RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 RUSC2Q8N2Y8 1516 aa18.32■□□□□ 0.52
SF3B3-205ENST00000564899 FAM69CQ0P6D2 419 aa18.31■□□□□ 0.52
SF3B3-205ENST00000564899 ABCC10Q5T3U5 1492 aa18.31■□□□□ 0.52
SF3B3-205ENST00000564899 DIP2BQ9P265 1576 aa18.3■□□□□ 0.52
SF3B3-205ENST00000564899 JPH4Q96JJ6 628 aa18.3■□□□□ 0.52
SF3B3-205ENST00000564899 ADCY10Q96PN6 1610 aa18.3■□□□□ 0.52
SF3B3-205ENST00000564899 FAM9AQ8IZU1 332 aaPredicted RBP18.29■□□□□ 0.52
SF3B3-205ENST00000564899 EEA1Q15075 1411 aa18.29■□□□□ 0.52
SF3B3-205ENST00000564899 KIF27Q86VH2 1401 aa18.27■□□□□ 0.52
SF3B3-205ENST00000564899 KDM4FA0A1W2PPD8 638 aa18.27■□□□□ 0.52
SF3B3-205ENST00000564899 MAPKBP1O60336 1514 aa18.26■□□□□ 0.51
SF3B3-205ENST00000564899 KDM6BO15054 1643 aa18.21■□□□□ 0.51
SF3B3-205ENST00000564899 TSPOAP1O95153 1857 aa18.21■□□□□ 0.51
SF3B3-205ENST00000564899 CSRNP3Q8WYN3 585 aa18.18■□□□□ 0.5
SF3B3-205ENST00000564899 NPM1P06748 294 aaKnown RBP eCLIP18.13■□□□□ 0.49
SF3B3-205ENST00000564899 ILDR1Q86SU0 546 aaPredicted RBP18.11■□□□□ 0.49
SF3B3-205ENST00000564899 IGF1RP08069 1367 aa18.11■□□□□ 0.49
SF3B3-205ENST00000564899 KIAA0586Q9BVV6 1533 aa18.1■□□□□ 0.49
SF3B3-205ENST00000564899 PPRC1Q5VV67 1664 aaKnown RBP18.08■□□□□ 0.48
SF3B3-205ENST00000564899 TTBK1Q5TCY1 1321 aaPredicted RBP18.06■□□□□ 0.48
SF3B3-205ENST00000564899 PRXQ9BXM0 1461 aa18.05■□□□□ 0.48
SF3B3-205ENST00000564899 KIF21BO75037 1637 aa18.04■□□□□ 0.48
SF3B3-205ENST00000564899 LOC105371045A0A1W2PR82 267 aa18.03■□□□□ 0.48
SF3B3-205ENST00000564899 EHMT2Q96KQ7 1210 aa18.03■□□□□ 0.48
SF3B3-205ENST00000564899 CARMIL1Q5VZK9 1371 aa18.03■□□□□ 0.48
SF3B3-205ENST00000564899 GOLGA3Q08378 1498 aa18.01■□□□□ 0.47
SF3B3-205ENST00000564899 COL17A1Q9UMD9 1497 aaPredicted RBP18.01■□□□□ 0.47
SF3B3-205ENST00000564899 PTPRGP23470 1445 aa18.01■□□□□ 0.47
SF3B3-205ENST00000564899 CUL7Q14999 1698 aa18.01■□□□□ 0.47
SF3B3-205ENST00000564899 ADGRL1O94910 1474 aa18.01■□□□□ 0.47
SF3B3-205ENST00000564899 RAPGEF2Q9Y4G8 1499 aa18■□□□□ 0.47
SF3B3-205ENST00000564899 ASXL2Q76L83 1435 aa17.99■□□□□ 0.47
SF3B3-205ENST00000564899 ABCC2Q92887 1545 aa17.99■□□□□ 0.47
SF3B3-205ENST00000564899 GLI2P10070 1586 aa17.95■□□□□ 0.46
SF3B3-205ENST00000564899 TNIKQ9UKE5 1360 aa17.93■□□□□ 0.46
SF3B3-205ENST00000564899 UBTFP17480 764 aaKnown RBP17.92■□□□□ 0.46
SF3B3-205ENST00000564899 HECW2Q9P2P5 1572 aa17.91■□□□□ 0.46
SF3B3-205ENST00000564899 PLB1Q6P1J6 1458 aa17.9■□□□□ 0.46
SF3B3-205ENST00000564899 DISP1Q96F81 1524 aa17.9■□□□□ 0.46
SF3B3-205ENST00000564899 IQGAP2Q13576 1575 aa17.89■□□□□ 0.45
SF3B3-205ENST00000564899 MAP3K4Q9Y6R4 1608 aa17.89■□□□□ 0.45
SF3B3-205ENST00000564899 UHRF1BP1LA0JNW5 1464 aa17.88■□□□□ 0.45
SF3B3-205ENST00000564899 EPRSP07814 1512 aaKnown RBP17.88■□□□□ 0.45
SF3B3-205ENST00000564899 CARMIL2Q6F5E8 1435 aa17.87■□□□□ 0.45
SF3B3-205ENST00000564899 UACAQ9BZF9 1416 aa17.87■□□□□ 0.45
SF3B3-205ENST00000564899 ZCCHC11Q5TAX3 1644 aaKnown RBP17.84■□□□□ 0.45
SF3B3-205ENST00000564899 KDM5BQ9UGL1 1544 aa17.84■□□□□ 0.45
SF3B3-205ENST00000564899 KIAA0556O60303 1618 aa17.77■□□□□ 0.44
SF3B3-205ENST00000564899 CEP162Q5TB80 1403 aa17.77■□□□□ 0.44
SF3B3-205ENST00000564899 UGGT2Q9NYU1 1516 aa17.77■□□□□ 0.43
SF3B3-205ENST00000564899 TEX14Q8IWB6 1497 aa17.75■□□□□ 0.43
SF3B3-205ENST00000564899 WDR7Q9Y4E6 1490 aa17.73■□□□□ 0.43
SF3B3-205ENST00000564899 CTTNBP2Q8WZ74 1663 aa17.73■□□□□ 0.43
SF3B3-205ENST00000564899 RANGAP1P46060 587 aaPredicted RBP17.71■□□□□ 0.43
SF3B3-205ENST00000564899 CLIP1P30622 1438 aa17.71■□□□□ 0.43
SF3B3-205ENST00000564899 MAGI3Q5TCQ9 1506 aa17.65■□□□□ 0.42
SF3B3-205ENST00000564899 CD109Q6YHK3 1445 aa17.64■□□□□ 0.42
SF3B3-205ENST00000564899 ABCA8O94911 1581 aa17.63■□□□□ 0.41
SF3B3-205ENST00000564899 KCNH8Q96L42 1107 aa17.63■□□□□ 0.41
SF3B3-205ENST00000564899 CFAP43Q8NDM7 1665 aa17.63■□□□□ 0.41
SF3B3-205ENST00000564899 ARHGAP35Q9NRY4 1499 aa17.61■□□□□ 0.41
SF3B3-205ENST00000564899 EFCAB5A4FU69 1503 aa17.61■□□□□ 0.41
SF3B3-205ENST00000564899 ARID3CA6NKF2 412 aa17.57■□□□□ 0.4
SF3B3-205ENST00000564899 SAMD9Q5K651 1589 aa17.57■□□□□ 0.4
SF3B3-205ENST00000564899 P3H3Q8IVL6 736 aa17.54■□□□□ 0.4
SF3B3-205ENST00000564899 FHOD3Q2V2M9 1422 aa17.53■□□□□ 0.4
SF3B3-205ENST00000564899 ARAP3Q8WWN8 1544 aa17.52■□□□□ 0.4
SF3B3-205ENST00000564899 ADAMTSL3P82987 1691 aa17.52■□□□□ 0.4
SF3B3-205ENST00000564899 PTPRMP28827 1452 aa17.52■□□□□ 0.4
SF3B3-205ENST00000564899 FBXO41Q8TF61 875 aa17.52■□□□□ 0.4
SF3B3-205ENST00000564899 VPS8Q8N3P4 1428 aa17.5■□□□□ 0.39
SF3B3-205ENST00000564899 ATP10BO94823 1461 aa17.49■□□□□ 0.39
SF3B3-205ENST00000564899 RAPGEF3O95398 923 aa17.48■□□□□ 0.39
SF3B3-205ENST00000564899 FRMPD1Q5SYB0 1578 aa17.48■□□□□ 0.39
SF3B3-205ENST00000564899 ABCA9Q8IUA7 1624 aa17.46■□□□□ 0.39
SF3B3-205ENST00000564899 MADDQ8WXG6 1647 aa17.46■□□□□ 0.39
SF3B3-205ENST00000564899 FMN1Q68DA7 1419 aa17.44■□□□□ 0.38
SF3B3-205ENST00000564899 BCORL1Q5H9F3 1711 aa17.44■□□□□ 0.38
SF3B3-205ENST00000564899 LMTK3Q96Q04 1460 aa17.44■□□□□ 0.38
SF3B3-205ENST00000564899 PCF11O94913 1555 aaKnown RBP17.42■□□□□ 0.38
SF3B3-205ENST00000564899 SIGLEC1Q9BZZ2 1709 aa17.38■□□□□ 0.37
SF3B3-205ENST00000564899 RIMS1Q86UR5 1692 aaKnown RBP17.37■□□□□ 0.37
SF3B3-205ENST00000564899 CASKIN1Q8WXD9 1431 aa17.37■□□□□ 0.37
SF3B3-205ENST00000564899 FYCO1Q9BQS8 1478 aa17.36■□□□□ 0.37
SF3B3-205ENST00000564899 HSPA2P54652 639 aa17.35■□□□□ 0.37
SF3B3-205ENST00000564899 NEO1Q92859 1461 aa17.35■□□□□ 0.37
SF3B3-205ENST00000564899 ARID4BQ4LE39 1312 aaPredicted RBP17.34■□□□□ 0.37
SF3B3-205ENST00000564899 ARHGEF40Q8TER5 1519 aa17.34■□□□□ 0.37
SF3B3-205ENST00000564899 RAPGEF6Q8TEU7 1601 aa17.34■□□□□ 0.37
SF3B3-205ENST00000564899 NUP153P49790 1475 aaKnown RBP17.32■□□□□ 0.36
SF3B3-205ENST00000564899 APLP2Q06481 763 aa17.32■□□□□ 0.36
SF3B3-205ENST00000564899 ATP1B4Q9UN42 357 aaPredicted RBP17.32■□□□□ 0.36
SF3B3-205ENST00000564899 PHLDB1Q86UU1 1377 aa17.31■□□□□ 0.36
SF3B3-205ENST00000564899 RICTORQ6R327 1708 aa17.31■□□□□ 0.36
SF3B3-205ENST00000564899 PLPPR3Q6T4P5 718 aa17.3■□□□□ 0.36
SF3B3-205ENST00000564899 HECW1Q76N89 1606 aa17.29■□□□□ 0.36
SF3B3-205ENST00000564899 YEATS2Q9ULM3 1422 aa17.27■□□□□ 0.35
SF3B3-205ENST00000564899 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.26■□□□□ 0.35
SF3B3-205ENST00000564899 HNRNPUL2Q1KMD3 747 aaKnown RBP17.26■□□□□ 0.35
SF3B3-205ENST00000564899 TTC37Q6PGP7 1564 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms