 0.5
ACTG1-207ENST00000574671 OSCARQ8IYS5 282 aa18.13■□□□□ 0.49
ACTG1-207ENST00000574671 CASKIN1Q8WXD9 1431 aa18.13■□□□□ 0.49
ACTG1-207ENST00000574671 KIAA0556O60303 1618 aa18.13■□□□□ 0.49
ACTG1-207ENST00000574671 CLASP1Q7Z460 1538 aa18.12■□□□□ 0.49
ACTG1-207ENST00000574671 MAPKBP1O60336 1514 aa18.12■□□□□ 0.49
ACTG1-207ENST00000574671 PCF11O94913 1555 aaKnown RBP18.11■□□□□ 0.49
ACTG1-207ENST00000574671 YTHDC1Q96MU7 727 aaKnown RBP18.11■□□□□ 0.49
ACTG1-207ENST00000574671 SHROOM2Q13796 1616 aa18.1■□□□□ 0.49
ACTG1-207ENST00000574671 PRG4Q92954 1404 aaPredicted RBP18.1■□□□□ 0.49
ACTG1-207ENST00000574671 PHLDB1Q86UU1 1377 aa18.04■□□□□ 0.48
ACTG1-207ENST00000574671 ATP1B4Q9UN42 357 aaPredicted RBP18.02■□□□□ 0.47
ACTG1-207ENST00000574671 PTPRGP23470 1445 aa17.98■□□□□ 0.47
ACTG1-207ENST00000574671 ERCC6L2Q5T890 1561 aa17.95■□□□□ 0.46
ACTG1-207ENST00000574671 FGD6Q6ZV73 1430 aa17.95■□□□□ 0.46
ACTG1-207ENST00000574671 HECW1Q76N89 1606 aa17.94■□□□□ 0.46
ACTG1-207ENST00000574671 RAPGEF6Q8TEU7 1601 aa17.92■□□□□ 0.46
ACTG1-207ENST00000574671 HFM1A2PYH4 1435 aa17.92■□□□□ 0.46
ACTG1-207ENST00000574671 CCDC18Q5T9S5 1454 aa17.92■□□□□ 0.46
ACTG1-207ENST00000574671 PLB1Q6P1J6 1458 aa17.92■□□□□ 0.46
ACTG1-207ENST00000574671 EHBP1L1Q8N3D4 1523 aa17.91■□□□□ 0.46
ACTG1-207ENST00000574671 EPRSP07814 1512 aaKnown RBP17.9■□□□□ 0.46
ACTG1-207ENST00000574671 ABCA8O94911 1581 aa17.89■□□□□ 0.46
ACTG1-207ENST00000574671 NUP153P49790 1475 aaKnown RBP17.89■□□□□ 0.45
ACTG1-207ENST00000574671 ITGAEP38570 1179 aa17.89■□□□□ 0.45
ACTG1-207ENST00000574671 FAM50AQ14320 339 aaKnown RBP17.89■□□□□ 0.45
ACTG1-207ENST00000574671 SUPT6HQ7KZ85 1726 aaKnown RBP17.89■□□□□ 0.45
ACTG1-207ENST00000574671 UACAQ9BZF9 1416 aa17.88■□□□□ 0.45
ACTG1-207ENST00000574671 LRRIQ1Q96JM4 1722 aa17.88■□□□□ 0.45
ACTG1-207ENST00000574671 CCER2I3L3R5 266 aa17.87■□□□□ 0.45
ACTG1-207ENST00000574671 AKNAQ7Z591 1439 aa17.86■□□□□ 0.45
ACTG1-207ENST00000574671 MYOM3Q5VTT5 1437 aa17.85■□□□□ 0.45
ACTG1-207ENST00000574671 MTUS2Q5JR59 1369 aa17.85■□□□□ 0.45
ACTG1-207ENST00000574671 PPP1R15AO75807 674 aaPredicted RBP17.85■□□□□ 0.45
ACTG1-207ENST00000574671 SUPT16HQ9Y5B9 1047 aaKnown RBP17.84■□□□□ 0.45
ACTG1-207ENST00000574671 PTPN23Q9H3S7 1636 aa17.84■□□□□ 0.45
ACTG1-207ENST00000574671 CDK11AQ9UQ88 783 aaPredicted RBP17.83■□□□□ 0.45
ACTG1-207ENST00000574671 ARHGEF11O15085 1522 aa17.83■□□□□ 0.44
ACTG1-207ENST00000574671 CDK13Q14004 1512 aaKnown RBP17.82■□□□□ 0.44
ACTG1-207ENST00000574671 ARID3CA6NKF2 412 aa17.81■□□□□ 0.44
ACTG1-207ENST00000574671 UHRF1BP1LA0JNW5 1464 aa17.81■□□□□ 0.44
ACTG1-207ENST00000574671 ATP10BO94823 1461 aa17.8■□□□□ 0.44
ACTG1-207ENST00000574671 TCOF1Q13428 1488 aaKnown RBP17.8■□□□□ 0.44
ACTG1-207ENST00000574671 ABCC2Q92887 1545 aa17.79■□□□□ 0.44
ACTG1-207ENST00000574671 NCOA2Q15596 1464 aa17.79■□□□□ 0.44
ACTG1-207ENST00000574671 TONSLQ96HA7 1378 aa17.79■□□□□ 0.44
ACTG1-207ENST00000574671 GCC2Q8IWJ2 1684 aa17.77■□□□□ 0.44
ACTG1-207ENST00000574671 MAGI3Q5TCQ9 1506 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms