RNA–Protein interactions for RNA: ENST00000567946.1

PKD1-234, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,822 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-234ENST00000567946 FHAD1B1AJZ9 1412 aa25.38■■□□□ 1.65
PKD1-234ENST00000567946 SNAPC4Q5SXM2 1469 aa25.38■■□□□ 1.65
PKD1-234ENST00000567946 TTBK1Q5TCY1 1321 aaPredicted RBP25.35■■□□□ 1.65
PKD1-234ENST00000567946 ARHGAP35Q9NRY4 1499 aa25.33■■□□□ 1.65
PKD1-234ENST00000567946 MAGI1Q96QZ7 1491 aaPredicted RBP25.32■■□□□ 1.64
PKD1-234ENST00000567946 CTTNBP2Q8WZ74 1663 aa25.3■■□□□ 1.64
PKD1-234ENST00000567946 SYNJ2O15056 1496 aa25.23■■□□□ 1.63
PKD1-234ENST00000567946 GRIN2AQ12879 1464 aa25.21■■□□□ 1.63
PKD1-234ENST00000567946 APLP2Q06481 763 aa25.21■■□□□ 1.63
PKD1-234ENST00000567946 FBLN2P98095 1184 aa25.16■■□□□ 1.62
PKD1-234ENST00000567946 CHMP7Q8WUX9 453 aaPredicted RBP25.15■■□□□ 1.62
PKD1-234ENST00000567946 CEP170Q5SW79 1584 aa25.1■■□□□ 1.61
PKD1-234ENST00000567946 CHD1O14646 1710 aa25.1■■□□□ 1.61
PKD1-234ENST00000567946 EFCAB5A4FU69 1503 aa25.09■■□□□ 1.61
PKD1-234ENST00000567946 IQGAP2Q13576 1575 aa25.07■■□□□ 1.6
PKD1-234ENST00000567946 NUP160Q12769 1436 aa25.05■■□□□ 1.6
PKD1-234ENST00000567946 KIAA0586Q9BVV6 1533 aa25.05■■□□□ 1.6
PKD1-234ENST00000567946 FHOD3Q2V2M9 1422 aa25.03■■□□□ 1.6
PKD1-234ENST00000567946 P3H3Q8IVL6 736 aa25.02■■□□□ 1.6
PKD1-234ENST00000567946 SAMD9Q5K651 1589 aa25.02■■□□□ 1.6
PKD1-234ENST00000567946 KANK4Q5T7N3 995 aaPredicted RBP25■■□□□ 1.59
PKD1-234ENST00000567946 PCF11O94913 1555 aaKnown RBP24.96■■□□□ 1.59
PKD1-234ENST00000567946 UGGT2Q9NYU1 1516 aa24.96■■□□□ 1.59
PKD1-234ENST00000567946 TIAM1Q13009 1591 aa24.94■■□□□ 1.58
PKD1-234ENST00000567946 MAP3K1Q13233 1512 aa24.92■■□□□ 1.58
PKD1-234ENST00000567946 DISP1Q96F81 1524 aa24.88■■□□□ 1.57
PKD1-234ENST00000567946 FYCO1Q9BQS8 1478 aa24.87■■□□□ 1.57
PKD1-234ENST00000567946 CFAP43Q8NDM7 1665 aa24.87■■□□□ 1.57
PKD1-234ENST00000567946 ZEB1P37275 1124 aaPredicted RBP24.86■■□□□ 1.57
PKD1-234ENST00000567946 OSCARQ8IYS5 282 aa24.86■■□□□ 1.57
PKD1-234ENST00000567946 FMN1Q68DA7 1419 aa24.86■■□□□ 1.57
PKD1-234ENST00000567946 CASKIN1Q8WXD9 1431 aa24.86■■□□□ 1.57
PKD1-234ENST00000567946 JPH4Q96JJ6 628 aa24.84■■□□□ 1.57
PKD1-234ENST00000567946 KIAA0556O60303 1618 aa24.84■■□□□ 1.57
PKD1-234ENST00000567946 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.83■■□□□ 1.57
PKD1-234ENST00000567946 LRRC9Q6ZRR7 1453 aa24.81■■□□□ 1.56
PKD1-234ENST00000567946 HNRNPUL2Q1KMD3 747 aaKnown RBP24.79■■□□□ 1.56
PKD1-234ENST00000567946 ATP1B4Q9UN42 357 aaPredicted RBP24.79■■□□□ 1.56
PKD1-234ENST00000567946 CLASP1Q7Z460 1538 aa24.78■■□□□ 1.56
PKD1-234ENST00000567946 SHROOM2Q13796 1616 aa24.77■■□□□ 1.56
PKD1-234ENST00000567946 RRBP1Q9P2E9 1410 aaKnown RBP24.77■■□□□ 1.56
PKD1-234ENST00000567946 CCER1Q8TC90 406 aaPredicted RBP24.74■■□□□ 1.55
PKD1-234ENST00000567946 LRRIQ1Q96JM4 1722 aa24.7■■□□□ 1.54
PKD1-234ENST00000567946 PRG4Q92954 1404 aaPredicted RBP24.69■■□□□ 1.54
PKD1-234ENST00000567946 CARMIL2Q6F5E8 1435 aa24.68■■□□□ 1.54
PKD1-234ENST00000567946 CCNB3Q8WWL7 1395 aa24.68■■□□□ 1.54
PKD1-234ENST00000567946 ERCC6L2Q5T890 1561 aa24.65■■□□□ 1.54
PKD1-234ENST00000567946 PHLDB1Q86UU1 1377 aa24.64■■□□□ 1.53
PKD1-234ENST00000567946 HECW1Q76N89 1606 aa24.6■■□□□ 1.53
PKD1-234ENST00000567946 RAPGEF6Q8TEU7 1601 aa24.56■■□□□ 1.52
PKD1-234ENST00000567946 CCDC18Q5T9S5 1454 aa24.55■■□□□ 1.52
PKD1-234ENST00000567946 PLB1Q6P1J6 1458 aa24.55■■□□□ 1.52
PKD1-234ENST00000567946 MTUS2Q5JR59 1369 aa24.55■■□□□ 1.52
PKD1-234ENST00000567946 NUP153P49790 1475 aaKnown RBP24.52■■□□□ 1.52
PKD1-234ENST00000567946 EPRSP07814 1512 aaKnown RBP24.51■■□□□ 1.51
PKD1-234ENST00000567946 EHBP1L1Q8N3D4 1523 aa24.51■■□□□ 1.51
PKD1-234ENST00000567946 DNAJC5Q9H3Z4 198 aa24.5■■□□□ 1.51
PKD1-234ENST00000567946 ABCA8O94911 1581 aa24.5■■□□□ 1.51
PKD1-234ENST00000567946 PTPRGP23470 1445 aa24.5■■□□□ 1.51
PKD1-234ENST00000567946 CDK13Q14004 1512 aaKnown RBP24.48■■□□□ 1.51
PKD1-234ENST00000567946 MAGI3Q5TCQ9 1506 aa24.48■■□□□ 1.51
PKD1-234ENST00000567946 ARHGEF11O15085 1522 aa24.47■■□□□ 1.51
PKD1-234ENST00000567946 ITGAEP38570 1179 aa24.45■■□□□ 1.5
PKD1-234ENST00000567946 SUPT6HQ7KZ85 1726 aaKnown RBP24.45■■□□□ 1.5
PKD1-234ENST00000567946 RIMBP3CA6NJZ7 1639 aa24.45■■□□□ 1.5
PKD1-234ENST00000567946 RIMBP3BA6NNM3 1639 aa24.45■■□□□ 1.5
PKD1-234ENST00000567946 RIMBP3Q9UFD9 1639 aa24.45■■□□□ 1.5
PKD1-234ENST00000567946 ARID3CA6NKF2 412 aa24.45■■□□□ 1.5
PKD1-234ENST00000567946 NCOA2Q15596 1464 aa24.44■■□□□ 1.5
PKD1-234ENST00000567946 FAM50AQ14320 339 aaKnown RBP24.42■■□□□ 1.5
PKD1-234ENST00000567946 FGD6Q6ZV73 1430 aa24.41■■□□□ 1.5
PKD1-234ENST00000567946 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.38■■□□□ 1.49
PKD1-234ENST00000567946 UACAQ9BZF9 1416 aa24.37■■□□□ 1.49
PKD1-234ENST00000567946 MYOM3Q5VTT5 1437 aa24.36■■□□□ 1.49
PKD1-234ENST00000567946 ATP10BO94823 1461 aa24.34■■□□□ 1.49
PKD1-234ENST00000567946 CYB5RLQ6IPT4 315 aa24.32■■□□□ 1.48
PKD1-234ENST00000567946 DHX57Q6P158 1386 aaKnown RBP24.31■■□□□ 1.48
PKD1-234ENST00000567946 ABCC2Q92887 1545 aa24.31■■□□□ 1.48
PKD1-234ENST00000567946 RAB3GAP2Q9H2M9 1393 aa24.27■■□□□ 1.48
PKD1-234ENST00000567946 PTPN23Q9H3S7 1636 aa24.26■■□□□ 1.47
PKD1-234ENST00000567946 SETD5Q9C0A6 1442 aa24.26■■□□□ 1.47
PKD1-234ENST00000567946 UHRF1BP1LA0JNW5 1464 aa24.26■■□□□ 1.47
PKD1-234ENST00000567946 ADCY10Q96PN6 1610 aa24.23■■□□□ 1.47
PKD1-234ENST00000567946 CDK11AQ9UQ88 783 aaPredicted RBP24.21■■□□□ 1.47
PKD1-234ENST00000567946 TROQ12816 1431 aaPredicted RBP24.21■■□□□ 1.47
PKD1-234ENST00000567946 TCOF1Q13428 1488 aaKnown RBP24.2■■□□□ 1.47
PKD1-234ENST00000567946 CLSPNQ9HAW4 1339 aa24.2■■□□□ 1.46
PKD1-234ENST00000567946 PTPRKQ15262 1439 aa24.18■■□□□ 1.46
PKD1-234ENST00000567946 ZCCHC11Q5TAX3 1644 aaKnown RBP24.18■■□□□ 1.46
PKD1-234ENST00000567946 KDM5BQ9UGL1 1544 aa24.18■■□□□ 1.46
PKD1-234ENST00000567946 KIF14Q15058 1648 aa24.17■■□□□ 1.46
PKD1-234ENST00000567946 MIA2Q96PC5 1412 aa24.17■■□□□ 1.46
PKD1-234ENST00000567946 PLEKHD1A6NEE1 506 aa24.15■■□□□ 1.46
PKD1-234ENST00000567946 HFM1A2PYH4 1435 aa24.08■■□□□ 1.45
PKD1-234ENST00000567946 ABCC10Q5T3U5 1492 aa24.07■■□□□ 1.44
PKD1-234ENST00000567946 MAPKBP1O60336 1514 aa24.06■■□□□ 1.44
PKD1-234ENST00000567946 CDC42BPAQ5VT25 1732 aa24.03■■□□□ 1.44
PKD1-234ENST00000567946 NAIPQ13075 1403 aa24.03■■□□□ 1.44
PKD1-234ENST00000567946 ITSN2Q9NZM3 1697 aa24.02■■□□□ 1.44
PKD1-234ENST00000567946 GPATCH8Q9UKJ3 1502 aaKnown RBP24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms