RNA–Protein interactions for RNA: ENST00000569487.1

KLHDC4-225, Transcript of kelch domain containing 4, humanhuman

TSL 2

Gene KLHDC4, Length 2,072 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-225ENST00000569487 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.44■■■□□ 2.14
KLHDC4-225ENST00000569487 CCER1Q8TC90 406 aaPredicted RBP28.44■■■□□ 2.14
KLHDC4-225ENST00000569487 FBLN2P98095 1184 aa28.42■■■□□ 2.14
KLHDC4-225ENST00000569487 CLIP1P30622 1438 aa28.37■■■□□ 2.13
KLHDC4-225ENST00000569487 CHMP7Q8WUX9 453 aaPredicted RBP28.33■■■□□ 2.13
KLHDC4-225ENST00000569487 MAGI1Q96QZ7 1491 aaPredicted RBP28.33■■■□□ 2.13
KLHDC4-225ENST00000569487 SCAF1Q9H7N4 1312 aaKnown RBP28.32■■■□□ 2.12
KLHDC4-225ENST00000569487 GRIN2AQ12879 1464 aa28.28■■■□□ 2.12
KLHDC4-225ENST00000569487 SYNJ2O15056 1496 aa28.28■■■□□ 2.12
KLHDC4-225ENST00000569487 P3H3Q8IVL6 736 aa28.27■■■□□ 2.12
KLHDC4-225ENST00000569487 PELP1Q8IZL8 1130 aaKnown RBP28.25■■■□□ 2.11
KLHDC4-225ENST00000569487 CTTNBP2Q8WZ74 1663 aa28.24■■■□□ 2.11
KLHDC4-225ENST00000569487 ARHGAP35Q9NRY4 1499 aa28.22■■■□□ 2.11
KLHDC4-225ENST00000569487 ARAP1Q96P48 1450 aa28.19■■■□□ 2.1
KLHDC4-225ENST00000569487 CEP170Q5SW79 1584 aa28.17■■■□□ 2.1
KLHDC4-225ENST00000569487 CHD1O14646 1710 aa28.14■■■□□ 2.1
KLHDC4-225ENST00000569487 FHOD3Q2V2M9 1422 aa28.08■■■□□ 2.09
KLHDC4-225ENST00000569487 IQGAP2Q13576 1575 aa28.07■■■□□ 2.08
KLHDC4-225ENST00000569487 NUP160Q12769 1436 aa28.07■■■□□ 2.08
KLHDC4-225ENST00000569487 DIEXFQ68CQ4 756 aaKnown RBP28.06■■■□□ 2.08
KLHDC4-225ENST00000569487 TTBK1Q5TCY1 1321 aaPredicted RBP28.06■■■□□ 2.08
KLHDC4-225ENST00000569487 KIAA0586Q9BVV6 1533 aa28.05■■■□□ 2.08
KLHDC4-225ENST00000569487 ACIN1Q9UKV3 1341 aaKnown RBP28.05■■■□□ 2.08
KLHDC4-225ENST00000569487 VPS8Q8N3P4 1428 aa28.03■■■□□ 2.08
KLHDC4-225ENST00000569487 SAMD9Q5K651 1589 aa27.95■■■□□ 2.07
KLHDC4-225ENST00000569487 JPH4Q96JJ6 628 aa27.95■■■□□ 2.07
KLHDC4-225ENST00000569487 EFCAB5A4FU69 1503 aa27.92■■■□□ 2.06
KLHDC4-225ENST00000569487 UGGT2Q9NYU1 1516 aa27.91■■■□□ 2.06
KLHDC4-225ENST00000569487 DISP1Q96F81 1524 aa27.91■■■□□ 2.06
KLHDC4-225ENST00000569487 NEUROD1Q13562 356 aa27.9■■■□□ 2.06
KLHDC4-225ENST00000569487 CENPBP07199 599 aaPredicted RBP27.88■■■□□ 2.05
KLHDC4-225ENST00000569487 ATP1B4Q9UN42 357 aaPredicted RBP27.87■■■□□ 2.05
KLHDC4-225ENST00000569487 ZNF316A6NFI3 1004 aaPredicted RBP27.85■■■□□ 2.05
KLHDC4-225ENST00000569487 KIAA0556O60303 1618 aa27.81■■■□□ 2.04
KLHDC4-225ENST00000569487 PCF11O94913 1555 aaKnown RBP27.8■■■□□ 2.04
KLHDC4-225ENST00000569487 PRG4Q92954 1404 aaPredicted RBP27.77■■■□□ 2.04
KLHDC4-225ENST00000569487 KANK4Q5T7N3 995 aaPredicted RBP27.77■■■□□ 2.04
KLHDC4-225ENST00000569487 ERCC6L2Q5T890 1561 aa27.77■■■□□ 2.04
KLHDC4-225ENST00000569487 CLASP1Q7Z460 1538 aa27.76■■■□□ 2.03
KLHDC4-225ENST00000569487 ARID3CA6NKF2 412 aa27.75■■■□□ 2.03
KLHDC4-225ENST00000569487 APLP2Q06481 763 aa27.72■■■□□ 2.03
KLHDC4-225ENST00000569487 FMN1Q68DA7 1419 aa27.71■■■□□ 2.03
KLHDC4-225ENST00000569487 OSCARQ8IYS5 282 aa27.69■■■□□ 2.02
KLHDC4-225ENST00000569487 CASKIN1Q8WXD9 1431 aa27.68■■■□□ 2.02
KLHDC4-225ENST00000569487 SHROOM2Q13796 1616 aa27.68■■■□□ 2.02
KLHDC4-225ENST00000569487 CARMIL2Q6F5E8 1435 aa27.67■■■□□ 2.02
KLHDC4-225ENST00000569487 HNRNPUL2Q1KMD3 747 aaKnown RBP27.66■■■□□ 2.02
KLHDC4-225ENST00000569487 LRRIQ1Q96JM4 1722 aa27.65■■■□□ 2.02
KLHDC4-225ENST00000569487 GTF3C3Q9Y5Q9 886 aa27.64■■■□□ 2.01
KLHDC4-225ENST00000569487 PLB1Q6P1J6 1458 aa27.62■■■□□ 2.01
KLHDC4-225ENST00000569487 FYCO1Q9BQS8 1478 aa27.62■■■□□ 2.01
KLHDC4-225ENST00000569487 TIAM1Q13009 1591 aa27.57■■■□□ 2
KLHDC4-225ENST00000569487 PTPRGP23470 1445 aa27.54■■■□□ 2
KLHDC4-225ENST00000569487 CDK13Q14004 1512 aaKnown RBP27.53■■■□□ 2
KLHDC4-225ENST00000569487 NUP153P49790 1475 aaKnown RBP27.5■■□□□ 1.99
KLHDC4-225ENST00000569487 RAPGEF6Q8TEU7 1601 aa27.49■■□□□ 1.99
KLHDC4-225ENST00000569487 CLSPNQ9HAW4 1339 aa27.49■■□□□ 1.99
KLHDC4-225ENST00000569487 CFAP43Q8NDM7 1665 aa27.48■■□□□ 1.99
KLHDC4-225ENST00000569487 LRRC9Q6ZRR7 1453 aa27.48■■□□□ 1.99
KLHDC4-225ENST00000569487 EPRSP07814 1512 aaKnown RBP27.47■■□□□ 1.99
KLHDC4-225ENST00000569487 HECW1Q76N89 1606 aa27.46■■□□□ 1.99
KLHDC4-225ENST00000569487 MAGI3Q5TCQ9 1506 aa27.44■■□□□ 1.98
KLHDC4-225ENST00000569487 MAP3K1Q13233 1512 aa27.44■■□□□ 1.98
KLHDC4-225ENST00000569487 ABCA8O94911 1581 aa27.43■■□□□ 1.98
KLHDC4-225ENST00000569487 MIER1Q8N108 512 aa27.39■■□□□ 1.98
KLHDC4-225ENST00000569487 MTUS2Q5JR59 1369 aa27.35■■□□□ 1.97
KLHDC4-225ENST00000569487 UACAQ9BZF9 1416 aa27.35■■□□□ 1.97
KLHDC4-225ENST00000569487 DHX57Q6P158 1386 aaKnown RBP27.34■■□□□ 1.97
KLHDC4-225ENST00000569487 RRBP1Q9P2E9 1410 aaKnown RBP27.34■■□□□ 1.97
KLHDC4-225ENST00000569487 CCDC18Q5T9S5 1454 aa27.33■■□□□ 1.97
KLHDC4-225ENST00000569487 ATP10BO94823 1461 aa27.33■■□□□ 1.97
KLHDC4-225ENST00000569487 PHLDB1Q86UU1 1377 aa27.33■■□□□ 1.97
KLHDC4-225ENST00000569487 YTHDC1Q96MU7 727 aaKnown RBP27.25■■□□□ 1.95
KLHDC4-225ENST00000569487 ARHGEF11O15085 1522 aa27.24■■□□□ 1.95
KLHDC4-225ENST00000569487 ABCC2Q92887 1545 aa27.23■■□□□ 1.95
KLHDC4-225ENST00000569487 NCOA2Q15596 1464 aa27.21■■□□□ 1.95
KLHDC4-225ENST00000569487 EHBP1L1Q8N3D4 1523 aa27.21■■□□□ 1.95
KLHDC4-225ENST00000569487 ADCY10Q96PN6 1610 aa27.19■■□□□ 1.94
KLHDC4-225ENST00000569487 PLEKHD1A6NEE1 506 aa27.15■■□□□ 1.94
KLHDC4-225ENST00000569487 SUPT6HQ7KZ85 1726 aaKnown RBP27.14■■□□□ 1.94
KLHDC4-225ENST00000569487 CYB5RLQ6IPT4 315 aa27.14■■□□□ 1.94
KLHDC4-225ENST00000569487 CDK11AQ9UQ88 783 aaPredicted RBP27.14■■□□□ 1.94
KLHDC4-225ENST00000569487 KIF14Q15058 1648 aa27.13■■□□□ 1.93
KLHDC4-225ENST00000569487 CCNB3Q8WWL7 1395 aa27.13■■□□□ 1.93
KLHDC4-225ENST00000569487 TROQ12816 1431 aaPredicted RBP27.13■■□□□ 1.93
KLHDC4-225ENST00000569487 RIMBP3CA6NJZ7 1639 aa27.13■■□□□ 1.93
KLHDC4-225ENST00000569487 RIMBP3BA6NNM3 1639 aa27.13■■□□□ 1.93
KLHDC4-225ENST00000569487 RIMBP3Q9UFD9 1639 aa27.13■■□□□ 1.93
KLHDC4-225ENST00000569487 UHRF1BP1LA0JNW5 1464 aa27.12■■□□□ 1.93
KLHDC4-225ENST00000569487 ITGAEP38570 1179 aa27.12■■□□□ 1.93
KLHDC4-225ENST00000569487 ZCCHC11Q5TAX3 1644 aaKnown RBP27.1■■□□□ 1.93
KLHDC4-225ENST00000569487 FAM50AQ14320 339 aaKnown RBP27.09■■□□□ 1.93
KLHDC4-225ENST00000569487 KDM5BQ9UGL1 1544 aa27.08■■□□□ 1.93
KLHDC4-225ENST00000569487 KCNH8Q96L42 1107 aa27.07■■□□□ 1.92
KLHDC4-225ENST00000569487 MYOM3Q5VTT5 1437 aa27.04■■□□□ 1.92
KLHDC4-225ENST00000569487 FGD6Q6ZV73 1430 aa27.03■■□□□ 1.92
KLHDC4-225ENST00000569487 ZNF644Q9H582 1327 aaPredicted RBP27■■□□□ 1.91
KLHDC4-225ENST00000569487 ABCC10Q5T3U5 1492 aa26.96■■□□□ 1.91
KLHDC4-225ENST00000569487 GPATCH8Q9UKJ3 1502 aaKnown RBP26.94■■□□□ 1.9
KLHDC4-225ENST00000569487 MYT1Q01538 1121 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms