RNA–Protein interactions for RNA: ENST00000563965.5

STRA6-209, Transcript of stimulated by retinoic acid 6, humanhuman

TSL 1 (best) BASIC

Gene STRA6, Length 2,565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRA6-209ENST00000563965 NISCHQ9Y2I1 1504 aa40.88■■■■■ 4.13
STRA6-209ENST00000563965 CCDC180Q9P1Z9 1646 aa35.52■■■■□ 3.28
STRA6-209ENST00000563965 ZCCHC6Q5VYS8 1495 aaKnown RBP34.36■■■■□ 3.09
STRA6-209ENST00000563965 DCAF8L2P0C7V8 631 aa33.95■■■■□ 3.02
STRA6-209ENST00000563965 SHROOM4Q9ULL8 1493 aa33.69■■■□□ 2.98
STRA6-209ENST00000563965 DCAF1Q9Y4B6 1507 aa33.67■■■□□ 2.98
STRA6-209ENST00000563965 ABCC9O60706 1549 aa33.66■■■□□ 2.98
STRA6-209ENST00000563965 MYO15BQ96JP2 1530 aa33.18■■■□□ 2.9
STRA6-209ENST00000563965 NACADO15069 1562 aa33.04■■■□□ 2.88
STRA6-209ENST00000563965 SCRIBQ14160 1630 aa32.87■■■□□ 2.85
STRA6-209ENST00000563965 RB1CC1Q8TDY2 1594 aa32.77■■■□□ 2.84
STRA6-209ENST00000563965 SUPT5HO00267 1087 aaKnown RBP32.45■■■□□ 2.79
STRA6-209ENST00000563965 UNC13AQ9UPW8 1703 aa32.26■■■□□ 2.76
STRA6-209ENST00000563965 CECR2Q9BXF3 1484 aa31.86■■■□□ 2.69
STRA6-209ENST00000563965 BICRAQ9NZM4 1560 aa31.85■■■□□ 2.69
STRA6-209ENST00000563965 PABPN1Q86U42 306 aaKnown RBP eCLIP31.82■■■□□ 2.68
STRA6-209ENST00000563965 RSF1Q96T23 1441 aaPredicted RBP31.8■■■□□ 2.68
STRA6-209ENST00000563965 MROH2BQ7Z745 1585 aa31.67■■■□□ 2.66
STRA6-209ENST00000563965 BAZ1AQ9NRL2 1556 aaPredicted RBP31.53■■■□□ 2.64
STRA6-209ENST00000563965 WIZO95785 1651 aa31.46■■■□□ 2.63
STRA6-209ENST00000563965 SMARCA4P51532 1647 aa31.43■■■□□ 2.62
STRA6-209ENST00000563965 CHIC1Q5VXU3 224 aa31.04■■■□□ 2.56
STRA6-209ENST00000563965 TOP2AP11388 1531 aaKnown RBP31.01■■■□□ 2.56
STRA6-209ENST00000563965 PEG3Q9GZU2 1588 aa30.94■■■□□ 2.54
STRA6-209ENST00000563965 EIF4G1Q04637 1599 aaKnown RBP30.87■■■□□ 2.53
STRA6-209ENST00000563965 ATAD2BQ9ULI0 1458 aa30.86■■■□□ 2.53
STRA6-209ENST00000563965 SMARCA2P51531 1590 aa30.8■■■□□ 2.52
STRA6-209ENST00000563965 CCDC88BA6NC98 1476 aa30.76■■■□□ 2.51
STRA6-209ENST00000563965 BAZ1BQ9UIG0 1483 aaKnown RBP30.71■■■□□ 2.51
STRA6-209ENST00000563965 NCAPD3P42695 1498 aa30.5■■■□□ 2.47
STRA6-209ENST00000563965 HMGXB3Q12766 1538 aa30.47■■■□□ 2.47
STRA6-209ENST00000563965 CC2D2AQ9P2K1 1620 aa30.41■■■□□ 2.46
STRA6-209ENST00000563965 TRIM41Q8WV44 630 aa30.4■■■□□ 2.46
STRA6-209ENST00000563965 ABCC8Q09428 1581 aa30.25■■■□□ 2.43
STRA6-209ENST00000563965 FAM9AQ8IZU1 332 aaPredicted RBP30■■■□□ 2.39
STRA6-209ENST00000563965 LOC105371045A0A1W2PR82 267 aa29.97■■■□□ 2.39
STRA6-209ENST00000563965 WRNQ14191 1432 aaPredicted RBP eCLIP29.92■■■□□ 2.38
STRA6-209ENST00000563965 CFTRP13569 1480 aa29.9■■■□□ 2.38
STRA6-209ENST00000563965 SYNJ1O43426 1573 aa29.85■■■□□ 2.37
STRA6-209ENST00000563965 PRDM2Q13029 1718 aa29.79■■■□□ 2.36
STRA6-209ENST00000563965 CADPSQ9ULU8 1353 aa29.77■■■□□ 2.36
STRA6-209ENST00000563965 DNAJC5BQ9UF47 199 aa29.75■■■□□ 2.35
STRA6-209ENST00000563965 EHMT2Q96KQ7 1210 aa29.69■■■□□ 2.34
STRA6-209ENST00000563965 SOGA1O94964 1423 aa29.68■■■□□ 2.34
STRA6-209ENST00000563965 TOP2BQ02880 1626 aa29.65■■■□□ 2.34
STRA6-209ENST00000563965 NESP48681 1621 aa29.62■■■□□ 2.33
STRA6-209ENST00000563965 BIVM-ERCC5R4GMW8 1640 aa29.61■■■□□ 2.33
STRA6-209ENST00000563965 RUSC2Q8N2Y8 1516 aa29.6■■■□□ 2.33
STRA6-209ENST00000563965 CUX1P39880 1505 aa29.58■■■□□ 2.33
STRA6-209ENST00000563965 FANCD2Q9BXW9 1451 aa29.49■■■□□ 2.31
STRA6-209ENST00000563965 LAMC3Q9Y6N6 1575 aa29.47■■■□□ 2.31
STRA6-209ENST00000563965 EEA1Q15075 1411 aa29.45■■■□□ 2.31
STRA6-209ENST00000563965 CSRNP3Q8WYN3 585 aa29.4■■■□□ 2.3
STRA6-209ENST00000563965 CEP164Q9UPV0 1460 aa29.28■■■□□ 2.28
STRA6-209ENST00000563965 KIF21AQ7Z4S6 1674 aa29.24■■■□□ 2.27
STRA6-209ENST00000563965 FGD5Q6ZNL6 1462 aa29.24■■■□□ 2.27
STRA6-209ENST00000563965 PDS5BQ9NTI5 1447 aa29.23■■■□□ 2.27
STRA6-209ENST00000563965 HRCP23327 699 aa29.22■■■□□ 2.27
STRA6-209ENST00000563965 DNMBPQ6XZF7 1577 aa29.22■■■□□ 2.27
STRA6-209ENST00000563965 TOPBP1Q92547 1522 aa29.19■■■□□ 2.26
STRA6-209ENST00000563965 GOLGA3Q08378 1498 aa29.15■■■□□ 2.26
STRA6-209ENST00000563965 KIF21BO75037 1637 aa29.14■■■□□ 2.26
STRA6-209ENST00000563965 URB2Q14146 1524 aaKnown RBP29.14■■■□□ 2.26
STRA6-209ENST00000563965 KIF27Q86VH2 1401 aa29.12■■■□□ 2.25
STRA6-209ENST00000563965 UBTFP17480 764 aaKnown RBP29.12■■■□□ 2.25
STRA6-209ENST00000563965 CUX2O14529 1486 aa29.08■■■□□ 2.25
STRA6-209ENST00000563965 POLA1P09884 1462 aaPredicted RBP29.07■■■□□ 2.24
STRA6-209ENST00000563965 TNIKQ9UKE5 1360 aa29.06■■■□□ 2.24
STRA6-209ENST00000563965 RAPGEF2Q9Y4G8 1499 aa29.05■■■□□ 2.24
STRA6-209ENST00000563965 RAD54L2Q9Y4B4 1467 aa29.04■■■□□ 2.24
STRA6-209ENST00000563965 CEP162Q5TB80 1403 aa29■■■□□ 2.23
STRA6-209ENST00000563965 PRXQ9BXM0 1461 aa28.96■■■□□ 2.23
STRA6-209ENST00000563965 PCGF6Q9BYE7 350 aa28.94■■■□□ 2.22
STRA6-209ENST00000563965 ABCA10Q8WWZ4 1543 aa28.91■■■□□ 2.22
STRA6-209ENST00000563965 ERICH3Q5RHP9 1530 aa28.9■■■□□ 2.22
STRA6-209ENST00000563965 MRC2Q9UBG0 1479 aa28.88■■■□□ 2.21
STRA6-209ENST00000563965 IGF1RP08069 1367 aa28.88■■■□□ 2.21
STRA6-209ENST00000563965 WDR97A6NE52 1622 aa28.85■■■□□ 2.21
STRA6-209ENST00000563965 ERCC6Q03468 1493 aa28.8■■■□□ 2.2
STRA6-209ENST00000563965 RANGAP1P46060 587 aaPredicted RBP28.77■■■□□ 2.2
STRA6-209ENST00000563965 CARMIL1Q5VZK9 1371 aa28.74■■■□□ 2.19
STRA6-209ENST00000563965 TDRD9Q8NDG6 1382 aaKnown RBP28.74■■■□□ 2.19
STRA6-209ENST00000563965 TARBP1Q13395 1621 aaKnown RBP28.74■■■□□ 2.19
STRA6-209ENST00000563965 CLIP1P30622 1438 aa28.73■■■□□ 2.19
STRA6-209ENST00000563965 WDR62O43379 1518 aa28.71■■■□□ 2.19
STRA6-209ENST00000563965 ABCA5Q8WWZ7 1642 aa28.7■■■□□ 2.19
STRA6-209ENST00000563965 PPARGC1BQ86YN6 1023 aaKnown RBP28.65■■■□□ 2.18
STRA6-209ENST00000563965 GAPVD1Q14C86 1478 aa28.65■■■□□ 2.18
STRA6-209ENST00000563965 THOC2Q8NI27 1593 aaKnown RBP28.64■■■□□ 2.18
STRA6-209ENST00000563965 CUL7Q14999 1698 aa28.61■■■□□ 2.17
STRA6-209ENST00000563965 TRIM26Q12899 539 aaPredicted RBP28.56■■■□□ 2.16
STRA6-209ENST00000563965 AQRO60306 1485 aaKnown RBP eCLIP28.54■■■□□ 2.16
STRA6-209ENST00000563965 IFT140Q96RY7 1462 aa28.52■■■□□ 2.16
STRA6-209ENST00000563965 PBRM1Q86U86 1689 aa28.52■■■□□ 2.16
STRA6-209ENST00000563965 ZNF608Q9ULD9 1512 aaPredicted RBP28.49■■■□□ 2.15
STRA6-209ENST00000563965 VPS8Q8N3P4 1428 aa28.46■■■□□ 2.15
STRA6-209ENST00000563965 ARAP1Q96P48 1450 aa28.44■■■□□ 2.14
STRA6-209ENST00000563965 TTBK1Q5TCY1 1321 aaPredicted RBP28.43■■■□□ 2.14
STRA6-209ENST00000563965 ARHGAP35Q9NRY4 1499 aa28.4■■■□□ 2.14
STRA6-209ENST00000563965 CTTNBP2Q8WZ74 1663 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms