RNA–Protein interactions for RNA: ENST00000565809.5

RPUSD1-207, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2 BASIC

Gene RPUSD1, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-207ENST00000565809 AQRO60306 1485 aaKnown RBP eCLIP37.13■■■■□ 3.538e-8■■■■■ 39.5
RPUSD1-207ENST00000565809 HNRNPUL2Q1KMD3 747 aaKnown RBP37.05■■■■□ 3.52
RPUSD1-207ENST00000565809 EIF4G3O43432 1585 aaKnown RBP37■■■■□ 3.51
RPUSD1-207ENST00000565809 PBRM1Q86U86 1689 aa36.98■■■■□ 3.51
RPUSD1-207ENST00000565809 GRIN2BQ13224 1484 aa36.96■■■■□ 3.51
RPUSD1-207ENST00000565809 CUL7Q14999 1698 aa36.96■■■■□ 3.51
RPUSD1-207ENST00000565809 MAP3K1Q13233 1512 aa36.92■■■■□ 3.5
RPUSD1-207ENST00000565809 KANK4Q5T7N3 995 aaPredicted RBP36.9■■■■□ 3.5
RPUSD1-207ENST00000565809 RRBP1Q9P2E9 1410 aaKnown RBP36.89■■■■□ 3.5
RPUSD1-207ENST00000565809 FHAD1B1AJZ9 1412 aa36.79■■■■□ 3.48
RPUSD1-207ENST00000565809 TIAM1Q13009 1591 aa36.78■■■■□ 3.48
RPUSD1-207ENST00000565809 SNAPC4Q5SXM2 1469 aa36.77■■■■□ 3.48
RPUSD1-207ENST00000565809 ADAMTS12P58397 1594 aa36.77■■■■□ 3.48
RPUSD1-207ENST00000565809 EFCAB5A4FU69 1503 aa36.74■■■■□ 3.47
RPUSD1-207ENST00000565809 CTTNBP2Q8WZ74 1663 aa36.72■■■■□ 3.47
RPUSD1-207ENST00000565809 CLSPNQ9HAW4 1339 aa36.72■■■■□ 3.47
RPUSD1-207ENST00000565809 MAGI1Q96QZ7 1491 aaPredicted RBP36.69■■■■□ 3.46
RPUSD1-207ENST00000565809 CCNB3Q8WWL7 1395 aa36.68■■■■□ 3.46
RPUSD1-207ENST00000565809 DIEXFQ68CQ4 756 aaKnown RBP36.65■■■■□ 3.46
RPUSD1-207ENST00000565809 CFAP43Q8NDM7 1665 aa36.63■■■■□ 3.45
RPUSD1-207ENST00000565809 ZNF316A6NFI3 1004 aaPredicted RBP36.61■■■■□ 3.45
RPUSD1-207ENST00000565809 LRRC9Q6ZRR7 1453 aa36.6■■■■□ 3.45
RPUSD1-207ENST00000565809 PCF11O94913 1555 aaKnown RBP36.57■■■■□ 3.44
RPUSD1-207ENST00000565809 SYNJ2O15056 1496 aa36.56■■■■□ 3.44
RPUSD1-207ENST00000565809 FYCO1Q9BQS8 1478 aa36.54■■■■□ 3.44
RPUSD1-207ENST00000565809 CHMP7Q8WUX9 453 aaPredicted RBP36.53■■■■□ 3.44
RPUSD1-207ENST00000565809 DHX57Q6P158 1386 aaKnown RBP36.52■■■■□ 3.44
RPUSD1-207ENST00000565809 GRIN2AQ12879 1464 aa36.5■■■■□ 3.43
RPUSD1-207ENST00000565809 FBLN2P98095 1184 aa36.49■■■■□ 3.43
RPUSD1-207ENST00000565809 CASKIN1Q8WXD9 1431 aa36.47■■■■□ 3.43
RPUSD1-207ENST00000565809 FHOD3Q2V2M9 1422 aa36.46■■■■□ 3.43
RPUSD1-207ENST00000565809 FMN1Q68DA7 1419 aa36.42■■■■□ 3.42
RPUSD1-207ENST00000565809 P3H3Q8IVL6 736 aa36.38■■■■□ 3.41
RPUSD1-207ENST00000565809 SAMD9Q5K651 1589 aa36.36■■■■□ 3.41
RPUSD1-207ENST00000565809 PHLDB1Q86UU1 1377 aa36.32■■■■□ 3.4
RPUSD1-207ENST00000565809 CEP170Q5SW79 1584 aa36.28■■■■□ 3.4
RPUSD1-207ENST00000565809 CHD1O14646 1710 aa36.28■■■■□ 3.4
RPUSD1-207ENST00000565809 NUP160Q12769 1436 aa36.26■■■■□ 3.39
RPUSD1-207ENST00000565809 KIAA0586Q9BVV6 1533 aa36.25■■■■□ 3.39
RPUSD1-207ENST00000565809 IQGAP2Q13576 1575 aa36.25■■■■□ 3.39
RPUSD1-207ENST00000565809 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.22■■■■□ 3.39
RPUSD1-207ENST00000565809 ATP1B4Q9UN42 357 aaPredicted RBP36.22■■■■□ 3.39
RPUSD1-207ENST00000565809 ITGAEP38570 1179 aa36.19■■■■□ 3.38
RPUSD1-207ENST00000565809 RAB3GAP2Q9H2M9 1393 aa36.18■■■■□ 3.38
RPUSD1-207ENST00000565809 SETD5Q9C0A6 1442 aa36.17■■■■□ 3.38
RPUSD1-207ENST00000565809 FAM50AQ14320 339 aaKnown RBP36.08■■■■□ 3.37
RPUSD1-207ENST00000565809 UGGT2Q9NYU1 1516 aa36.08■■■■□ 3.37
RPUSD1-207ENST00000565809 CENPBP07199 599 aaPredicted RBP36.07■■■■□ 3.36
RPUSD1-207ENST00000565809 LRRIQ1Q96JM4 1722 aa36.04■■■■□ 3.36
RPUSD1-207ENST00000565809 ACIN1Q9UKV3 1341 aaKnown RBP36.03■■■■□ 3.36
RPUSD1-207ENST00000565809 MTUS2Q5JR59 1369 aa36.03■■■■□ 3.36
RPUSD1-207ENST00000565809 JPH4Q96JJ6 628 aa36■■■■□ 3.35
RPUSD1-207ENST00000565809 FGD6Q6ZV73 1430 aa35.99■■■■□ 3.35
RPUSD1-207ENST00000565809 MAPKBP1O60336 1514 aa35.98■■■■□ 3.35
RPUSD1-207ENST00000565809 SCAF1Q9H7N4 1312 aaKnown RBP35.98■■■■□ 3.35
RPUSD1-207ENST00000565809 EHBP1L1Q8N3D4 1523 aa35.97■■■■□ 3.35
RPUSD1-207ENST00000565809 CCDC18Q5T9S5 1454 aa35.96■■■■□ 3.35
RPUSD1-207ENST00000565809 SUPT6HQ7KZ85 1726 aaKnown RBP35.95■■■■□ 3.35
RPUSD1-207ENST00000565809 DISP1Q96F81 1524 aa35.93■■■■□ 3.34
RPUSD1-207ENST00000565809 KIAA0556O60303 1618 aa35.89■■■■□ 3.34
RPUSD1-207ENST00000565809 HECW1Q76N89 1606 aa35.89■■■■□ 3.34
RPUSD1-207ENST00000565809 NCOA2Q15596 1464 aa35.87■■■■□ 3.33
RPUSD1-207ENST00000565809 CLASP1Q7Z460 1538 aa35.87■■■■□ 3.33
RPUSD1-207ENST00000565809 NEUROD1Q13562 356 aa35.85■■■■□ 3.33
RPUSD1-207ENST00000565809 MYOM3Q5VTT5 1437 aa35.85■■■■□ 3.33
RPUSD1-207ENST00000565809 CARMIL2Q6F5E8 1435 aa35.82■■■■□ 3.33
RPUSD1-207ENST00000565809 MIER1Q8N108 512 aa35.81■■■■□ 3.32
RPUSD1-207ENST00000565809 SHROOM2Q13796 1616 aa35.8■■■■□ 3.32
RPUSD1-207ENST00000565809 ARHGEF11O15085 1522 aa35.79■■■■□ 3.32
RPUSD1-207ENST00000565809 PRG4Q92954 1404 aaPredicted RBP35.79■■■■□ 3.32
RPUSD1-207ENST00000565809 OSCARQ8IYS5 282 aa35.77■■■■□ 3.32
RPUSD1-207ENST00000565809 TIMELESSQ9UNS1 1208 aa35.75■■■■□ 3.31
RPUSD1-207ENST00000565809 HFM1A2PYH4 1435 aa35.72■■■■□ 3.31
RPUSD1-207ENST00000565809 EPRSP07814 1512 aaKnown RBP35.7■■■■□ 3.31
RPUSD1-207ENST00000565809 PTPN23Q9H3S7 1636 aa35.7■■■■□ 3.31
RPUSD1-207ENST00000565809 MAGI3Q5TCQ9 1506 aa35.68■■■■□ 3.3
RPUSD1-207ENST00000565809 TCOF1Q13428 1488 aaKnown RBP35.63■■■■□ 3.29
RPUSD1-207ENST00000565809 PTPRKQ15262 1439 aa35.61■■■■□ 3.29
RPUSD1-207ENST00000565809 ERCC6L2Q5T890 1561 aa35.6■■■■□ 3.29
RPUSD1-207ENST00000565809 UACAQ9BZF9 1416 aa35.58■■■■□ 3.29
RPUSD1-207ENST00000565809 MIA2Q96PC5 1412 aa35.55■■■■□ 3.28
RPUSD1-207ENST00000565809 NAIPQ13075 1403 aa35.55■■■■□ 3.28
RPUSD1-207ENST00000565809 CDK13Q14004 1512 aaKnown RBP35.52■■■■□ 3.28
RPUSD1-207ENST00000565809 PTPRGP23470 1445 aa35.52■■■■□ 3.28
RPUSD1-207ENST00000565809 SIN3AQ96ST3 1273 aa35.51■■■■□ 3.27
RPUSD1-207ENST00000565809 RAPGEF6Q8TEU7 1601 aa35.49■■■■□ 3.27
RPUSD1-207ENST00000565809 PLB1Q6P1J6 1458 aa35.49■■■■□ 3.27
RPUSD1-207ENST00000565809 AKNAQ7Z591 1439 aa35.48■■■■□ 3.27
RPUSD1-207ENST00000565809 GCC2Q8IWJ2 1684 aa35.47■■■■□ 3.27
RPUSD1-207ENST00000565809 YTHDC1Q96MU7 727 aaKnown RBP35.47■■■■□ 3.27
RPUSD1-207ENST00000565809 GTF3C3Q9Y5Q9 886 aa35.45■■■■□ 3.27
RPUSD1-207ENST00000565809 ABCA8O94911 1581 aa35.4■■■■□ 3.26
RPUSD1-207ENST00000565809 NUP153P49790 1475 aaKnown RBP35.4■■■■□ 3.26
RPUSD1-207ENST00000565809 ARID3CA6NKF2 412 aa35.38■■■■□ 3.25
RPUSD1-207ENST00000565809 PPP1R15AO75807 674 aaPredicted RBP35.36■■■■□ 3.25
RPUSD1-207ENST00000565809 CDK11AQ9UQ88 783 aaPredicted RBP35.34■■■■□ 3.25
RPUSD1-207ENST00000565809 TONSLQ96HA7 1378 aa35.31■■■■□ 3.24
RPUSD1-207ENST00000565809 ROCK1Q13464 1354 aa35.21■■■■□ 3.23
RPUSD1-207ENST00000565809 RRP7BPQ9NSQ0 103 aa35.2■■■■□ 3.23
RPUSD1-207ENST00000565809 DNMT1P26358 1616 aaKnown RBP35.2■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms