RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 FAM69CQ0P6D2 419 aa21.94■■□□□ 1.1
PRPF8-208ENST00000573716 JPH4Q96JJ6 628 aa21.94■■□□□ 1.1
PRPF8-208ENST00000573716 NPM1P06748 294 aaKnown RBP eCLIP21.92■■□□□ 1.1
PRPF8-208ENST00000573716 RUSC2Q8N2Y8 1516 aa21.87■■□□□ 1.09
PRPF8-208ENST00000573716 ABCC10Q5T3U5 1492 aa21.87■■□□□ 1.09
PRPF8-208ENST00000573716 DIP2BQ9P265 1576 aa21.83■■□□□ 1.09
PRPF8-208ENST00000573716 MAPKBP1O60336 1514 aa21.82■■□□□ 1.08
PRPF8-208ENST00000573716 ADCY10Q96PN6 1610 aa21.82■■□□□ 1.08
PRPF8-208ENST00000573716 TSPOAP1O95153 1857 aa21.81■■□□□ 1.08
PRPF8-208ENST00000573716 KDM6BO15054 1643 aa21.8■■□□□ 1.08
PRPF8-208ENST00000573716 KDM4FA0A1W2PPD8 638 aa21.72■■□□□ 1.07
PRPF8-208ENST00000573716 TTBK1Q5TCY1 1321 aaPredicted RBP21.72■■□□□ 1.07
PRPF8-208ENST00000573716 KIAA0586Q9BVV6 1533 aa21.68■■□□□ 1.06
PRPF8-208ENST00000573716 CUL7Q14999 1698 aa21.63■■□□□ 1.05
PRPF8-208ENST00000573716 PTPRGP23470 1445 aa21.61■■□□□ 1.05
PRPF8-208ENST00000573716 IGF1RP08069 1367 aa21.6■■□□□ 1.05
PRPF8-208ENST00000573716 KIF27Q86VH2 1401 aa21.58■■□□□ 1.05
PRPF8-208ENST00000573716 ILDR1Q86SU0 546 aaPredicted RBP21.55■■□□□ 1.04
PRPF8-208ENST00000573716 ABCC2Q92887 1545 aa21.53■■□□□ 1.04
PRPF8-208ENST00000573716 CARMIL2Q6F5E8 1435 aa21.53■■□□□ 1.04
PRPF8-208ENST00000573716 ASXL2Q76L83 1435 aa21.52■■□□□ 1.04
PRPF8-208ENST00000573716 TNIKQ9UKE5 1360 aa21.51■■□□□ 1.03
PRPF8-208ENST00000573716 PPRC1Q5VV67 1664 aaKnown RBP21.5■■□□□ 1.03
PRPF8-208ENST00000573716 ADGRL1O94910 1474 aa21.49■■□□□ 1.03
PRPF8-208ENST00000573716 PLB1Q6P1J6 1458 aa21.49■■□□□ 1.03
PRPF8-208ENST00000573716 CARMIL1Q5VZK9 1371 aa21.48■■□□□ 1.03
PRPF8-208ENST00000573716 GLI2P10070 1586 aa21.46■■□□□ 1.03
PRPF8-208ENST00000573716 IQGAP2Q13576 1575 aa21.46■■□□□ 1.03
PRPF8-208ENST00000573716 UACAQ9BZF9 1416 aa21.41■■□□□ 1.02
PRPF8-208ENST00000573716 UHRF1BP1LA0JNW5 1464 aa21.39■■□□□ 1.02
PRPF8-208ENST00000573716 EPRSP07814 1512 aaKnown RBP21.37■■□□□ 1.01
PRPF8-208ENST00000573716 COL17A1Q9UMD9 1497 aaPredicted RBP21.37■■□□□ 1.01
PRPF8-208ENST00000573716 MAP3K4Q9Y6R4 1608 aa21.37■■□□□ 1.01
PRPF8-208ENST00000573716 DISP1Q96F81 1524 aa21.35■■□□□ 1.01
PRPF8-208ENST00000573716 ZCCHC11Q5TAX3 1644 aaKnown RBP21.35■■□□□ 1.01
PRPF8-208ENST00000573716 TEX14Q8IWB6 1497 aa21.34■■□□□ 1.01
PRPF8-208ENST00000573716 HECW2Q9P2P5 1572 aa21.34■■□□□ 1.01
PRPF8-208ENST00000573716 KDM5BQ9UGL1 1544 aa21.32■■□□□ 1
PRPF8-208ENST00000573716 KIAA0556O60303 1618 aa21.26■□□□□ 0.99
PRPF8-208ENST00000573716 UGGT2Q9NYU1 1516 aa21.26■□□□□ 0.99
PRPF8-208ENST00000573716 WDR7Q9Y4E6 1490 aa21.23■□□□□ 0.99
PRPF8-208ENST00000573716 RAPGEF2Q9Y4G8 1499 aa21.23■□□□□ 0.99
PRPF8-208ENST00000573716 KCNH8Q96L42 1107 aa21.2■□□□□ 0.98
PRPF8-208ENST00000573716 CD109Q6YHK3 1445 aa21.16■□□□□ 0.98
PRPF8-208ENST00000573716 CFAP43Q8NDM7 1665 aa21.15■□□□□ 0.98
PRPF8-208ENST00000573716 CTTNBP2Q8WZ74 1663 aa21.14■□□□□ 0.97
PRPF8-208ENST00000573716 KIF21BO75037 1637 aa21.12■□□□□ 0.97
PRPF8-208ENST00000573716 MAGI3Q5TCQ9 1506 aa21.11■□□□□ 0.97
PRPF8-208ENST00000573716 GOLGA3Q08378 1498 aa21.08■□□□□ 0.97
PRPF8-208ENST00000573716 ABCA8O94911 1581 aa21.07■□□□□ 0.96
PRPF8-208ENST00000573716 ARID3CA6NKF2 412 aa21.06■□□□□ 0.96
PRPF8-208ENST00000573716 FAM9AQ8IZU1 332 aaPredicted RBP20.97■□□□□ 0.95
PRPF8-208ENST00000573716 FBXO41Q8TF61 875 aa20.97■□□□□ 0.95
PRPF8-208ENST00000573716 ARAP3Q8WWN8 1544 aa20.96■□□□□ 0.95
PRPF8-208ENST00000573716 P3H3Q8IVL6 736 aa20.96■□□□□ 0.95
PRPF8-208ENST00000573716 PTPRMP28827 1452 aa20.92■□□□□ 0.94
PRPF8-208ENST00000573716 ADAMTSL3P82987 1691 aa20.9■□□□□ 0.94
PRPF8-208ENST00000573716 ATP10BO94823 1461 aa20.9■□□□□ 0.94
PRPF8-208ENST00000573716 ARID4BQ4LE39 1312 aaPredicted RBP20.9■□□□□ 0.94
PRPF8-208ENST00000573716 RAPGEF3O95398 923 aa20.9■□□□□ 0.94
PRPF8-208ENST00000573716 ABCA9Q8IUA7 1624 aa20.89■□□□□ 0.93
PRPF8-208ENST00000573716 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.87■□□□□ 0.93
PRPF8-208ENST00000573716 HNRNPUL2Q1KMD3 747 aaKnown RBP20.87■□□□□ 0.93
PRPF8-208ENST00000573716 PRXQ9BXM0 1461 aa20.86■□□□□ 0.93
PRPF8-208ENST00000573716 PHLDB1Q86UU1 1377 aa20.85■□□□□ 0.93
PRPF8-208ENST00000573716 BCORL1Q5H9F3 1711 aa20.84■□□□□ 0.93
PRPF8-208ENST00000573716 MADDQ8WXG6 1647 aa20.84■□□□□ 0.93
PRPF8-208ENST00000573716 PCF11O94913 1555 aaKnown RBP20.81■□□□□ 0.92
PRPF8-208ENST00000573716 RAPGEF6Q8TEU7 1601 aa20.81■□□□□ 0.92
PRPF8-208ENST00000573716 NEO1Q92859 1461 aa20.81■□□□□ 0.92
PRPF8-208ENST00000573716 PLPPR3Q6T4P5 718 aa20.8■□□□□ 0.92
PRPF8-208ENST00000573716 FRMPD1Q5SYB0 1578 aa20.8■□□□□ 0.92
PRPF8-208ENST00000573716 RIMS1Q86UR5 1692 aaKnown RBP20.79■□□□□ 0.92
PRPF8-208ENST00000573716 RANGAP1P46060 587 aaPredicted RBP20.77■□□□□ 0.92
PRPF8-208ENST00000573716 LMTK3Q96Q04 1460 aa20.75■□□□□ 0.91
PRPF8-208ENST00000573716 SAMD9Q5K651 1589 aa20.75■□□□□ 0.91
PRPF8-208ENST00000573716 ARHGEF40Q8TER5 1519 aa20.73■□□□□ 0.91
PRPF8-208ENST00000573716 HSPA2P54652 639 aa20.71■□□□□ 0.91
PRPF8-208ENST00000573716 RICTORQ6R327 1708 aa20.7■□□□□ 0.9
PRPF8-208ENST00000573716 DENND4BO75064 1496 aaPredicted RBP20.69■□□□□ 0.9
PRPF8-208ENST00000573716 NUP153P49790 1475 aaKnown RBP20.69■□□□□ 0.9
PRPF8-208ENST00000573716 PLEKHD1A6NEE1 506 aa20.66■□□□□ 0.9
PRPF8-208ENST00000573716 AKNAQ7Z591 1439 aa20.66■□□□□ 0.9
PRPF8-208ENST00000573716 CFAP74Q9C0B2 1584 aa20.66■□□□□ 0.9
PRPF8-208ENST00000573716 FHOD3Q2V2M9 1422 aa20.65■□□□□ 0.9
PRPF8-208ENST00000573716 FANCAO15360 1455 aa20.64■□□□□ 0.89
PRPF8-208ENST00000573716 POGZQ7Z3K3 1410 aa20.64■□□□□ 0.89
PRPF8-208ENST00000573716 MLECQ14165 292 aa20.64■□□□□ 0.89
PRPF8-208ENST00000573716 CSRNP3Q8WYN3 585 aa20.64■□□□□ 0.89
PRPF8-208ENST00000573716 ZFYVE16Q7Z3T8 1539 aa20.62■□□□□ 0.89
PRPF8-208ENST00000573716 TTC37Q6PGP7 1564 aa20.6■□□□□ 0.89
PRPF8-208ENST00000573716 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.6■□□□□ 0.89
PRPF8-208ENST00000573716 SIGLEC1Q9BZZ2 1709 aa20.6■□□□□ 0.89
PRPF8-208ENST00000573716 YEATS2Q9ULM3 1422 aa20.6■□□□□ 0.89
PRPF8-208ENST00000573716 FER1L4A9Z1Z3 1794 aa20.59■□□□□ 0.89
PRPF8-208ENST00000573716 EFCAB5A4FU69 1503 aa20.59■□□□□ 0.89
PRPF8-208ENST00000573716 CERKQ8TCT0 537 aa20.58■□□□□ 0.89
PRPF8-208ENST00000573716 ZMYM4Q5VZL5 1548 aa20.58■□□□□ 0.88
PRPF8-208ENST00000573716 HECW1Q76N89 1606 aa20.54■□□□□ 0.88
PRPF8-208ENST00000573716 PHF23Q9BUL5 403 aaPredicted RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms