RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 CYB5RLQ6IPT4 315 aa21.33■■□□□ 1.01
CDT1-203ENST00000569140 CSRNP3Q8WYN3 585 aa21.33■■□□□ 1.01
CDT1-203ENST00000569140 SHROOM2Q13796 1616 aa21.33■■□□□ 1
CDT1-203ENST00000569140 ARAP1Q96P48 1450 aa21.32■■□□□ 1
CDT1-203ENST00000569140 KIAA0586Q9BVV6 1533 aa21.31■■□□□ 1
CDT1-203ENST00000569140 JPH4Q96JJ6 628 aa21.3■■□□□ 1
CDT1-203ENST00000569140 ERCC6L2Q5T890 1561 aa21.3■■□□□ 1
CDT1-203ENST00000569140 PRG4Q92954 1404 aaPredicted RBP21.29■■□□□ 1
CDT1-203ENST00000569140 PRXQ9BXM0 1461 aa21.28■■□□□ 1
CDT1-203ENST00000569140 IQGAP2Q13576 1575 aa21.26■□□□□ 0.99
CDT1-203ENST00000569140 CTTNBP2Q8WZ74 1663 aa21.23■□□□□ 0.99
CDT1-203ENST00000569140 EHMT2Q96KQ7 1210 aa21.2■□□□□ 0.98
CDT1-203ENST00000569140 TTBK1Q5TCY1 1321 aaPredicted RBP21.16■□□□□ 0.98
CDT1-203ENST00000569140 KIF21BO75037 1637 aa21.15■□□□□ 0.98
CDT1-203ENST00000569140 CARMIL2Q6F5E8 1435 aa21.14■□□□□ 0.98
CDT1-203ENST00000569140 UGGT2Q9NYU1 1516 aa21.09■□□□□ 0.97
CDT1-203ENST00000569140 RANGAP1P46060 587 aaPredicted RBP21.07■□□□□ 0.96
CDT1-203ENST00000569140 KIAA0556O60303 1618 aa21.06■□□□□ 0.96
CDT1-203ENST00000569140 DISP1Q96F81 1524 aa21.05■□□□□ 0.96
CDT1-203ENST00000569140 UBTFP17480 764 aaKnown RBP21.05■□□□□ 0.96
CDT1-203ENST00000569140 TNIKQ9UKE5 1360 aa21.05■□□□□ 0.96
CDT1-203ENST00000569140 GOLGA3Q08378 1498 aa21.05■□□□□ 0.96
CDT1-203ENST00000569140 PTPRGP23470 1445 aa21.04■□□□□ 0.96
CDT1-203ENST00000569140 P3H3Q8IVL6 736 aa20.97■□□□□ 0.95
CDT1-203ENST00000569140 TRHP20396 242 aaPredicted RBP20.95■□□□□ 0.94
CDT1-203ENST00000569140 ADCY10Q96PN6 1610 aa20.95■□□□□ 0.94
CDT1-203ENST00000569140 NPM1P06748 294 aaKnown RBP eCLIP20.93■□□□□ 0.94
CDT1-203ENST00000569140 SAMD9Q5K651 1589 aa20.9■□□□□ 0.94
CDT1-203ENST00000569140 UACAQ9BZF9 1416 aa20.88■□□□□ 0.93
CDT1-203ENST00000569140 ABCC2Q92887 1545 aa20.85■□□□□ 0.93
CDT1-203ENST00000569140 FHOD3Q2V2M9 1422 aa20.85■□□□□ 0.93
CDT1-203ENST00000569140 EFCAB5A4FU69 1503 aa20.84■□□□□ 0.93
CDT1-203ENST00000569140 PLB1Q6P1J6 1458 aa20.83■□□□□ 0.93
CDT1-203ENST00000569140 UHRF1BP1LA0JNW5 1464 aa20.81■□□□□ 0.92
CDT1-203ENST00000569140 ABCA8O94911 1581 aa20.78■□□□□ 0.92
CDT1-203ENST00000569140 ARID3CA6NKF2 412 aa20.76■□□□□ 0.91
CDT1-203ENST00000569140 MAPKBP1O60336 1514 aa20.76■□□□□ 0.91
CDT1-203ENST00000569140 ZCCHC11Q5TAX3 1644 aaKnown RBP20.75■□□□□ 0.91
CDT1-203ENST00000569140 RAPGEF6Q8TEU7 1601 aa20.74■□□□□ 0.91
CDT1-203ENST00000569140 ARHGAP35Q9NRY4 1499 aa20.74■□□□□ 0.91
CDT1-203ENST00000569140 KDM5BQ9UGL1 1544 aa20.72■□□□□ 0.91
CDT1-203ENST00000569140 ASXL2Q76L83 1435 aa20.7■□□□□ 0.9
CDT1-203ENST00000569140 LOC105371045A0A1W2PR82 267 aa20.68■□□□□ 0.9
CDT1-203ENST00000569140 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.68■□□□□ 0.9
CDT1-203ENST00000569140 FAM69CQ0P6D2 419 aa20.68■□□□□ 0.9
CDT1-203ENST00000569140 HNRNPUL2Q1KMD3 747 aaKnown RBP20.68■□□□□ 0.9
CDT1-203ENST00000569140 CLIP1P30622 1438 aa20.68■□□□□ 0.9
CDT1-203ENST00000569140 KIF13AQ9H1H9 1805 aa20.67■□□□□ 0.9
CDT1-203ENST00000569140 ATP1B4Q9UN42 357 aaPredicted RBP20.67■□□□□ 0.9
CDT1-203ENST00000569140 ABCC10Q5T3U5 1492 aa20.67■□□□□ 0.9
CDT1-203ENST00000569140 DIP2BQ9P265 1576 aa20.66■□□□□ 0.9
CDT1-203ENST00000569140 FMN1Q68DA7 1419 aa20.65■□□□□ 0.9
CDT1-203ENST00000569140 NUP153P49790 1475 aaKnown RBP20.62■□□□□ 0.89
CDT1-203ENST00000569140 ATP10BO94823 1461 aa20.61■□□□□ 0.89
CDT1-203ENST00000569140 WDR7Q9Y4E6 1490 aa20.61■□□□□ 0.89
CDT1-203ENST00000569140 CEP162Q5TB80 1403 aa20.61■□□□□ 0.89
CDT1-203ENST00000569140 HECW1Q76N89 1606 aa20.6■□□□□ 0.89
CDT1-203ENST00000569140 KCNH8Q96L42 1107 aa20.57■□□□□ 0.88
CDT1-203ENST00000569140 EPRSP07814 1512 aaKnown RBP20.57■□□□□ 0.88
CDT1-203ENST00000569140 TSPOAP1O95153 1857 aa20.56■□□□□ 0.88
CDT1-203ENST00000569140 PCF11O94913 1555 aaKnown RBP20.55■□□□□ 0.88
CDT1-203ENST00000569140 CDK13Q14004 1512 aaKnown RBP20.54■□□□□ 0.88
CDT1-203ENST00000569140 GLI2P10070 1586 aa20.51■□□□□ 0.87
CDT1-203ENST00000569140 PLEKHD1A6NEE1 506 aa20.49■□□□□ 0.87
CDT1-203ENST00000569140 CASKIN1Q8WXD9 1431 aa20.48■□□□□ 0.87
CDT1-203ENST00000569140 MAP3K4Q9Y6R4 1608 aa20.46■□□□□ 0.87
CDT1-203ENST00000569140 FYCO1Q9BQS8 1478 aa20.46■□□□□ 0.87
CDT1-203ENST00000569140 LRRIQ1Q96JM4 1722 aa20.44■□□□□ 0.86
CDT1-203ENST00000569140 CFAP43Q8NDM7 1665 aa20.43■□□□□ 0.86
CDT1-203ENST00000569140 CDK11AQ9UQ88 783 aaPredicted RBP20.42■□□□□ 0.86
CDT1-203ENST00000569140 CCDC18Q5T9S5 1454 aa20.42■□□□□ 0.86
CDT1-203ENST00000569140 CD109Q6YHK3 1445 aa20.41■□□□□ 0.86
CDT1-203ENST00000569140 PPRC1Q5VV67 1664 aaKnown RBP20.41■□□□□ 0.86
CDT1-203ENST00000569140 TEX14Q8IWB6 1497 aa20.39■□□□□ 0.85
CDT1-203ENST00000569140 ABCA9Q8IUA7 1624 aa20.38■□□□□ 0.85
CDT1-203ENST00000569140 KDM6BO15054 1643 aa20.36■□□□□ 0.85
CDT1-203ENST00000569140 KIF14Q15058 1648 aa20.34■□□□□ 0.85
CDT1-203ENST00000569140 TROQ12816 1431 aaPredicted RBP20.33■□□□□ 0.84
CDT1-203ENST00000569140 VPS8Q8N3P4 1428 aa20.33■□□□□ 0.84
CDT1-203ENST00000569140 MAGI3Q5TCQ9 1506 aa20.32■□□□□ 0.84
CDT1-203ENST00000569140 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.32■□□□□ 0.84
CDT1-203ENST00000569140 TTC37Q6PGP7 1564 aa20.32■□□□□ 0.84
CDT1-203ENST00000569140 MTUS2Q5JR59 1369 aa20.26■□□□□ 0.83
CDT1-203ENST00000569140 MYO5CQ9NQX4 1742 aa20.24■□□□□ 0.83
CDT1-203ENST00000569140 CFAP74Q9C0B2 1584 aa20.21■□□□□ 0.83
CDT1-203ENST00000569140 FANCAO15360 1455 aa20.21■□□□□ 0.83
CDT1-203ENST00000569140 NEO1Q92859 1461 aa20.2■□□□□ 0.82
CDT1-203ENST00000569140 EHBP1L1Q8N3D4 1523 aa20.2■□□□□ 0.82
CDT1-203ENST00000569140 TIAM1Q13009 1591 aa20.2■□□□□ 0.82
CDT1-203ENST00000569140 ARHGAP5Q13017 1502 aa20.19■□□□□ 0.82
CDT1-203ENST00000569140 COL17A1Q9UMD9 1497 aaPredicted RBP20.18■□□□□ 0.82
CDT1-203ENST00000569140 APLP2Q06481 763 aa20.18■□□□□ 0.82
CDT1-203ENST00000569140 PLCH2O75038 1416 aa20.18■□□□□ 0.82
CDT1-203ENST00000569140 PHLDB1Q86UU1 1377 aa20.16■□□□□ 0.82
CDT1-203ENST00000569140 AKNAQ7Z591 1439 aa20.15■□□□□ 0.82
CDT1-203ENST00000569140 PREX2Q70Z35 1606 aa20.13■□□□□ 0.81
CDT1-203ENST00000569140 ARAP3Q8WWN8 1544 aa20.13■□□□□ 0.81
CDT1-203ENST00000569140 EFCAB2Q5VUJ9 269 aa20.13■□□□□ 0.81
CDT1-203ENST00000569140 CCNB3Q8WWL7 1395 aa20.12■□□□□ 0.81
CDT1-203ENST00000569140 CDC42BPAQ5VT25 1732 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms