RNA–Protein interactions for RNA: ENST00000569487.1

KLHDC4-225, Transcript of kelch domain containing 4, humanhuman

TSL 2

Gene KLHDC4, Length 2,072 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-225ENST00000569487 NISCHQ9Y2I1 1504 aa40.96■■■■■ 4.15
KLHDC4-225ENST00000569487 CCDC180Q9P1Z9 1646 aa35.67■■■■□ 3.3
KLHDC4-225ENST00000569487 ABCC9O60706 1549 aa34.36■■■■□ 3.09
KLHDC4-225ENST00000569487 ZCCHC6Q5VYS8 1495 aaKnown RBP34.32■■■■□ 3.08
KLHDC4-225ENST00000569487 DCAF8L2P0C7V8 631 aa34.23■■■■□ 3.07
KLHDC4-225ENST00000569487 DCAF1Q9Y4B6 1507 aa33.67■■■□□ 2.98
KLHDC4-225ENST00000569487 SHROOM4Q9ULL8 1493 aa33.54■■■□□ 2.96
KLHDC4-225ENST00000569487 NACADO15069 1562 aa33.33■■■□□ 2.93
KLHDC4-225ENST00000569487 MYO15BQ96JP2 1530 aa33.33■■■□□ 2.93
KLHDC4-225ENST00000569487 RB1CC1Q8TDY2 1594 aa33.15■■■□□ 2.9
KLHDC4-225ENST00000569487 SCRIBQ14160 1630 aa33.05■■■□□ 2.88
KLHDC4-225ENST00000569487 UNC13AQ9UPW8 1703 aa32.64■■■□□ 2.82
KLHDC4-225ENST00000569487 PABPN1Q86U42 306 aaKnown RBP eCLIP32.47■■■□□ 2.79
KLHDC4-225ENST00000569487 BICRAQ9NZM4 1560 aa32.33■■■□□ 2.77
KLHDC4-225ENST00000569487 SUPT5HO00267 1087 aaKnown RBP32.07■■■□□ 2.73
KLHDC4-225ENST00000569487 CECR2Q9BXF3 1484 aa32.04■■■□□ 2.72
KLHDC4-225ENST00000569487 MROH2BQ7Z745 1585 aa31.75■■■□□ 2.67
KLHDC4-225ENST00000569487 RSF1Q96T23 1441 aaPredicted RBP31.74■■■□□ 2.67
KLHDC4-225ENST00000569487 BAZ1AQ9NRL2 1556 aaPredicted RBP31.57■■■□□ 2.64
KLHDC4-225ENST00000569487 SMARCA4P51532 1647 aa31.54■■■□□ 2.64
KLHDC4-225ENST00000569487 WIZO95785 1651 aa31.48■■■□□ 2.63
KLHDC4-225ENST00000569487 EIF4G1Q04637 1599 aaKnown RBP31.33■■■□□ 2.61
KLHDC4-225ENST00000569487 CHIC1Q5VXU3 224 aa31.15■■■□□ 2.58
KLHDC4-225ENST00000569487 ATAD2BQ9ULI0 1458 aa31.14■■■□□ 2.58
KLHDC4-225ENST00000569487 PEG3Q9GZU2 1588 aa31.06■■■□□ 2.56
KLHDC4-225ENST00000569487 CC2D2AQ9P2K1 1620 aa30.99■■■□□ 2.55
KLHDC4-225ENST00000569487 TOP2AP11388 1531 aaKnown RBP30.98■■■□□ 2.55
KLHDC4-225ENST00000569487 SMARCA2P51531 1590 aa30.97■■■□□ 2.55
KLHDC4-225ENST00000569487 BAZ1BQ9UIG0 1483 aaKnown RBP30.91■■■□□ 2.54
KLHDC4-225ENST00000569487 NCAPD3P42695 1498 aa30.84■■■□□ 2.53
KLHDC4-225ENST00000569487 CCDC88BA6NC98 1476 aa30.8■■■□□ 2.52
KLHDC4-225ENST00000569487 DNAJC5BQ9UF47 199 aa30.78■■■□□ 2.52
KLHDC4-225ENST00000569487 HMGXB3Q12766 1538 aa30.71■■■□□ 2.51
KLHDC4-225ENST00000569487 HRCP23327 699 aa30.66■■■□□ 2.5
KLHDC4-225ENST00000569487 PCGF6Q9BYE7 350 aa30.31■■■□□ 2.44
KLHDC4-225ENST00000569487 ABCC8Q09428 1581 aa30.14■■■□□ 2.42
KLHDC4-225ENST00000569487 NESP48681 1621 aa30.12■■■□□ 2.41
KLHDC4-225ENST00000569487 CFTRP13569 1480 aa30.11■■■□□ 2.41
KLHDC4-225ENST00000569487 LOC105371045A0A1W2PR82 267 aa30.09■■■□□ 2.41
KLHDC4-225ENST00000569487 CADPSQ9ULU8 1353 aa30.09■■■□□ 2.41
KLHDC4-225ENST00000569487 TRIM41Q8WV44 630 aa30.02■■■□□ 2.4
KLHDC4-225ENST00000569487 TRIM26Q12899 539 aaPredicted RBP29.84■■■□□ 2.37
KLHDC4-225ENST00000569487 WRNQ14191 1432 aaPredicted RBP eCLIP29.83■■■□□ 2.37
KLHDC4-225ENST00000569487 PRDM2Q13029 1718 aa29.81■■■□□ 2.36
KLHDC4-225ENST00000569487 SYNJ1O43426 1573 aa29.79■■■□□ 2.36
KLHDC4-225ENST00000569487 LAMC3Q9Y6N6 1575 aa29.79■■■□□ 2.36
KLHDC4-225ENST00000569487 FANCD2Q9BXW9 1451 aa29.78■■■□□ 2.36
KLHDC4-225ENST00000569487 PPARGC1BQ86YN6 1023 aaKnown RBP29.77■■■□□ 2.36
KLHDC4-225ENST00000569487 FAM9AQ8IZU1 332 aaPredicted RBP29.69■■■□□ 2.34
KLHDC4-225ENST00000569487 CUX1P39880 1505 aa29.67■■■□□ 2.34
KLHDC4-225ENST00000569487 KIF21AQ7Z4S6 1674 aa29.62■■■□□ 2.33
KLHDC4-225ENST00000569487 PDS5BQ9NTI5 1447 aa29.6■■■□□ 2.33
KLHDC4-225ENST00000569487 TOP2BQ02880 1626 aa29.57■■■□□ 2.32
KLHDC4-225ENST00000569487 CEP164Q9UPV0 1460 aa29.56■■■□□ 2.32
KLHDC4-225ENST00000569487 SOGA1O94964 1423 aa29.52■■■□□ 2.32
KLHDC4-225ENST00000569487 BIVM-ERCC5R4GMW8 1640 aa29.51■■■□□ 2.31
KLHDC4-225ENST00000569487 RUSC2Q8N2Y8 1516 aa29.5■■■□□ 2.31
KLHDC4-225ENST00000569487 URB2Q14146 1524 aaKnown RBP29.48■■■□□ 2.31
KLHDC4-225ENST00000569487 EHMT2Q96KQ7 1210 aa29.44■■■□□ 2.3
KLHDC4-225ENST00000569487 TOPBP1Q92547 1522 aa29.42■■■□□ 2.3
KLHDC4-225ENST00000569487 ZEB1P37275 1124 aaPredicted RBP29.4■■■□□ 2.3
KLHDC4-225ENST00000569487 FGD5Q6ZNL6 1462 aa29.38■■■□□ 2.29
KLHDC4-225ENST00000569487 DNMBPQ6XZF7 1577 aa29.37■■■□□ 2.29
KLHDC4-225ENST00000569487 ERCC6Q03468 1493 aa29.37■■■□□ 2.29
KLHDC4-225ENST00000569487 RAD54L2Q9Y4B4 1467 aa29.3■■■□□ 2.28
KLHDC4-225ENST00000569487 POLA1P09884 1462 aaPredicted RBP29.28■■■□□ 2.28
KLHDC4-225ENST00000569487 MRC2Q9UBG0 1479 aa29.28■■■□□ 2.28
KLHDC4-225ENST00000569487 CSRNP3Q8WYN3 585 aa29.16■■■□□ 2.26
KLHDC4-225ENST00000569487 THOC2Q8NI27 1593 aaKnown RBP29.15■■■□□ 2.26
KLHDC4-225ENST00000569487 CUX2O14529 1486 aa29.14■■■□□ 2.26
KLHDC4-225ENST00000569487 WDR62O43379 1518 aa29.12■■■□□ 2.25
KLHDC4-225ENST00000569487 KIF27Q86VH2 1401 aa29.04■■■□□ 2.24
KLHDC4-225ENST00000569487 TDRD9Q8NDG6 1382 aaKnown RBP29.04■■■□□ 2.24
KLHDC4-225ENST00000569487 EEA1Q15075 1411 aa29.04■■■□□ 2.24
KLHDC4-225ENST00000569487 ABCA10Q8WWZ4 1543 aa29.02■■■□□ 2.24
KLHDC4-225ENST00000569487 TARBP1Q13395 1621 aaKnown RBP28.99■■■□□ 2.23
KLHDC4-225ENST00000569487 WDR97A6NE52 1622 aa28.95■■■□□ 2.23
KLHDC4-225ENST00000569487 IGF1RP08069 1367 aa28.94■■■□□ 2.22
KLHDC4-225ENST00000569487 ZNF608Q9ULD9 1512 aaPredicted RBP28.92■■■□□ 2.22
KLHDC4-225ENST00000569487 AQRO60306 1485 aaKnown RBP eCLIP28.9■■■□□ 2.223e-9■■□□□ 14.2
KLHDC4-225ENST00000569487 RAPGEF2Q9Y4G8 1499 aa28.88■■■□□ 2.21
KLHDC4-225ENST00000569487 IFT140Q96RY7 1462 aa28.84■■■□□ 2.21
KLHDC4-225ENST00000569487 UBTFP17480 764 aaKnown RBP28.82■■■□□ 2.2
KLHDC4-225ENST00000569487 ABCA5Q8WWZ7 1642 aa28.82■■■□□ 2.2
KLHDC4-225ENST00000569487 GAPVD1Q14C86 1478 aa28.82■■■□□ 2.2
KLHDC4-225ENST00000569487 PRXQ9BXM0 1461 aa28.81■■■□□ 2.2
KLHDC4-225ENST00000569487 KIF21BO75037 1637 aa28.78■■■□□ 2.2
KLHDC4-225ENST00000569487 GOLGA3Q08378 1498 aa28.76■■■□□ 2.19
KLHDC4-225ENST00000569487 CARMIL1Q5VZK9 1371 aa28.75■■■□□ 2.19
KLHDC4-225ENST00000569487 RANGAP1P46060 587 aaPredicted RBP28.68■■■□□ 2.18
KLHDC4-225ENST00000569487 EIF4G3O43432 1585 aaKnown RBP28.67■■■□□ 2.18
KLHDC4-225ENST00000569487 PBRM1Q86U86 1689 aa28.64■■■□□ 2.18
KLHDC4-225ENST00000569487 TNIKQ9UKE5 1360 aa28.64■■■□□ 2.17
KLHDC4-225ENST00000569487 ERICH3Q5RHP9 1530 aa28.62■■■□□ 2.17
KLHDC4-225ENST00000569487 GRIN2BQ13224 1484 aa28.59■■■□□ 2.17
KLHDC4-225ENST00000569487 CEP162Q5TB80 1403 aa28.56■■■□□ 2.16
KLHDC4-225ENST00000569487 CUL7Q14999 1698 aa28.54■■■□□ 2.16
KLHDC4-225ENST00000569487 SNAPC4Q5SXM2 1469 aa28.53■■■□□ 2.16
KLHDC4-225ENST00000569487 ADAMTS12P58397 1594 aa28.47■■■□□ 2.15
KLHDC4-225ENST00000569487 FHAD1B1AJZ9 1412 aa28.45■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms