RNA–Protein interactions for RNA: ENST00000565639.6

PKD1-230, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,976 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-230ENST00000565639 ARAP1Q96P48 1450 aa30.31■■■□□ 2.44
PKD1-230ENST00000565639 SYNJ2O15056 1496 aa30.25■■■□□ 2.43
PKD1-230ENST00000565639 GRIN2AQ12879 1464 aa30.23■■■□□ 2.43
PKD1-230ENST00000565639 EFCAB5A4FU69 1503 aa30.23■■■□□ 2.43
PKD1-230ENST00000565639 CHMP7Q8WUX9 453 aaPredicted RBP30.15■■■□□ 2.42
PKD1-230ENST00000565639 IQGAP2Q13576 1575 aa30.14■■■□□ 2.42
PKD1-230ENST00000565639 KIAA0586Q9BVV6 1533 aa30.11■■■□□ 2.41
PKD1-230ENST00000565639 TRIM26Q12899 539 aaPredicted RBP30.1■■■□□ 2.41
PKD1-230ENST00000565639 SAMD9Q5K651 1589 aa30.1■■■□□ 2.41
PKD1-230ENST00000565639 NUP160Q12769 1436 aa30.04■■■□□ 2.4
PKD1-230ENST00000565639 APLP2Q06481 763 aa30.03■■■□□ 2.4
PKD1-230ENST00000565639 FBLN2P98095 1184 aa30.02■■■□□ 2.4
PKD1-230ENST00000565639 CEP170Q5SW79 1584 aa30.02■■■□□ 2.4
PKD1-230ENST00000565639 UGGT2Q9NYU1 1516 aa30.01■■■□□ 2.4
PKD1-230ENST00000565639 FHOD3Q2V2M9 1422 aa30.01■■■□□ 2.4
PKD1-230ENST00000565639 PPARGC1BQ86YN6 1023 aaKnown RBP30■■■□□ 2.39
PKD1-230ENST00000565639 PCGF6Q9BYE7 350 aa29.99■■■□□ 2.39
PKD1-230ENST00000565639 P3H3Q8IVL6 736 aa29.99■■■□□ 2.39
PKD1-230ENST00000565639 FMN1Q68DA7 1419 aa29.95■■■□□ 2.38
PKD1-230ENST00000565639 CHD1O14646 1710 aa29.89■■■□□ 2.38
PKD1-230ENST00000565639 MAP3K1Q13233 1512 aa29.88■■■□□ 2.37
PKD1-230ENST00000565639 CASKIN1Q8WXD9 1431 aa29.87■■■□□ 2.37
PKD1-230ENST00000565639 PCF11O94913 1555 aaKnown RBP29.87■■■□□ 2.37
PKD1-230ENST00000565639 FYCO1Q9BQS8 1478 aa29.87■■■□□ 2.37
PKD1-230ENST00000565639 DISP1Q96F81 1524 aa29.84■■■□□ 2.37
PKD1-230ENST00000565639 KIAA0556O60303 1618 aa29.83■■■□□ 2.37
PKD1-230ENST00000565639 TIAM1Q13009 1591 aa29.78■■■□□ 2.36
PKD1-230ENST00000565639 JPH4Q96JJ6 628 aa29.77■■■□□ 2.36
PKD1-230ENST00000565639 TTBK1Q5TCY1 1321 aaPredicted RBP29.77■■■□□ 2.36
PKD1-230ENST00000565639 CFAP43Q8NDM7 1665 aa29.73■■■□□ 2.35
PKD1-230ENST00000565639 CARMIL2Q6F5E8 1435 aa29.73■■■□□ 2.35
PKD1-230ENST00000565639 KANK4Q5T7N3 995 aaPredicted RBP29.72■■■□□ 2.35
PKD1-230ENST00000565639 ATP1B4Q9UN42 357 aaPredicted RBP29.66■■■□□ 2.34
PKD1-230ENST00000565639 LRRC9Q6ZRR7 1453 aa29.65■■■□□ 2.34
PKD1-230ENST00000565639 SHROOM2Q13796 1616 aa29.63■■■□□ 2.33
PKD1-230ENST00000565639 HECW1Q76N89 1606 aa29.63■■■□□ 2.33
PKD1-230ENST00000565639 CLASP1Q7Z460 1538 aa29.59■■■□□ 2.33
PKD1-230ENST00000565639 CCDC18Q5T9S5 1454 aa29.59■■■□□ 2.33
PKD1-230ENST00000565639 PRG4Q92954 1404 aaPredicted RBP29.58■■■□□ 2.33
PKD1-230ENST00000565639 LRRIQ1Q96JM4 1722 aa29.58■■■□□ 2.33
PKD1-230ENST00000565639 RAPGEF6Q8TEU7 1601 aa29.53■■■□□ 2.32
PKD1-230ENST00000565639 EPRSP07814 1512 aaKnown RBP29.51■■■□□ 2.31
PKD1-230ENST00000565639 NUP153P49790 1475 aaKnown RBP29.45■■■□□ 2.31
PKD1-230ENST00000565639 MTUS2Q5JR59 1369 aa29.45■■■□□ 2.3
PKD1-230ENST00000565639 RRBP1Q9P2E9 1410 aaKnown RBP29.44■■■□□ 2.3
PKD1-230ENST00000565639 PLB1Q6P1J6 1458 aa29.43■■■□□ 2.3
PKD1-230ENST00000565639 EHBP1L1Q8N3D4 1523 aa29.42■■■□□ 2.3
PKD1-230ENST00000565639 ABCA8O94911 1581 aa29.41■■■□□ 2.3
PKD1-230ENST00000565639 PTPRGP23470 1445 aa29.41■■■□□ 2.3
PKD1-230ENST00000565639 CDK13Q14004 1512 aaKnown RBP29.39■■■□□ 2.3
PKD1-230ENST00000565639 PHLDB1Q86UU1 1377 aa29.35■■■□□ 2.29
PKD1-230ENST00000565639 MAGI3Q5TCQ9 1506 aa29.35■■■□□ 2.29
PKD1-230ENST00000565639 ERCC6L2Q5T890 1561 aa29.34■■■□□ 2.29
PKD1-230ENST00000565639 CCNB3Q8WWL7 1395 aa29.33■■■□□ 2.29
PKD1-230ENST00000565639 SUPT6HQ7KZ85 1726 aaKnown RBP29.33■■■□□ 2.29
PKD1-230ENST00000565639 OSCARQ8IYS5 282 aa29.32■■■□□ 2.28
PKD1-230ENST00000565639 NCOA2Q15596 1464 aa29.29■■■□□ 2.28
PKD1-230ENST00000565639 CDK11AQ9UQ88 783 aaPredicted RBP29.28■■■□□ 2.28
PKD1-230ENST00000565639 ARHGEF11O15085 1522 aa29.27■■■□□ 2.28
PKD1-230ENST00000565639 ARID3CA6NKF2 412 aa29.26■■■□□ 2.27
PKD1-230ENST00000565639 UACAQ9BZF9 1416 aa29.25■■■□□ 2.27
PKD1-230ENST00000565639 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.21■■■□□ 2.27
PKD1-230ENST00000565639 HNRNPUL2Q1KMD3 747 aaKnown RBP29.21■■■□□ 2.27
PKD1-230ENST00000565639 ATP10BO94823 1461 aa29.2■■■□□ 2.27
PKD1-230ENST00000565639 MYOM3Q5VTT5 1437 aa29.19■■■□□ 2.26
PKD1-230ENST00000565639 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.18■■■□□ 2.26
PKD1-230ENST00000565639 TROQ12816 1431 aaPredicted RBP29.18■■■□□ 2.26
PKD1-230ENST00000565639 FGD6Q6ZV73 1430 aa29.18■■■□□ 2.26
PKD1-230ENST00000565639 ABCC2Q92887 1545 aa29.17■■■□□ 2.26
PKD1-230ENST00000565639 UHRF1BP1LA0JNW5 1464 aa29.13■■■□□ 2.25
PKD1-230ENST00000565639 HRCP23327 699 aa29.12■■■□□ 2.25
PKD1-230ENST00000565639 ADCY10Q96PN6 1610 aa29.1■■■□□ 2.25
PKD1-230ENST00000565639 PLEKHD1A6NEE1 506 aa29.08■■■□□ 2.25
PKD1-230ENST00000565639 FAM50AQ14320 339 aaKnown RBP29.06■■■□□ 2.24
PKD1-230ENST00000565639 MIA2Q96PC5 1412 aa29.05■■■□□ 2.24
PKD1-230ENST00000565639 PTPN23Q9H3S7 1636 aa29.01■■■□□ 2.24
PKD1-230ENST00000565639 TCOF1Q13428 1488 aaKnown RBP29.01■■■□□ 2.23
PKD1-230ENST00000565639 KDM5BQ9UGL1 1544 aa29■■■□□ 2.23
PKD1-230ENST00000565639 KIF14Q15058 1648 aa28.99■■■□□ 2.23
PKD1-230ENST00000565639 ITGAEP38570 1179 aa28.95■■■□□ 2.22
PKD1-230ENST00000565639 ITSN2Q9NZM3 1697 aa28.94■■■□□ 2.22
PKD1-230ENST00000565639 ZCCHC11Q5TAX3 1644 aaKnown RBP28.94■■■□□ 2.22
PKD1-230ENST00000565639 ABCC10Q5T3U5 1492 aa28.93■■■□□ 2.22
PKD1-230ENST00000565639 GPATCH8Q9UKJ3 1502 aaKnown RBP28.91■■■□□ 2.22
PKD1-230ENST00000565639 ZEB1P37275 1124 aaPredicted RBP28.89■■■□□ 2.22
PKD1-230ENST00000565639 CCER1Q8TC90 406 aaPredicted RBP28.88■■■□□ 2.21
PKD1-230ENST00000565639 CDC42BPAQ5VT25 1732 aa28.83■■■□□ 2.2
PKD1-230ENST00000565639 CFDP1Q9UEE9 299 aaPredicted RBP28.82■■■□□ 2.2
PKD1-230ENST00000565639 PTPRKQ15262 1439 aa28.8■■■□□ 2.2
PKD1-230ENST00000565639 SETD5Q9C0A6 1442 aa28.8■■■□□ 2.2
PKD1-230ENST00000565639 CAMSAP2Q08AD1 1489 aa28.76■■■□□ 2.19
PKD1-230ENST00000565639 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.75■■■□□ 2.19
PKD1-230ENST00000565639 DNMT1P26358 1616 aaKnown RBP28.74■■■□□ 2.19
PKD1-230ENST00000565639 RAB3GAP2Q9H2M9 1393 aa28.74■■■□□ 2.19
PKD1-230ENST00000565639 ZNF644Q9H582 1327 aaPredicted RBP28.73■■■□□ 2.19
PKD1-230ENST00000565639 PREX2Q70Z35 1606 aa28.73■■■□□ 2.19
PKD1-230ENST00000565639 TTC37Q6PGP7 1564 aa28.72■■■□□ 2.19
PKD1-230ENST00000565639 HFM1A2PYH4 1435 aa28.72■■■□□ 2.19
PKD1-230ENST00000565639 WDR7Q9Y4E6 1490 aa28.71■■■□□ 2.19
PKD1-230ENST00000565639 DAPK1P53355 1430 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms