RNA–Protein interactions for RNA: ENST00000574671.5

ACTG1-207, Transcript of actin gamma 1, humanhuman

TSL 1 (best)

Gene ACTG1, Length 1,678 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTG1-207ENST00000574671 NISCHQ9Y2I1 1504 aa26.74■■□□□ 1.87
ACTG1-207ENST00000574671 CCDC180Q9P1Z9 1646 aa23.4■■□□□ 1.34
ACTG1-207ENST00000574671 ZCCHC6Q5VYS8 1495 aaKnown RBP22.39■■□□□ 1.17
ACTG1-207ENST00000574671 ABCC9O60706 1549 aa22.29■■□□□ 1.16
ACTG1-207ENST00000574671 DCAF1Q9Y4B6 1507 aa22.15■■□□□ 1.14
ACTG1-207ENST00000574671 DCAF8L2P0C7V8 631 aa22.14■■□□□ 1.13
ACTG1-207ENST00000574671 MYO15BQ96JP2 1530 aa21.99■■□□□ 1.11
ACTG1-207ENST00000574671 NACADO15069 1562 aa21.89■■□□□ 1.09
ACTG1-207ENST00000574671 RB1CC1Q8TDY2 1594 aa21.73■■□□□ 1.07
ACTG1-207ENST00000574671 SHROOM4Q9ULL8 1493 aa21.56■■□□□ 1.04
ACTG1-207ENST00000574671 SCRIBQ14160 1630 aa21.43■■□□□ 1.02
ACTG1-207ENST00000574671 SUPT5HO00267 1087 aaKnown RBP21.26■□□□□ 0.99
ACTG1-207ENST00000574671 UNC13AQ9UPW8 1703 aa21.22■□□□□ 0.99
ACTG1-207ENST00000574671 BICRAQ9NZM4 1560 aa21.06■□□□□ 0.96
ACTG1-207ENST00000574671 PABPN1Q86U42 306 aaKnown RBP eCLIP21■□□□□ 0.95
ACTG1-207ENST00000574671 CHIC1Q5VXU3 224 aa20.96■□□□□ 0.95
ACTG1-207ENST00000574671 CECR2Q9BXF3 1484 aa20.75■□□□□ 0.91
ACTG1-207ENST00000574671 BAZ1AQ9NRL2 1556 aaPredicted RBP20.66■□□□□ 0.9
ACTG1-207ENST00000574671 RSF1Q96T23 1441 aaPredicted RBP20.65■□□□□ 0.9
ACTG1-207ENST00000574671 MROH2BQ7Z745 1585 aa20.61■□□□□ 0.89
ACTG1-207ENST00000574671 HRCP23327 699 aa20.58■□□□□ 0.89
ACTG1-207ENST00000574671 SMARCA4P51532 1647 aa20.57■□□□□ 0.88
ACTG1-207ENST00000574671 EIF4G1Q04637 1599 aaKnown RBP20.44■□□□□ 0.86
ACTG1-207ENST00000574671 WIZO95785 1651 aa20.41■□□□□ 0.86
ACTG1-207ENST00000574671 PEG3Q9GZU2 1588 aa20.37■□□□□ 0.85
ACTG1-207ENST00000574671 ATAD2BQ9ULI0 1458 aa20.32■□□□□ 0.84
ACTG1-207ENST00000574671 SMARCA2P51531 1590 aa20.31■□□□□ 0.84
ACTG1-207ENST00000574671 PCGF6Q9BYE7 350 aa20.25■□□□□ 0.83
ACTG1-207ENST00000574671 NCAPD3P42695 1498 aa20.22■□□□□ 0.83
ACTG1-207ENST00000574671 TOP2AP11388 1531 aaKnown RBP20.22■□□□□ 0.83
ACTG1-207ENST00000574671 CC2D2AQ9P2K1 1620 aa20.19■□□□□ 0.82
ACTG1-207ENST00000574671 BAZ1BQ9UIG0 1483 aaKnown RBP20.17■□□□□ 0.82
ACTG1-207ENST00000574671 TRIM26Q12899 539 aaPredicted RBP20.16■□□□□ 0.82
ACTG1-207ENST00000574671 HMGXB3Q12766 1538 aa20.14■□□□□ 0.81
ACTG1-207ENST00000574671 LOC105371045A0A1W2PR82 267 aa20.06■□□□□ 0.8
ACTG1-207ENST00000574671 TRIM41Q8WV44 630 aa20.03■□□□□ 0.8
ACTG1-207ENST00000574671 CCDC88BA6NC98 1476 aa20.03■□□□□ 0.8
ACTG1-207ENST00000574671 ZEB1P37275 1124 aaPredicted RBP20.03■□□□□ 0.8
ACTG1-207ENST00000574671 DNAJC5BQ9UF47 199 aa19.91■□□□□ 0.78
ACTG1-207ENST00000574671 CFTRP13569 1480 aa19.69■□□□□ 0.74
ACTG1-207ENST00000574671 CADPSQ9ULU8 1353 aa19.68■□□□□ 0.74
ACTG1-207ENST00000574671 PPARGC1BQ86YN6 1023 aaKnown RBP19.67■□□□□ 0.74
ACTG1-207ENST00000574671 EEA1Q15075 1411 aa19.61■□□□□ 0.73
ACTG1-207ENST00000574671 WRNQ14191 1432 aaPredicted RBP eCLIP19.54■□□□□ 0.72
ACTG1-207ENST00000574671 LAMC3Q9Y6N6 1575 aa19.54■□□□□ 0.72
ACTG1-207ENST00000574671 FAM9AQ8IZU1 332 aaPredicted RBP19.52■□□□□ 0.72
ACTG1-207ENST00000574671 PRDM2Q13029 1718 aa19.51■□□□□ 0.71
ACTG1-207ENST00000574671 NESP48681 1621 aa19.5■□□□□ 0.71
ACTG1-207ENST00000574671 ABCC8Q09428 1581 aa19.47■□□□□ 0.71
ACTG1-207ENST00000574671 PDS5BQ9NTI5 1447 aa19.42■□□□□ 0.7
ACTG1-207ENST00000574671 FANCD2Q9BXW9 1451 aa19.42■□□□□ 0.7
ACTG1-207ENST00000574671 TNIKQ9UKE5 1360 aa19.4■□□□□ 0.7
ACTG1-207ENST00000574671 SYNJ1O43426 1573 aa19.32■□□□□ 0.68
ACTG1-207ENST00000574671 CEP164Q9UPV0 1460 aa19.31■□□□□ 0.68
ACTG1-207ENST00000574671 TOP2BQ02880 1626 aa19.3■□□□□ 0.68
ACTG1-207ENST00000574671 CEP162Q5TB80 1403 aa19.29■□□□□ 0.68
ACTG1-207ENST00000574671 CUX1P39880 1505 aa19.28■□□□□ 0.68
ACTG1-207ENST00000574671 BIVM-ERCC5R4GMW8 1640 aa19.27■□□□□ 0.67
ACTG1-207ENST00000574671 GOLGA3Q08378 1498 aa19.27■□□□□ 0.67
ACTG1-207ENST00000574671 KIF21AQ7Z4S6 1674 aa19.25■□□□□ 0.67
ACTG1-207ENST00000574671 CSRNP3Q8WYN3 585 aa19.23■□□□□ 0.67
ACTG1-207ENST00000574671 KIF21BO75037 1637 aa19.22■□□□□ 0.67
ACTG1-207ENST00000574671 DNMBPQ6XZF7 1577 aa19.19■□□□□ 0.66
ACTG1-207ENST00000574671 PELP1Q8IZL8 1130 aaKnown RBP19.19■□□□□ 0.66
ACTG1-207ENST00000574671 URB2Q14146 1524 aaKnown RBP19.18■□□□□ 0.66
ACTG1-207ENST00000574671 TOPBP1Q92547 1522 aa19.18■□□□□ 0.66
ACTG1-207ENST00000574671 SOGA1O94964 1423 aa19.17■□□□□ 0.66
ACTG1-207ENST00000574671 ERCC6Q03468 1493 aa19.16■□□□□ 0.66
ACTG1-207ENST00000574671 MRC2Q9UBG0 1479 aa19.14■□□□□ 0.65
ACTG1-207ENST00000574671 CCER1Q8TC90 406 aaPredicted RBP19.14■□□□□ 0.65
ACTG1-207ENST00000574671 FGD5Q6ZNL6 1462 aa19.11■□□□□ 0.65
ACTG1-207ENST00000574671 EHMT2Q96KQ7 1210 aa19.08■□□□□ 0.64
ACTG1-207ENST00000574671 POLA1P09884 1462 aaPredicted RBP19.07■□□□□ 0.64
ACTG1-207ENST00000574671 WDR62O43379 1518 aa19.05■□□□□ 0.64
ACTG1-207ENST00000574671 RUSC2Q8N2Y8 1516 aa19.02■□□□□ 0.64
ACTG1-207ENST00000574671 THOC2Q8NI27 1593 aaKnown RBP19.01■□□□□ 0.63
ACTG1-207ENST00000574671 UBTFP17480 764 aaKnown RBP19.01■□□□□ 0.63
ACTG1-207ENST00000574671 RAD54L2Q9Y4B4 1467 aa18.99■□□□□ 0.63
ACTG1-207ENST00000574671 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.98■□□□□ 0.63
ACTG1-207ENST00000574671 KIF27Q86VH2 1401 aa18.98■□□□□ 0.63
ACTG1-207ENST00000574671 ABCA10Q8WWZ4 1543 aa18.97■□□□□ 0.63
ACTG1-207ENST00000574671 VPS8Q8N3P4 1428 aa18.95■□□□□ 0.62
ACTG1-207ENST00000574671 CUX2O14529 1486 aa18.95■□□□□ 0.62
ACTG1-207ENST00000574671 CLIP1P30622 1438 aa18.95■□□□□ 0.62
ACTG1-207ENST00000574671 ERICH3Q5RHP9 1530 aa18.94■□□□□ 0.62
ACTG1-207ENST00000574671 TARBP1Q13395 1621 aaKnown RBP18.91■□□□□ 0.62
ACTG1-207ENST00000574671 IFT140Q96RY7 1462 aa18.89■□□□□ 0.61
ACTG1-207ENST00000574671 WDR97A6NE52 1622 aa18.88■□□□□ 0.61
ACTG1-207ENST00000574671 CENPBP07199 599 aaPredicted RBP18.88■□□□□ 0.61
ACTG1-207ENST00000574671 IGF1RP08069 1367 aa18.86■□□□□ 0.61
ACTG1-207ENST00000574671 DIEXFQ68CQ4 756 aaKnown RBP18.85■□□□□ 0.61
ACTG1-207ENST00000574671 TDRD9Q8NDG6 1382 aaKnown RBP18.85■□□□□ 0.61
ACTG1-207ENST00000574671 SCAF1Q9H7N4 1312 aaKnown RBP18.82■□□□□ 0.6
ACTG1-207ENST00000574671 CLSPNQ9HAW4 1339 aa18.82■□□□□ 0.6
ACTG1-207ENST00000574671 ACIN1Q9UKV3 1341 aaKnown RBP18.82■□□□□ 0.6
ACTG1-207ENST00000574671 GAPVD1Q14C86 1478 aa18.81■□□□□ 0.6
ACTG1-207ENST00000574671 APLP2Q06481 763 aa18.8■□□□□ 0.6
ACTG1-207ENST00000574671 ABCA5Q8WWZ7 1642 aa18.8■□□□□ 0.6
ACTG1-207ENST00000574671 PRXQ9BXM0 1461 aa18.79■□□□□ 0.6
ACTG1-207ENST00000574671 RAPGEF2Q9Y4G8 1499 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms