RNA–Protein interactions for RNA: ENST00000565320.1

AC006288.1-201, humanhuman

TSL 3 BASIC

Gene AC006288.1, Length 1,463 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006288.1-201ENST00000565320 AEBP2Q6ZN18 517 aaPredicted RBP16.29■□□□□ 0.2
AC006288.1-201ENST00000565320 CHIC1Q5VXU3 224 aa15.67■□□□□ 0.1
AC006288.1-201ENST00000565320 SENP3Q9H4L4 574 aaPredicted RBP13.99□□□□□ -0.17
AC006288.1-201ENST00000565320 PHF23Q9BUL5 403 aaPredicted RBP13.74□□□□□ -0.21
AC006288.1-201ENST00000565320 FOXD1Q16676 465 aa12.93□□□□□ -0.34
AC006288.1-201ENST00000565320 PLPPR3Q6T4P5 718 aa12.6□□□□□ -0.39
AC006288.1-201ENST00000565320 NISCHQ9Y2I1 1504 aa12.29□□□□□ -0.44
AC006288.1-201ENST00000565320 MSH5O43196 834 aa12.16□□□□□ -0.46
AC006288.1-201ENST00000565320 PPP6R1Q9UPN7 881 aa12.14□□□□□ -0.47
AC006288.1-201ENST00000565320 PIAS4Q8N2W9 510 aaPredicted RBP12.13□□□□□ -0.47
AC006288.1-201ENST00000565320 ADRA2BP18089 450 aa12.1□□□□□ -0.47
AC006288.1-201ENST00000565320 POTEDQ86YR6 584 aa11.55□□□□□ -0.56
AC006288.1-201ENST00000565320 SCAF1Q9H7N4 1312 aaKnown RBP11.21□□□□□ -0.61
AC006288.1-201ENST00000565320 DMRT2Q9Y5R5 561 aa11.11□□□□□ -0.63
AC006288.1-201ENST00000565320 MAPK8IP2Q13387 824 aaPredicted RBP11.04□□□□□ -0.64
AC006288.1-201ENST00000565320 PPP4R3CPQ6ZMV5 832 aa11□□□□□ -0.65
AC006288.1-201ENST00000565320 CNKSR2Q8WXI2 1034 aa10.82□□□□□ -0.68
AC006288.1-201ENST00000565320 HOXD11P31277 338 aaPredicted RBP10.76□□□□□ -0.69
AC006288.1-201ENST00000565320 KCNA4P22459 653 aa10.75□□□□□ -0.69
AC006288.1-201ENST00000565320 RNF216Q9NWF9 866 aaPredicted RBP10.72□□□□□ -0.69
AC006288.1-201ENST00000565320 NCBP3Q53F19 620 aaKnown RBP10.69□□□□□ -0.7
AC006288.1-201ENST00000565320 CCDC180Q9P1Z9 1646 aa10.55□□□□□ -0.72
AC006288.1-201ENST00000565320 DCAF8L1A6NGE4 600 aa10.49□□□□□ -0.73
AC006288.1-201ENST00000565320 DNAJC5BQ9UF47 199 aa10.49□□□□□ -0.73
AC006288.1-201ENST00000565320 NPM3O75607 178 aaKnown RBP10.48□□□□□ -0.73
AC006288.1-201ENST00000565320 EHMT2Q96KQ7 1210 aa10.46□□□□□ -0.74
AC006288.1-201ENST00000565320 ZCCHC6Q5VYS8 1495 aaKnown RBP10.4□□□□□ -0.74
AC006288.1-201ENST00000565320 RNF39Q9H2S5 420 aa10.35□□□□□ -0.75
AC006288.1-201ENST00000565320 SLC4A1APQ9BWU0 796 aaKnown RBP10.27□□□□□ -0.77
AC006288.1-201ENST00000565320 CACNB1Q02641 598 aaPredicted RBP10.25□□□□□ -0.77
AC006288.1-201ENST00000565320 C1QBPQ07021 282 aaKnown RBP10.24□□□□□ -0.77
AC006288.1-201ENST00000565320 SHROOM4Q9ULL8 1493 aa10.21□□□□□ -0.78
AC006288.1-201ENST00000565320 DCAF1Q9Y4B6 1507 aa10.2□□□□□ -0.78
AC006288.1-201ENST00000565320 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.17□□□□□ -0.78
AC006288.1-201ENST00000565320 CSRNP3Q8WYN3 585 aa10.16□□□□□ -0.78
AC006288.1-201ENST00000565320 SUPT5HO00267 1087 aaKnown RBP10□□□□□ -0.81
AC006288.1-201ENST00000565320 U3KPZ7 1027 aaPredicted RBP9.99□□□□□ -0.81
AC006288.1-201ENST00000565320 DCAF8L2P0C7V8 631 aa9.98□□□□□ -0.81
AC006288.1-201ENST00000565320 MYO15BQ96JP2 1530 aa9.97□□□□□ -0.81
AC006288.1-201ENST00000565320 SLC4A2P04920 1241 aa9.96□□□□□ -0.82
AC006288.1-201ENST00000565320 ZBTB22O15209 634 aa9.95□□□□□ -0.82
AC006288.1-201ENST00000565320 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.85□□□□□ -0.83
AC006288.1-201ENST00000565320 APLP2Q06481 763 aa9.85□□□□□ -0.83
AC006288.1-201ENST00000565320 HNRNPUL2Q1KMD3 747 aaKnown RBP9.85□□□□□ -0.83
AC006288.1-201ENST00000565320 ABCC9O60706 1549 aa9.79□□□□□ -0.84
AC006288.1-201ENST00000565320 SAMD1Q6SPF0 538 aaPredicted RBP9.78□□□□□ -0.84
AC006288.1-201ENST00000565320 NACADO15069 1562 aa9.76□□□□□ -0.85
AC006288.1-201ENST00000565320 MYCNP04198 464 aaPredicted RBP9.75□□□□□ -0.85
AC006288.1-201ENST00000565320 SPINK5Q9NQ38 1064 aaPredicted RBP9.75□□□□□ -0.85
AC006288.1-201ENST00000565320 CAPN15O75808 1086 aa9.74□□□□□ -0.85
AC006288.1-201ENST00000565320 FOXD4L1Q9NU39 408 aa9.74□□□□□ -0.85
AC006288.1-201ENST00000565320 SCRIBQ14160 1630 aa9.71□□□□□ -0.85
AC006288.1-201ENST00000565320 DSG3P32926 999 aa9.71□□□□□ -0.86
AC006288.1-201ENST00000565320 DNAJC5Q9H3Z4 198 aa9.71□□□□□ -0.86
AC006288.1-201ENST00000565320 ZNF219Q9P2Y4 722 aaPredicted RBP9.71□□□□□ -0.86
AC006288.1-201ENST00000565320 RSF1Q96T23 1441 aaPredicted RBP9.68□□□□□ -0.86
AC006288.1-201ENST00000565320 TRHP20396 242 aaPredicted RBP9.59□□□□□ -0.87
AC006288.1-201ENST00000565320 RB1CC1Q8TDY2 1594 aa9.59□□□□□ -0.87
AC006288.1-201ENST00000565320 CECR2Q9BXF3 1484 aa9.51□□□□□ -0.89
AC006288.1-201ENST00000565320 MROH2BQ7Z745 1585 aa9.5□□□□□ -0.89
AC006288.1-201ENST00000565320 ABCB7O75027 752 aa9.48□□□□□ -0.89
AC006288.1-201ENST00000565320 BAZ1AQ9NRL2 1556 aaPredicted RBP9.46□□□□□ -0.89
AC006288.1-201ENST00000565320 ATXN8OSP0DMR3 200 aa9.46□□□□□ -0.9
AC006288.1-201ENST00000565320 WIZO95785 1651 aa9.42□□□□□ -0.9
AC006288.1-201ENST00000565320 LOC105371045A0A1W2PR82 267 aa9.4□□□□□ -0.9
AC006288.1-201ENST00000565320 TRIM41Q8WV44 630 aa9.4□□□□□ -0.9
AC006288.1-201ENST00000565320 POLA2Q14181 598 aa9.4□□□□□ -0.91
AC006288.1-201ENST00000565320 HRCP23327 699 aa9.39□□□□□ -0.91
AC006288.1-201ENST00000565320 ATF5Q9Y2D1 282 aaPredicted RBP9.38□□□□□ -0.91
AC006288.1-201ENST00000565320 ZBTB12Q9Y330 459 aaPredicted RBP9.36□□□□□ -0.91
AC006288.1-201ENST00000565320 UNC13AQ9UPW8 1703 aa9.36□□□□□ -0.91
AC006288.1-201ENST00000565320 SMARCA4P51532 1647 aa9.36□□□□□ -0.91
AC006288.1-201ENST00000565320 TOP2AP11388 1531 aaKnown RBP9.35□□□□□ -0.91
AC006288.1-201ENST00000565320 EIF4G1Q04637 1599 aaKnown RBP9.35□□□□□ -0.91
AC006288.1-201ENST00000565320 RBM42Q9BTD8 480 aaKnown RBP9.34□□□□□ -0.91
AC006288.1-201ENST00000565320 PCGF6Q9BYE7 350 aa9.33□□□□□ -0.92
AC006288.1-201ENST00000565320 BICRAQ9NZM4 1560 aa9.29□□□□□ -0.92
AC006288.1-201ENST00000565320 TRIM26Q12899 539 aaPredicted RBP9.28□□□□□ -0.92
AC006288.1-201ENST00000565320 CCDC88BA6NC98 1476 aa9.27□□□□□ -0.93
AC006288.1-201ENST00000565320 SMARCA2P51531 1590 aa9.26□□□□□ -0.93
AC006288.1-201ENST00000565320 PEG3Q9GZU2 1588 aa9.26□□□□□ -0.93
AC006288.1-201ENST00000565320 FAM9AQ8IZU1 332 aaPredicted RBP9.21□□□□□ -0.94
AC006288.1-201ENST00000565320 EEA1Q15075 1411 aa9.17□□□□□ -0.94
AC006288.1-201ENST00000565320 PABPN1Q86U42 306 aaKnown RBP eCLIP9.16□□□□□ -0.94
AC006288.1-201ENST00000565320 ABCC8Q09428 1581 aa9.15□□□□□ -0.95
AC006288.1-201ENST00000565320 ATAD2BQ9ULI0 1458 aa9.14□□□□□ -0.95
AC006288.1-201ENST00000565320 FKBP8Q14318 412 aa9.14□□□□□ -0.95
AC006288.1-201ENST00000565320 ZEB1P37275 1124 aaPredicted RBP9.13□□□□□ -0.95
AC006288.1-201ENST00000565320 AKT1S1Q96B36 256 aa9.12□□□□□ -0.95
AC006288.1-201ENST00000565320 FBLN2P98095 1184 aa9.11□□□□□ -0.95
AC006288.1-201ENST00000565320 OSCARQ8IYS5 282 aa9.1□□□□□ -0.95
AC006288.1-201ENST00000565320 WRNQ14191 1432 aaPredicted RBP eCLIP9.1□□□□□ -0.95
AC006288.1-201ENST00000565320 POTEHQ6S545 545 aa9.09□□□□□ -0.95
AC006288.1-201ENST00000565320 BAZ1BQ9UIG0 1483 aaKnown RBP9.09□□□□□ -0.95
AC006288.1-201ENST00000565320 TNIKQ9UKE5 1360 aa9.09□□□□□ -0.95
AC006288.1-201ENST00000565320 SOGA1O94964 1423 aa9.07□□□□□ -0.96
AC006288.1-201ENST00000565320 PPARGC1BQ86YN6 1023 aaKnown RBP9.05□□□□□ -0.96
AC006288.1-201ENST00000565320 CEP162Q5TB80 1403 aa9.03□□□□□ -0.96
AC006288.1-201ENST00000565320 SPDYE2BA6NHP3 402 aa9.03□□□□□ -0.96
AC006288.1-201ENST00000565320 SPDYE6P0CI01 402 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms