RNA–Protein interactions for RNA: ENST00000563965.5

STRA6-209, Transcript of stimulated by retinoic acid 6, humanhuman

TSL 1 (best) BASIC

Gene STRA6, Length 2,565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRA6-209ENST00000563965 GRIN2BQ13224 1484 aa28.36■■■□□ 2.13
STRA6-209ENST00000563965 EIF4G3O43432 1585 aaKnown RBP28.36■■■□□ 2.13
STRA6-209ENST00000563965 ADAMTS12P58397 1594 aa28.32■■■□□ 2.12
STRA6-209ENST00000563965 FHAD1B1AJZ9 1412 aa28.29■■■□□ 2.12
STRA6-209ENST00000563965 SNAPC4Q5SXM2 1469 aa28.23■■■□□ 2.11
STRA6-209ENST00000563965 P3H3Q8IVL6 736 aa28.22■■■□□ 2.11
STRA6-209ENST00000563965 APLP2Q06481 763 aa28.21■■■□□ 2.11
STRA6-209ENST00000563965 FHOD3Q2V2M9 1422 aa28.13■■■□□ 2.09
STRA6-209ENST00000563965 EFCAB5A4FU69 1503 aa28.13■■■□□ 2.09
STRA6-209ENST00000563965 MAGI1Q96QZ7 1491 aaPredicted RBP28.08■■■□□ 2.09
STRA6-209ENST00000563965 GRIN2AQ12879 1464 aa28.06■■■□□ 2.08
STRA6-209ENST00000563965 SAMD9Q5K651 1589 aa28.05■■■□□ 2.08
STRA6-209ENST00000563965 IQGAP2Q13576 1575 aa28.05■■■□□ 2.08
STRA6-209ENST00000563965 PCF11O94913 1555 aaKnown RBP28.01■■■□□ 2.08
STRA6-209ENST00000563965 FBLN2P98095 1184 aa28.01■■■□□ 2.07
STRA6-209ENST00000563965 KANK4Q5T7N3 995 aaPredicted RBP28.01■■■□□ 2.07
STRA6-209ENST00000563965 SYNJ2O15056 1496 aa28■■■□□ 2.07
STRA6-209ENST00000563965 CHMP7Q8WUX9 453 aaPredicted RBP28■■■□□ 2.07
STRA6-209ENST00000563965 ATP1B4Q9UN42 357 aaPredicted RBP27.95■■■□□ 2.06
STRA6-209ENST00000563965 TIAM1Q13009 1591 aa27.91■■■□□ 2.06
STRA6-209ENST00000563965 CEP170Q5SW79 1584 aa27.91■■■□□ 2.06
STRA6-209ENST00000563965 KIAA0586Q9BVV6 1533 aa27.91■■■□□ 2.06
STRA6-209ENST00000563965 FMN1Q68DA7 1419 aa27.9■■■□□ 2.06
STRA6-209ENST00000563965 ZEB1P37275 1124 aaPredicted RBP27.88■■■□□ 2.05
STRA6-209ENST00000563965 FYCO1Q9BQS8 1478 aa27.88■■■□□ 2.05
STRA6-209ENST00000563965 CASKIN1Q8WXD9 1431 aa27.87■■■□□ 2.05
STRA6-209ENST00000563965 UGGT2Q9NYU1 1516 aa27.86■■■□□ 2.05
STRA6-209ENST00000563965 CFAP43Q8NDM7 1665 aa27.85■■■□□ 2.05
STRA6-209ENST00000563965 MAP3K1Q13233 1512 aa27.84■■■□□ 2.05
STRA6-209ENST00000563965 NUP160Q12769 1436 aa27.8■■■□□ 2.04
STRA6-209ENST00000563965 LRRIQ1Q96JM4 1722 aa27.78■■■□□ 2.04
STRA6-209ENST00000563965 LRRC9Q6ZRR7 1453 aa27.77■■■□□ 2.04
STRA6-209ENST00000563965 DISP1Q96F81 1524 aa27.77■■■□□ 2.04
STRA6-209ENST00000563965 CHD1O14646 1710 aa27.77■■■□□ 2.04
STRA6-209ENST00000563965 KIAA0556O60303 1618 aa27.76■■■□□ 2.03
STRA6-209ENST00000563965 HNRNPUL2Q1KMD3 747 aaKnown RBP27.69■■■□□ 2.02
STRA6-209ENST00000563965 JPH4Q96JJ6 628 aa27.66■■■□□ 2.02
STRA6-209ENST00000563965 HECW1Q76N89 1606 aa27.63■■■□□ 2.01
STRA6-209ENST00000563965 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.61■■■□□ 2.01
STRA6-209ENST00000563965 RRBP1Q9P2E9 1410 aaKnown RBP27.61■■■□□ 2.01
STRA6-209ENST00000563965 PHLDB1Q86UU1 1377 aa27.58■■■□□ 2.01
STRA6-209ENST00000563965 ARID3CA6NKF2 412 aa27.57■■■□□ 2
STRA6-209ENST00000563965 MTUS2Q5JR59 1369 aa27.56■■■□□ 2
STRA6-209ENST00000563965 CARMIL2Q6F5E8 1435 aa27.56■■■□□ 2
STRA6-209ENST00000563965 CCNB3Q8WWL7 1395 aa27.55■■■□□ 2
STRA6-209ENST00000563965 CCDC18Q5T9S5 1454 aa27.54■■■□□ 2
STRA6-209ENST00000563965 EPRSP07814 1512 aaKnown RBP27.54■■■□□ 2
STRA6-209ENST00000563965 CDK13Q14004 1512 aaKnown RBP27.54■■■□□ 2
STRA6-209ENST00000563965 RAPGEF6Q8TEU7 1601 aa27.52■■■□□ 2
STRA6-209ENST00000563965 MAGI3Q5TCQ9 1506 aa27.5■■□□□ 1.99
STRA6-209ENST00000563965 CCER1Q8TC90 406 aaPredicted RBP27.48■■□□□ 1.99
STRA6-209ENST00000563965 PRG4Q92954 1404 aaPredicted RBP27.47■■□□□ 1.99
STRA6-209ENST00000563965 EHBP1L1Q8N3D4 1523 aa27.46■■□□□ 1.99
STRA6-209ENST00000563965 NUP153P49790 1475 aaKnown RBP27.46■■□□□ 1.99
STRA6-209ENST00000563965 PLB1Q6P1J6 1458 aa27.46■■□□□ 1.99
STRA6-209ENST00000563965 SUPT6HQ7KZ85 1726 aaKnown RBP27.44■■□□□ 1.98
STRA6-209ENST00000563965 ITGAEP38570 1179 aa27.44■■□□□ 1.98
STRA6-209ENST00000563965 NCOA2Q15596 1464 aa27.41■■□□□ 1.98
STRA6-209ENST00000563965 SHROOM2Q13796 1616 aa27.41■■□□□ 1.98
STRA6-209ENST00000563965 FAM50AQ14320 339 aaKnown RBP27.39■■□□□ 1.98
STRA6-209ENST00000563965 CLASP1Q7Z460 1538 aa27.34■■□□□ 1.97
STRA6-209ENST00000563965 ERCC6L2Q5T890 1561 aa27.34■■□□□ 1.97
STRA6-209ENST00000563965 FGD6Q6ZV73 1430 aa27.33■■□□□ 1.96
STRA6-209ENST00000563965 ABCA8O94911 1581 aa27.32■■□□□ 1.96
STRA6-209ENST00000563965 ARHGEF11O15085 1522 aa27.31■■□□□ 1.96
STRA6-209ENST00000563965 PTPRGP23470 1445 aa27.3■■□□□ 1.96
STRA6-209ENST00000563965 MYOM3Q5VTT5 1437 aa27.29■■□□□ 1.96
STRA6-209ENST00000563965 CDK11AQ9UQ88 783 aaPredicted RBP27.23■■□□□ 1.95
STRA6-209ENST00000563965 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.2■■□□□ 1.94
STRA6-209ENST00000563965 PTPN23Q9H3S7 1636 aa27.19■■□□□ 1.94
STRA6-209ENST00000563965 PELP1Q8IZL8 1130 aaKnown RBP27.19■■□□□ 1.94
STRA6-209ENST00000563965 ATP10BO94823 1461 aa27.18■■□□□ 1.94
STRA6-209ENST00000563965 SCAF1Q9H7N4 1312 aaKnown RBP27.17■■□□□ 1.94
STRA6-209ENST00000563965 TROQ12816 1431 aaPredicted RBP27.17■■□□□ 1.94
STRA6-209ENST00000563965 KIF14Q15058 1648 aa27.14■■□□□ 1.93
STRA6-209ENST00000563965 UACAQ9BZF9 1416 aa27.13■■□□□ 1.93
STRA6-209ENST00000563965 RAB3GAP2Q9H2M9 1393 aa27.09■■□□□ 1.93
STRA6-209ENST00000563965 ADCY10Q96PN6 1610 aa27.09■■□□□ 1.93
STRA6-209ENST00000563965 PTPRKQ15262 1439 aa27.08■■□□□ 1.93
STRA6-209ENST00000563965 PLEKHD1A6NEE1 506 aa27.07■■□□□ 1.92
STRA6-209ENST00000563965 TCOF1Q13428 1488 aaKnown RBP27.07■■□□□ 1.92
STRA6-209ENST00000563965 SETD5Q9C0A6 1442 aa27.07■■□□□ 1.92
STRA6-209ENST00000563965 MIA2Q96PC5 1412 aa27.06■■□□□ 1.92
STRA6-209ENST00000563965 DHX57Q6P158 1386 aaKnown RBP27.05■■□□□ 1.92
STRA6-209ENST00000563965 ABCC2Q92887 1545 aa27.04■■□□□ 1.92
STRA6-209ENST00000563965 OSCARQ8IYS5 282 aa27.02■■□□□ 1.92
STRA6-209ENST00000563965 ITSN2Q9NZM3 1697 aa26.99■■□□□ 1.91
STRA6-209ENST00000563965 ZNF644Q9H582 1327 aaPredicted RBP26.98■■□□□ 1.91
STRA6-209ENST00000563965 GPATCH8Q9UKJ3 1502 aaKnown RBP26.97■■□□□ 1.91
STRA6-209ENST00000563965 CDC42BPAQ5VT25 1732 aa26.95■■□□□ 1.9
STRA6-209ENST00000563965 CHIC2Q9UKJ5 165 aa26.94■■□□□ 1.9
STRA6-209ENST00000563965 CFDP1Q9UEE9 299 aaPredicted RBP26.94■■□□□ 1.9
STRA6-209ENST00000563965 ABCC10Q5T3U5 1492 aa26.93■■□□□ 1.9
STRA6-209ENST00000563965 ZCCHC11Q5TAX3 1644 aaKnown RBP26.92■■□□□ 1.9
STRA6-209ENST00000563965 ZNF777Q9ULD5 760 aaPredicted RBP26.9■■□□□ 1.9
STRA6-209ENST00000563965 HFM1A2PYH4 1435 aa26.9■■□□□ 1.9
STRA6-209ENST00000563965 UHRF1BP1LA0JNW5 1464 aa26.9■■□□□ 1.9
STRA6-209ENST00000563965 CAMSAP2Q08AD1 1489 aa26.89■■□□□ 1.9
STRA6-209ENST00000563965 NAIPQ13075 1403 aa26.87■■□□□ 1.89
STRA6-209ENST00000563965 DNMT1P26358 1616 aaKnown RBP26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms