RNA–Protein interactions for RNA: ENST00000565320.1

AC006288.1-201, humanhuman

TSL 3 BASIC

Gene AC006288.1, Length 1,463 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006288.1-201ENST00000565320 SPDYE2Q495Y8 402 aa9.03□□□□□ -0.96
AC006288.1-201ENST00000565320 HMGXB3Q12766 1538 aa9.03□□□□□ -0.96
AC006288.1-201ENST00000565320 NCAPD3P42695 1498 aa9.03□□□□□ -0.96
AC006288.1-201ENST00000565320 GOLGA3Q08378 1498 aa9.03□□□□□ -0.96
AC006288.1-201ENST00000565320 RTN4Q9NQC3 1192 aaKnown RBP9.02□□□□□ -0.97
AC006288.1-201ENST00000565320 SYNJ1O43426 1573 aa9.01□□□□□ -0.97
AC006288.1-201ENST00000565320 MKRN4PQ13434 485 aaPredicted RBP9.01□□□□□ -0.97
AC006288.1-201ENST00000565320 CHRDL2Q6WN34 429 aa9.01□□□□□ -0.97
AC006288.1-201ENST00000565320 RUSC2Q8N2Y8 1516 aa9□□□□□ -0.97
AC006288.1-201ENST00000565320 KIF21BO75037 1637 aa9□□□□□ -0.97
AC006288.1-201ENST00000565320 CEP164Q9UPV0 1460 aa9□□□□□ -0.97
AC006288.1-201ENST00000565320 REM2Q8IYK8 340 aaPredicted RBP8.98□□□□□ -0.97
AC006288.1-201ENST00000565320 TOP2BQ02880 1626 aa8.97□□□□□ -0.97
AC006288.1-201ENST00000565320 UBTFP17480 764 aaKnown RBP8.95□□□□□ -0.98
AC006288.1-201ENST00000565320 BIVM-ERCC5R4GMW8 1640 aa8.95□□□□□ -0.98
AC006288.1-201ENST00000565320 AMER1Q5JTC6 1135 aaPredicted RBP8.94□□□□□ -0.98
AC006288.1-201ENST00000565320 SSUH2Q9Y2M2 353 aa8.93□□□□□ -0.98
AC006288.1-201ENST00000565320 CFTRP13569 1480 aa8.91□□□□□ -0.98
AC006288.1-201ENST00000565320 CLIP1P30622 1438 aa8.89□□□□□ -0.99
AC006288.1-201ENST00000565320 ERICH3Q5RHP9 1530 aa8.89□□□□□ -0.99
AC006288.1-201ENST00000565320 PITPNM1O00562 1244 aa8.88□□□□□ -0.99
AC006288.1-201ENST00000565320 PRXQ9BXM0 1461 aa8.88□□□□□ -0.99
AC006288.1-201ENST00000565320 VPS8Q8N3P4 1428 aa8.87□□□□□ -0.99
AC006288.1-201ENST00000565320 RAPGEF2Q9Y4G8 1499 aa8.87□□□□□ -0.99
AC006288.1-201ENST00000565320 ZNF692Q9BU19 519 aaPredicted RBP8.87□□□□□ -0.99
AC006288.1-201ENST00000565320 CUX1P39880 1505 aa8.86□□□□□ -0.99
AC006288.1-201ENST00000565320 PRDM2Q13029 1718 aa8.84□□□□□ -0.99
AC006288.1-201ENST00000565320 SPDYE1Q8NFV5 336 aaPredicted RBP8.83□□□□□ -1
AC006288.1-201ENST00000565320 KIF27Q86VH2 1401 aa8.83□□□□□ -1
AC006288.1-201ENST00000565320 CCER1Q8TC90 406 aaPredicted RBP8.83□□□□□ -1
AC006288.1-201ENST00000565320 FXR2P51116 673 aaKnown RBP eCLIP8.82□□□□□ -1
AC006288.1-201ENST00000565320 CADPSQ9ULU8 1353 aa8.81□□□□□ -1
AC006288.1-201ENST00000565320 PIP4P2Q8N4L2 257 aa8.81□□□□□ -1
AC006288.1-201ENST00000565320 ARAP1Q96P48 1450 aa8.76□□□□□ -1.01
AC006288.1-201ENST00000565320 SPDYE4A6NLX3 237 aa8.75□□□□□ -1.01
AC006288.1-201ENST00000565320 CC2D2AQ9P2K1 1620 aa8.74□□□□□ -1.01
AC006288.1-201ENST00000565320 TTBK1Q5TCY1 1321 aaPredicted RBP8.73□□□□□ -1.01
AC006288.1-201ENST00000565320 IGF1RP08069 1367 aa8.73□□□□□ -1.01
AC006288.1-201ENST00000565320 SLC24A1O60721 1099 aa8.71□□□□□ -1.01
AC006288.1-201ENST00000565320 CUX2O14529 1486 aa8.71□□□□□ -1.01
AC006288.1-201ENST00000565320 FGD5Q6ZNL6 1462 aa8.7□□□□□ -1.02
AC006288.1-201ENST00000565320 ARHGAP35Q9NRY4 1499 aa8.7□□□□□ -1.02
AC006288.1-201ENST00000565320 CLEC11AQ9Y240 323 aa8.7□□□□□ -1.02
AC006288.1-201ENST00000565320 FANCD2Q9BXW9 1451 aa8.69□□□□□ -1.02
AC006288.1-201ENST00000565320 MAP3K1Q13233 1512 aa8.69□□□□□ -1.02
AC006288.1-201ENST00000565320 CLSPNQ9HAW4 1339 aa8.68□□□□□ -1.02
AC006288.1-201ENST00000565320 CARMIL1Q5VZK9 1371 aa8.68□□□□□ -1.02
AC006288.1-201ENST00000565320 PROM2Q8N271 834 aa8.68□□□□□ -1.02
AC006288.1-201ENST00000565320 RRBP1Q9P2E9 1410 aaKnown RBP8.68□□□□□ -1.02
AC006288.1-201ENST00000565320 DNMBPQ6XZF7 1577 aa8.68□□□□□ -1.02
AC006288.1-201ENST00000565320 ABCA10Q8WWZ4 1543 aa8.67□□□□□ -1.02
AC006288.1-201ENST00000565320 PELP1Q8IZL8 1130 aaKnown RBP8.66□□□□□ -1.02
AC006288.1-201ENST00000565320 TOPBP1Q92547 1522 aa8.64□□□□□ -1.03
AC006288.1-201ENST00000565320 ZNF316A6NFI3 1004 aaPredicted RBP8.64□□□□□ -1.03
AC006288.1-201ENST00000565320 PRKAR2AP13861 404 aaKnown RBP8.64□□□□□ -1.03
AC006288.1-201ENST00000565320 RANGAP1P46060 587 aaPredicted RBP8.64□□□□□ -1.03
AC006288.1-201ENST00000565320 KANK4Q5T7N3 995 aaPredicted RBP8.64□□□□□ -1.03
AC006288.1-201ENST00000565320 DIEXFQ68CQ4 756 aaKnown RBP8.64□□□□□ -1.03
AC006288.1-201ENST00000565320 LAMC3Q9Y6N6 1575 aa8.63□□□□□ -1.03
AC006288.1-201ENST00000565320 PRR29P0C7W0 189 aa8.63□□□□□ -1.03
AC006288.1-201ENST00000565320 FBXO3Q9UK99 471 aa8.63□□□□□ -1.03
AC006288.1-201ENST00000565320 STAG3Q9UJ98 1225 aa8.62□□□□□ -1.03
AC006288.1-201ENST00000565320 FHAD1B1AJZ9 1412 aa8.62□□□□□ -1.03
AC006288.1-201ENST00000565320 POLA1P09884 1462 aaPredicted RBP8.62□□□□□ -1.03
AC006288.1-201ENST00000565320 CCNB3Q8WWL7 1395 aa8.61□□□□□ -1.03
AC006288.1-201ENST00000565320 TIAM1Q13009 1591 aa8.61□□□□□ -1.03
AC006288.1-201ENST00000565320 CUL7Q14999 1698 aa8.61□□□□□ -1.03
AC006288.1-201ENST00000565320 SP7Q8TDD2 431 aaPredicted RBP8.6□□□□□ -1.03
AC006288.1-201ENST00000565320 EFCAB5A4FU69 1503 aa8.59□□□□□ -1.03
AC006288.1-201ENST00000565320 DHX57Q6P158 1386 aaKnown RBP8.59□□□□□ -1.03
AC006288.1-201ENST00000565320 AQRO60306 1485 aaKnown RBP eCLIP8.59□□□□□ -1.04
AC006288.1-201ENST00000565320 RAD54L2Q9Y4B4 1467 aa8.58□□□□□ -1.04
AC006288.1-201ENST00000565320 VASPP50552 380 aaPredicted RBP8.57□□□□□ -1.04
AC006288.1-201ENST00000565320 NESP48681 1621 aa8.57□□□□□ -1.04
AC006288.1-201ENST00000565320 LRRC9Q6ZRR7 1453 aa8.57□□□□□ -1.04
AC006288.1-201ENST00000565320 HAX1O00165 279 aa8.57□□□□□ -1.04
AC006288.1-201ENST00000565320 WDR97A6NE52 1622 aa8.57□□□□□ -1.04
AC006288.1-201ENST00000565320 URB2Q14146 1524 aaKnown RBP8.56□□□□□ -1.04
AC006288.1-201ENST00000565320 PDS5BQ9NTI5 1447 aa8.56□□□□□ -1.04
AC006288.1-201ENST00000565320 CFAP43Q8NDM7 1665 aa8.56□□□□□ -1.04
AC006288.1-201ENST00000565320 FYCO1Q9BQS8 1478 aa8.55□□□□□ -1.04
AC006288.1-201ENST00000565320 CASKIN1Q8WXD9 1431 aa8.55□□□□□ -1.04
AC006288.1-201ENST00000565320 ACIN1Q9UKV3 1341 aaKnown RBP8.54□□□□□ -1.04
AC006288.1-201ENST00000565320 ABCA5Q8WWZ7 1642 aa8.54□□□□□ -1.04
AC006288.1-201ENST00000565320 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.54□□□□□ -1.04
AC006288.1-201ENST00000565320 CTTNBP2Q8WZ74 1663 aa8.53□□□□□ -1.04
AC006288.1-201ENST00000565320 C19orf67A6NJJ6 358 aa8.53□□□□□ -1.04
AC006288.1-201ENST00000565320 CENPBP07199 599 aaPredicted RBP8.53□□□□□ -1.04
AC006288.1-201ENST00000565320 PCF11O94913 1555 aaKnown RBP8.52□□□□□ -1.05
AC006288.1-201ENST00000565320 MYT1Q01538 1121 aa8.52□□□□□ -1.05
AC006288.1-201ENST00000565320 FMN1Q68DA7 1419 aa8.52□□□□□ -1.05
AC006288.1-201ENST00000565320 GAPVD1Q14C86 1478 aa8.51□□□□□ -1.05
AC006288.1-201ENST00000565320 ILDR1Q86SU0 546 aaPredicted RBP8.51□□□□□ -1.05
AC006288.1-201ENST00000565320 PHLDB1Q86UU1 1377 aa8.5□□□□□ -1.05
AC006288.1-201ENST00000565320 FHOD3Q2V2M9 1422 aa8.5□□□□□ -1.05
AC006288.1-201ENST00000565320 IFNLR1Q8IU57 520 aaPredicted RBP8.5□□□□□ -1.05
AC006288.1-201ENST00000565320 SAMD9Q5K651 1589 aa8.5□□□□□ -1.05
AC006288.1-201ENST00000565320 SETD5Q9C0A6 1442 aa8.49□□□□□ -1.05
AC006288.1-201ENST00000565320 CHADLQ6NUI6 762 aa8.49□□□□□ -1.05
AC006288.1-201ENST00000565320 THOC2Q8NI27 1593 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms