RNA–Protein interactions for RNA: ENST00000567946.1

PKD1-234, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,822 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-234ENST00000567946 NISCHQ9Y2I1 1504 aa36.59■■■■□ 3.45
PKD1-234ENST00000567946 CCDC180Q9P1Z9 1646 aa32■■■□□ 2.71
PKD1-234ENST00000567946 ZCCHC6Q5VYS8 1495 aaKnown RBP30.68■■■□□ 2.5
PKD1-234ENST00000567946 ABCC9O60706 1549 aa30.66■■■□□ 2.5
PKD1-234ENST00000567946 DCAF1Q9Y4B6 1507 aa30.23■■■□□ 2.43
PKD1-234ENST00000567946 DCAF8L2P0C7V8 631 aa30.22■■■□□ 2.43
PKD1-234ENST00000567946 SHROOM4Q9ULL8 1493 aa29.97■■■□□ 2.39
PKD1-234ENST00000567946 MYO15BQ96JP2 1530 aa29.95■■■□□ 2.39
PKD1-234ENST00000567946 NACADO15069 1562 aa29.83■■■□□ 2.37
PKD1-234ENST00000567946 RB1CC1Q8TDY2 1594 aa29.62■■■□□ 2.33
PKD1-234ENST00000567946 SCRIBQ14160 1630 aa29.4■■■□□ 2.3
PKD1-234ENST00000567946 UNC13AQ9UPW8 1703 aa29.18■■■□□ 2.26
PKD1-234ENST00000567946 SUPT5HO00267 1087 aaKnown RBP28.95■■■□□ 2.23
PKD1-234ENST00000567946 BICRAQ9NZM4 1560 aa28.84■■■□□ 2.21
PKD1-234ENST00000567946 PABPN1Q86U42 306 aaKnown RBP eCLIP28.81■■■□□ 2.2
PKD1-234ENST00000567946 CECR2Q9BXF3 1484 aa28.49■■■□□ 2.15
PKD1-234ENST00000567946 RSF1Q96T23 1441 aaPredicted RBP28.32■■■□□ 2.12
PKD1-234ENST00000567946 MROH2BQ7Z745 1585 aa28.28■■■□□ 2.12
PKD1-234ENST00000567946 BAZ1AQ9NRL2 1556 aaPredicted RBP28.23■■■□□ 2.11
PKD1-234ENST00000567946 SMARCA4P51532 1647 aa28.18■■■□□ 2.1
PKD1-234ENST00000567946 WIZO95785 1651 aa28.06■■■□□ 2.08
PKD1-234ENST00000567946 EIF4G1Q04637 1599 aaKnown RBP27.94■■■□□ 2.06
PKD1-234ENST00000567946 PEG3Q9GZU2 1588 aa27.85■■■□□ 2.05
PKD1-234ENST00000567946 CHIC1Q5VXU3 224 aa27.84■■■□□ 2.05
PKD1-234ENST00000567946 DNAJC5BQ9UF47 199 aa27.8■■■□□ 2.04
PKD1-234ENST00000567946 ATAD2BQ9ULI0 1458 aa27.77■■■□□ 2.04
PKD1-234ENST00000567946 SMARCA2P51531 1590 aa27.7■■■□□ 2.03
PKD1-234ENST00000567946 CC2D2AQ9P2K1 1620 aa27.69■■■□□ 2.02
PKD1-234ENST00000567946 TOP2AP11388 1531 aaKnown RBP27.69■■■□□ 2.02
PKD1-234ENST00000567946 NCAPD3P42695 1498 aa27.56■■■□□ 2
PKD1-234ENST00000567946 BAZ1BQ9UIG0 1483 aaKnown RBP27.55■■■□□ 2
PKD1-234ENST00000567946 HMGXB3Q12766 1538 aa27.49■■□□□ 1.99
PKD1-234ENST00000567946 CCDC88BA6NC98 1476 aa27.44■■□□□ 1.98
PKD1-234ENST00000567946 TRIM41Q8WV44 630 aa27.14■■□□□ 1.94
PKD1-234ENST00000567946 ABCC8Q09428 1581 aa26.9■■□□□ 1.9
PKD1-234ENST00000567946 CFTRP13569 1480 aa26.89■■□□□ 1.89
PKD1-234ENST00000567946 LOC105371045A0A1W2PR82 267 aa26.83■■□□□ 1.89
PKD1-234ENST00000567946 CADPSQ9ULU8 1353 aa26.82■■□□□ 1.88
PKD1-234ENST00000567946 PRDM2Q13029 1718 aa26.78■■□□□ 1.88
PKD1-234ENST00000567946 FAM9AQ8IZU1 332 aaPredicted RBP26.74■■□□□ 1.87
PKD1-234ENST00000567946 NESP48681 1621 aa26.72■■□□□ 1.87
PKD1-234ENST00000567946 LAMC3Q9Y6N6 1575 aa26.64■■□□□ 1.86
PKD1-234ENST00000567946 WRNQ14191 1432 aaPredicted RBP eCLIP26.64■■□□□ 1.85
PKD1-234ENST00000567946 SYNJ1O43426 1573 aa26.56■■□□□ 1.84
PKD1-234ENST00000567946 FANCD2Q9BXW9 1451 aa26.52■■□□□ 1.84
PKD1-234ENST00000567946 CUX1P39880 1505 aa26.45■■□□□ 1.83
PKD1-234ENST00000567946 SOGA1O94964 1423 aa26.45■■□□□ 1.83
PKD1-234ENST00000567946 TOP2BQ02880 1626 aa26.45■■□□□ 1.82
PKD1-234ENST00000567946 BIVM-ERCC5R4GMW8 1640 aa26.44■■□□□ 1.82
PKD1-234ENST00000567946 EHMT2Q96KQ7 1210 aa26.42■■□□□ 1.82
PKD1-234ENST00000567946 KIF21AQ7Z4S6 1674 aa26.41■■□□□ 1.82
PKD1-234ENST00000567946 PDS5BQ9NTI5 1447 aa26.4■■□□□ 1.82
PKD1-234ENST00000567946 EEA1Q15075 1411 aa26.36■■□□□ 1.81
PKD1-234ENST00000567946 CEP164Q9UPV0 1460 aa26.35■■□□□ 1.81
PKD1-234ENST00000567946 RUSC2Q8N2Y8 1516 aa26.35■■□□□ 1.81
PKD1-234ENST00000567946 ERCC6Q03468 1493 aa26.31■■□□□ 1.8
PKD1-234ENST00000567946 DNMBPQ6XZF7 1577 aa26.25■■□□□ 1.79
PKD1-234ENST00000567946 URB2Q14146 1524 aaKnown RBP26.24■■□□□ 1.79
PKD1-234ENST00000567946 TOPBP1Q92547 1522 aa26.23■■□□□ 1.79
PKD1-234ENST00000567946 CSRNP3Q8WYN3 585 aa26.23■■□□□ 1.79
PKD1-234ENST00000567946 FGD5Q6ZNL6 1462 aa26.17■■□□□ 1.78
PKD1-234ENST00000567946 MRC2Q9UBG0 1479 aa26.1■■□□□ 1.77
PKD1-234ENST00000567946 POLA1P09884 1462 aaPredicted RBP26.09■■□□□ 1.77
PKD1-234ENST00000567946 GOLGA3Q08378 1498 aa26.07■■□□□ 1.76
PKD1-234ENST00000567946 THOC2Q8NI27 1593 aaKnown RBP26.07■■□□□ 1.76
PKD1-234ENST00000567946 KIF21BO75037 1637 aa26.04■■□□□ 1.76
PKD1-234ENST00000567946 TNIKQ9UKE5 1360 aa26.03■■□□□ 1.76
PKD1-234ENST00000567946 RAD54L2Q9Y4B4 1467 aa26.02■■□□□ 1.76
PKD1-234ENST00000567946 WDR62O43379 1518 aa26.01■■□□□ 1.75
PKD1-234ENST00000567946 UBTFP17480 764 aaKnown RBP25.95■■□□□ 1.75
PKD1-234ENST00000567946 CEP162Q5TB80 1403 aa25.95■■□□□ 1.75
PKD1-234ENST00000567946 CUX2O14529 1486 aa25.93■■□□□ 1.74
PKD1-234ENST00000567946 ABCA10Q8WWZ4 1543 aa25.93■■□□□ 1.74
PKD1-234ENST00000567946 PCGF6Q9BYE7 350 aa25.93■■□□□ 1.74
PKD1-234ENST00000567946 KIF27Q86VH2 1401 aa25.92■■□□□ 1.74
PKD1-234ENST00000567946 WDR97A6NE52 1622 aa25.92■■□□□ 1.74
PKD1-234ENST00000567946 RAPGEF2Q9Y4G8 1499 aa25.9■■□□□ 1.74
PKD1-234ENST00000567946 TARBP1Q13395 1621 aaKnown RBP25.89■■□□□ 1.74
PKD1-234ENST00000567946 PRXQ9BXM0 1461 aa25.83■■□□□ 1.73
PKD1-234ENST00000567946 ERICH3Q5RHP9 1530 aa25.8■■□□□ 1.72
PKD1-234ENST00000567946 IGF1RP08069 1367 aa25.78■■□□□ 1.72
PKD1-234ENST00000567946 TRIM26Q12899 539 aaPredicted RBP25.78■■□□□ 1.72
PKD1-234ENST00000567946 ABCA5Q8WWZ7 1642 aa25.77■■□□□ 1.72
PKD1-234ENST00000567946 TDRD9Q8NDG6 1382 aaKnown RBP25.76■■□□□ 1.71
PKD1-234ENST00000567946 IFT140Q96RY7 1462 aa25.73■■□□□ 1.71
PKD1-234ENST00000567946 GAPVD1Q14C86 1478 aa25.69■■□□□ 1.7
PKD1-234ENST00000567946 ZNF608Q9ULD9 1512 aaPredicted RBP25.68■■□□□ 1.7
PKD1-234ENST00000567946 CLIP1P30622 1438 aa25.67■■□□□ 1.7
PKD1-234ENST00000567946 AQRO60306 1485 aaKnown RBP eCLIP25.65■■□□□ 1.71e-6■■■■■ 50
PKD1-234ENST00000567946 CARMIL1Q5VZK9 1371 aa25.61■■□□□ 1.69
PKD1-234ENST00000567946 PBRM1Q86U86 1689 aa25.61■■□□□ 1.69
PKD1-234ENST00000567946 PPARGC1BQ86YN6 1023 aaKnown RBP25.6■■□□□ 1.69
PKD1-234ENST00000567946 EIF4G3O43432 1585 aaKnown RBP25.57■■□□□ 1.68
PKD1-234ENST00000567946 CUL7Q14999 1698 aa25.57■■□□□ 1.68
PKD1-234ENST00000567946 RANGAP1P46060 587 aaPredicted RBP25.53■■□□□ 1.68
PKD1-234ENST00000567946 GRIN2BQ13224 1484 aa25.5■■□□□ 1.67
PKD1-234ENST00000567946 VPS8Q8N3P4 1428 aa25.48■■□□□ 1.67
PKD1-234ENST00000567946 ADAMTS12P58397 1594 aa25.43■■□□□ 1.66
PKD1-234ENST00000567946 ARAP1Q96P48 1450 aa25.41■■□□□ 1.66
PKD1-234ENST00000567946 HRCP23327 699 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms