RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 JPH4Q96JJ6 628 aa26.06■■□□□ 1.76
COMMD4-212ENST00000565517 RAPGEF2Q9Y4G8 1499 aa26.03■■□□□ 1.76
COMMD4-212ENST00000565517 ERCC6L2Q5T890 1561 aa26.03■■□□□ 1.76
COMMD4-212ENST00000565517 PRG4Q92954 1404 aaPredicted RBP25.99■■□□□ 1.75
COMMD4-212ENST00000565517 CHIC1Q5VXU3 224 aa25.94■■□□□ 1.74
COMMD4-212ENST00000565517 EEA1Q15075 1411 aa25.92■■□□□ 1.74
COMMD4-212ENST00000565517 PRXQ9BXM0 1461 aa25.91■■□□□ 1.74
COMMD4-212ENST00000565517 IQGAP2Q13576 1575 aa25.89■■□□□ 1.73
COMMD4-212ENST00000565517 CSRNP3Q8WYN3 585 aa25.88■■□□□ 1.73
COMMD4-212ENST00000565517 CTTNBP2Q8WZ74 1663 aa25.81■■□□□ 1.72
COMMD4-212ENST00000565517 CARMIL2Q6F5E8 1435 aa25.79■■□□□ 1.72
COMMD4-212ENST00000565517 UGGT2Q9NYU1 1516 aa25.76■■□□□ 1.71
COMMD4-212ENST00000565517 DISP1Q96F81 1524 aa25.7■■□□□ 1.7
COMMD4-212ENST00000565517 TNIKQ9UKE5 1360 aa25.69■■□□□ 1.7
COMMD4-212ENST00000565517 FAM9AQ8IZU1 332 aaPredicted RBP25.69■■□□□ 1.7
COMMD4-212ENST00000565517 PTPRGP23470 1445 aa25.68■■□□□ 1.7
COMMD4-212ENST00000565517 KIF21BO75037 1637 aa25.64■■□□□ 1.7
COMMD4-212ENST00000565517 KIAA0556O60303 1618 aa25.63■■□□□ 1.69
COMMD4-212ENST00000565517 TRHP20396 242 aaPredicted RBP25.63■■□□□ 1.69
COMMD4-212ENST00000565517 GOLGA3Q08378 1498 aa25.61■■□□□ 1.69
COMMD4-212ENST00000565517 ADCY10Q96PN6 1610 aa25.61■■□□□ 1.69
COMMD4-212ENST00000565517 NPM1P06748 294 aaKnown RBP eCLIP25.57■■□□□ 1.68
COMMD4-212ENST00000565517 TTBK1Q5TCY1 1321 aaPredicted RBP25.53■■□□□ 1.68
COMMD4-212ENST00000565517 UHRF1BP1LA0JNW5 1464 aa25.52■■□□□ 1.68
COMMD4-212ENST00000565517 UACAQ9BZF9 1416 aa25.51■■□□□ 1.67
COMMD4-212ENST00000565517 MAPKBP1O60336 1514 aa25.49■■□□□ 1.67
COMMD4-212ENST00000565517 ABCC2Q92887 1545 aa25.47■■□□□ 1.67
COMMD4-212ENST00000565517 SAMD9Q5K651 1589 aa25.46■■□□□ 1.67
COMMD4-212ENST00000565517 KIF13AQ9H1H9 1805 aa25.41■■□□□ 1.66
COMMD4-212ENST00000565517 KDM5BQ9UGL1 1544 aa25.38■■□□□ 1.65
COMMD4-212ENST00000565517 UBTFP17480 764 aaKnown RBP25.38■■□□□ 1.65
COMMD4-212ENST00000565517 ABCA8O94911 1581 aa25.37■■□□□ 1.65
COMMD4-212ENST00000565517 ABCC10Q5T3U5 1492 aa25.37■■□□□ 1.65
COMMD4-212ENST00000565517 PLB1Q6P1J6 1458 aa25.37■■□□□ 1.65
COMMD4-212ENST00000565517 P3H3Q8IVL6 736 aa25.36■■□□□ 1.65
COMMD4-212ENST00000565517 EFCAB5A4FU69 1503 aa25.33■■□□□ 1.65
COMMD4-212ENST00000565517 DIP2BQ9P265 1576 aa25.32■■□□□ 1.64
COMMD4-212ENST00000565517 ZCCHC11Q5TAX3 1644 aaKnown RBP25.32■■□□□ 1.64
COMMD4-212ENST00000565517 EHMT2Q96KQ7 1210 aa25.31■■□□□ 1.64
COMMD4-212ENST00000565517 RANGAP1P46060 587 aaPredicted RBP25.3■■□□□ 1.64
COMMD4-212ENST00000565517 FAM69CQ0P6D2 419 aa25.3■■□□□ 1.64
COMMD4-212ENST00000565517 ASXL2Q76L83 1435 aa25.29■■□□□ 1.64
COMMD4-212ENST00000565517 FHOD3Q2V2M9 1422 aa25.24■■□□□ 1.63
COMMD4-212ENST00000565517 RAPGEF6Q8TEU7 1601 aa25.23■■□□□ 1.63
COMMD4-212ENST00000565517 GLI2P10070 1586 aa25.21■■□□□ 1.63
COMMD4-212ENST00000565517 ARHGAP35Q9NRY4 1499 aa25.16■■□□□ 1.62
COMMD4-212ENST00000565517 WDR7Q9Y4E6 1490 aa25.16■■□□□ 1.62
COMMD4-212ENST00000565517 EPRSP07814 1512 aaKnown RBP25.16■■□□□ 1.62
COMMD4-212ENST00000565517 ATP10BO94823 1461 aa25.15■■□□□ 1.62
COMMD4-212ENST00000565517 TSPOAP1O95153 1857 aa25.13■■□□□ 1.61
COMMD4-212ENST00000565517 NUP153P49790 1475 aaKnown RBP25.11■■□□□ 1.61
COMMD4-212ENST00000565517 FMN1Q68DA7 1419 aa25.1■■□□□ 1.61
COMMD4-212ENST00000565517 MAP3K4Q9Y6R4 1608 aa25.08■■□□□ 1.6
COMMD4-212ENST00000565517 ARID3CA6NKF2 412 aa25.05■■□□□ 1.6
COMMD4-212ENST00000565517 PPRC1Q5VV67 1664 aaKnown RBP25.04■■□□□ 1.6
COMMD4-212ENST00000565517 KCNH8Q96L42 1107 aa25.02■■□□□ 1.6
COMMD4-212ENST00000565517 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.01■■□□□ 1.59
COMMD4-212ENST00000565517 HNRNPUL2Q1KMD3 747 aaKnown RBP25.01■■□□□ 1.59
COMMD4-212ENST00000565517 CFAP43Q8NDM7 1665 aa25.01■■□□□ 1.59
COMMD4-212ENST00000565517 CLIP1P30622 1438 aa24.98■■□□□ 1.59
COMMD4-212ENST00000565517 HECW1Q76N89 1606 aa24.97■■□□□ 1.59
COMMD4-212ENST00000565517 TEX14Q8IWB6 1497 aa24.96■■□□□ 1.59
COMMD4-212ENST00000565517 PLEKHD1A6NEE1 506 aa24.95■■□□□ 1.58
COMMD4-212ENST00000565517 CD109Q6YHK3 1445 aa24.95■■□□□ 1.58
COMMD4-212ENST00000565517 KDM6BO15054 1643 aa24.94■■□□□ 1.58
COMMD4-212ENST00000565517 MAGI3Q5TCQ9 1506 aa24.92■■□□□ 1.58
COMMD4-212ENST00000565517 ABCA9Q8IUA7 1624 aa24.92■■□□□ 1.58
COMMD4-212ENST00000565517 ATP1B4Q9UN42 357 aaPredicted RBP24.9■■□□□ 1.58
COMMD4-212ENST00000565517 CDK13Q14004 1512 aaKnown RBP24.9■■□□□ 1.58
COMMD4-212ENST00000565517 CASKIN1Q8WXD9 1431 aa24.88■■□□□ 1.57
COMMD4-212ENST00000565517 LRRIQ1Q96JM4 1722 aa24.86■■□□□ 1.57
COMMD4-212ENST00000565517 LOC105371045A0A1W2PR82 267 aa24.85■■□□□ 1.57
COMMD4-212ENST00000565517 CEP162Q5TB80 1403 aa24.85■■□□□ 1.57
COMMD4-212ENST00000565517 PCF11O94913 1555 aaKnown RBP24.84■■□□□ 1.57
COMMD4-212ENST00000565517 CDK11AQ9UQ88 783 aaPredicted RBP24.84■■□□□ 1.57
COMMD4-212ENST00000565517 FYCO1Q9BQS8 1478 aa24.82■■□□□ 1.56
COMMD4-212ENST00000565517 CCDC18Q5T9S5 1454 aa24.8■■□□□ 1.56
COMMD4-212ENST00000565517 COL17A1Q9UMD9 1497 aaPredicted RBP24.78■■□□□ 1.56
COMMD4-212ENST00000565517 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.78■■□□□ 1.56
COMMD4-212ENST00000565517 PHLDB1Q86UU1 1377 aa24.77■■□□□ 1.56
COMMD4-212ENST00000565517 TROQ12816 1431 aaPredicted RBP24.74■■□□□ 1.55
COMMD4-212ENST00000565517 NEO1Q92859 1461 aa24.73■■□□□ 1.55
COMMD4-212ENST00000565517 ARAP3Q8WWN8 1544 aa24.72■■□□□ 1.55
COMMD4-212ENST00000565517 TTC37Q6PGP7 1564 aa24.71■■□□□ 1.55
COMMD4-212ENST00000565517 KIF14Q15058 1648 aa24.68■■□□□ 1.54
COMMD4-212ENST00000565517 CFAP74Q9C0B2 1584 aa24.67■■□□□ 1.54
COMMD4-212ENST00000565517 MYO5CQ9NQX4 1742 aa24.64■■□□□ 1.54
COMMD4-212ENST00000565517 PLCH2O75038 1416 aa24.64■■□□□ 1.54
COMMD4-212ENST00000565517 FANCAO15360 1455 aa24.64■■□□□ 1.53
COMMD4-212ENST00000565517 AKNAQ7Z591 1439 aa24.6■■□□□ 1.53
COMMD4-212ENST00000565517 VPS8Q8N3P4 1428 aa24.57■■□□□ 1.52
COMMD4-212ENST00000565517 EFCAB2Q5VUJ9 269 aa24.55■■□□□ 1.52
COMMD4-212ENST00000565517 DENND4BO75064 1496 aaPredicted RBP24.53■■□□□ 1.52
COMMD4-212ENST00000565517 CDC42BPBQ9Y5S2 1711 aa24.53■■□□□ 1.52
COMMD4-212ENST00000565517 RAPGEF3O95398 923 aa24.53■■□□□ 1.52
COMMD4-212ENST00000565517 RICTORQ6R327 1708 aa24.52■■□□□ 1.52
COMMD4-212ENST00000565517 MTUS2Q5JR59 1369 aa24.52■■□□□ 1.52
COMMD4-212ENST00000565517 FRMPD1Q5SYB0 1578 aa24.5■■□□□ 1.51
COMMD4-212ENST00000565517 PREX2Q70Z35 1606 aa24.5■■□□□ 1.51
COMMD4-212ENST00000565517 CDC42BPAQ5VT25 1732 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms