RNA–Protein interactions for RNA: ENST00000563856.1

CBFA2T3-205, Transcript of CBFA2/RUNX1 translocation partner 3, humanhuman

TSL 2

Gene CBFA2T3, Length 2,380 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFA2T3-205ENST00000563856 IGF1RP08069 1367 aa27.15■■□□□ 1.94
CBFA2T3-205ENST00000563856 PRXQ9BXM0 1461 aa27.15■■□□□ 1.94
CBFA2T3-205ENST00000563856 TDRD9Q8NDG6 1382 aaKnown RBP27.15■■□□□ 1.94
CBFA2T3-205ENST00000563856 GAPVD1Q14C86 1478 aa27.14■■□□□ 1.93
CBFA2T3-205ENST00000563856 GOLGA3Q08378 1498 aa27.12■■□□□ 1.93
CBFA2T3-205ENST00000563856 ERICH3Q5RHP9 1530 aa27.1■■□□□ 1.93
CBFA2T3-205ENST00000563856 ZNF608Q9ULD9 1512 aaPredicted RBP27.08■■□□□ 1.93
CBFA2T3-205ENST00000563856 PBRM1Q86U86 1689 aa27.08■■□□□ 1.93
CBFA2T3-205ENST00000563856 CUL7Q14999 1698 aa27.07■■□□□ 1.92
CBFA2T3-205ENST00000563856 RAPGEF2Q9Y4G8 1499 aa27.06■■□□□ 1.92
CBFA2T3-205ENST00000563856 EIF4G3O43432 1585 aaKnown RBP27.05■■□□□ 1.92
CBFA2T3-205ENST00000563856 AQRO60306 1485 aaKnown RBP eCLIP27.04■■□□□ 1.922e-8■■■■□ 22.3
CBFA2T3-205ENST00000563856 HNRNPUL2Q1KMD3 747 aaKnown RBP27.01■■□□□ 1.92
CBFA2T3-205ENST00000563856 CARMIL1Q5VZK9 1371 aa27.01■■□□□ 1.91
CBFA2T3-205ENST00000563856 GRIN2BQ13224 1484 aa26.98■■□□□ 1.91
CBFA2T3-205ENST00000563856 UBTFP17480 764 aaKnown RBP26.94■■□□□ 1.9
CBFA2T3-205ENST00000563856 ADAMTS12P58397 1594 aa26.9■■□□□ 1.9
CBFA2T3-205ENST00000563856 FHAD1B1AJZ9 1412 aa26.85■■□□□ 1.89
CBFA2T3-205ENST00000563856 SNAPC4Q5SXM2 1469 aa26.83■■□□□ 1.89
CBFA2T3-205ENST00000563856 MAGI1Q96QZ7 1491 aaPredicted RBP26.82■■□□□ 1.88
CBFA2T3-205ENST00000563856 VPS8Q8N3P4 1428 aa26.74■■□□□ 1.87
CBFA2T3-205ENST00000563856 CTTNBP2Q8WZ74 1663 aa26.73■■□□□ 1.87
CBFA2T3-205ENST00000563856 DHX57Q6P158 1386 aaKnown RBP26.71■■□□□ 1.87
CBFA2T3-205ENST00000563856 SYNJ2O15056 1496 aa26.7■■□□□ 1.87
CBFA2T3-205ENST00000563856 CLIP1P30622 1438 aa26.69■■□□□ 1.86
CBFA2T3-205ENST00000563856 APLP2Q06481 763 aa26.68■■□□□ 1.86
CBFA2T3-205ENST00000563856 GRIN2AQ12879 1464 aa26.66■■□□□ 1.86
CBFA2T3-205ENST00000563856 RBM19Q9Y4C8 960 aaKnown RBP26.63■■□□□ 1.85
CBFA2T3-205ENST00000563856 FKBP8Q14318 412 aa26.59■■□□□ 1.85
CBFA2T3-205ENST00000563856 BCANQ96GW7 911 aa26.58■■□□□ 1.85
CBFA2T3-205ENST00000563856 CHMP7Q8WUX9 453 aaPredicted RBP26.56■■□□□ 1.84
CBFA2T3-205ENST00000563856 NEFLP07196 543 aa26.53■■□□□ 1.84
CBFA2T3-205ENST00000563856 CHD1O14646 1710 aa26.53■■□□□ 1.84
CBFA2T3-205ENST00000563856 CEP170Q5SW79 1584 aa26.51■■□□□ 1.84
CBFA2T3-205ENST00000563856 IQGAP2Q13576 1575 aa26.51■■□□□ 1.83
CBFA2T3-205ENST00000563856 ARHGAP35Q9NRY4 1499 aa26.5■■□□□ 1.83
CBFA2T3-205ENST00000563856 NUP160Q12769 1436 aa26.5■■□□□ 1.83
CBFA2T3-205ENST00000563856 RANGAP1P46060 587 aaPredicted RBP26.49■■□□□ 1.83
CBFA2T3-205ENST00000563856 KIAA0586Q9BVV6 1533 aa26.48■■□□□ 1.83
CBFA2T3-205ENST00000563856 EFCAB5A4FU69 1503 aa26.47■■□□□ 1.83
CBFA2T3-205ENST00000563856 FBLN2P98095 1184 aa26.47■■□□□ 1.83
CBFA2T3-205ENST00000563856 ARAP1Q96P48 1450 aa26.46■■□□□ 1.83
CBFA2T3-205ENST00000563856 SAMD9Q5K651 1589 aa26.43■■□□□ 1.82
CBFA2T3-205ENST00000563856 KCNH8Q96L42 1107 aa26.41■■□□□ 1.82
CBFA2T3-205ENST00000563856 UGGT2Q9NYU1 1516 aa26.39■■□□□ 1.82
CBFA2T3-205ENST00000563856 MYT1LQ9UL68 1186 aa26.36■■□□□ 1.81
CBFA2T3-205ENST00000563856 FANCIQ9NVI1 1328 aa26.35■■□□□ 1.81
CBFA2T3-205ENST00000563856 MSH5O43196 834 aa26.32■■□□□ 1.8
CBFA2T3-205ENST00000563856 RRBP1Q9P2E9 1410 aaKnown RBP26.3■■□□□ 1.8
CBFA2T3-205ENST00000563856 FHOD3Q2V2M9 1422 aa26.28■■□□□ 1.8
CBFA2T3-205ENST00000563856 ERICH6Q7L0X2 663 aa26.28■■□□□ 1.8
CBFA2T3-205ENST00000563856 KIAA0556O60303 1618 aa26.25■■□□□ 1.79
CBFA2T3-205ENST00000563856 DISP1Q96F81 1524 aa26.25■■□□□ 1.79
CBFA2T3-205ENST00000563856 PRKCSHP14314 528 aaPredicted RBP26.25■■□□□ 1.79
CBFA2T3-205ENST00000563856 CLASP1Q7Z460 1538 aa26.23■■□□□ 1.79
CBFA2T3-205ENST00000563856 P3H3Q8IVL6 736 aa26.23■■□□□ 1.79
CBFA2T3-205ENST00000563856 SHROOM2Q13796 1616 aa26.22■■□□□ 1.79
CBFA2T3-205ENST00000563856 CCER2I3L3R5 266 aa26.21■■□□□ 1.79
CBFA2T3-205ENST00000563856 ITGAEP38570 1179 aa26.19■■□□□ 1.78
CBFA2T3-205ENST00000563856 JPH4Q96JJ6 628 aa26.19■■□□□ 1.78
CBFA2T3-205ENST00000563856 FMN1Q68DA7 1419 aa26.18■■□□□ 1.78
CBFA2T3-205ENST00000563856 PCF11O94913 1555 aaKnown RBP26.16■■□□□ 1.78
CBFA2T3-205ENST00000563856 CARMIL2Q6F5E8 1435 aa26.13■■□□□ 1.77
CBFA2T3-205ENST00000563856 DDX10Q13206 875 aaKnown RBP26.13■■□□□ 1.77
CBFA2T3-205ENST00000563856 CDK11AQ9UQ88 783 aaPredicted RBP26.12■■□□□ 1.77
CBFA2T3-205ENST00000563856 FYCO1Q9BQS8 1478 aa26.11■■□□□ 1.77
CBFA2T3-205ENST00000563856 MAPKBP1O60336 1514 aa26.11■■□□□ 1.77
CBFA2T3-205ENST00000563856 CASKIN1Q8WXD9 1431 aa26.11■■□□□ 1.77
CBFA2T3-205ENST00000563856 CCNB3Q8WWL7 1395 aa26.1■■□□□ 1.77
CBFA2T3-205ENST00000563856 PPP1R15AO75807 674 aaPredicted RBP26.09■■□□□ 1.77
CBFA2T3-205ENST00000563856 PRG4Q92954 1404 aaPredicted RBP26.08■■□□□ 1.77
CBFA2T3-205ENST00000563856 KANK4Q5T7N3 995 aaPredicted RBP26.05■■□□□ 1.76
CBFA2T3-205ENST00000563856 ANP32CO43423 234 aa26.05■■□□□ 1.76
CBFA2T3-205ENST00000563856 TRIM52Q96A61 297 aa26.05■■□□□ 1.76
CBFA2T3-205ENST00000563856 MAP3K1Q13233 1512 aa26.04■■□□□ 1.76
CBFA2T3-205ENST00000563856 OSCARQ8IYS5 282 aa26.01■■□□□ 1.75
CBFA2T3-205ENST00000563856 CFAP43Q8NDM7 1665 aa26.01■■□□□ 1.75
CBFA2T3-205ENST00000563856 RAB3GAP2Q9H2M9 1393 aa26.01■■□□□ 1.75
CBFA2T3-205ENST00000563856 TIAM1Q13009 1591 aa26■■□□□ 1.75
CBFA2T3-205ENST00000563856 HECW1Q76N89 1606 aa25.98■■□□□ 1.75
CBFA2T3-205ENST00000563856 LRRIQ1Q96JM4 1722 aa25.98■■□□□ 1.75
CBFA2T3-205ENST00000563856 ERCC6L2Q5T890 1561 aa25.98■■□□□ 1.75
CBFA2T3-205ENST00000563856 DEKP35659 375 aaKnown RBP25.98■■□□□ 1.75
CBFA2T3-205ENST00000563856 TIMELESSQ9UNS1 1208 aa25.97■■□□□ 1.75
CBFA2T3-205ENST00000563856 RAPGEF6Q8TEU7 1601 aa25.96■■□□□ 1.75
CBFA2T3-205ENST00000563856 ERICH6BQ5W0A0 696 aa25.96■■□□□ 1.75
CBFA2T3-205ENST00000563856 ABCA8O94911 1581 aa25.9■■□□□ 1.74
CBFA2T3-205ENST00000563856 CCDC18Q5T9S5 1454 aa25.89■■□□□ 1.74
CBFA2T3-205ENST00000563856 ATP1B4Q9UN42 357 aaPredicted RBP25.89■■□□□ 1.73
CBFA2T3-205ENST00000563856 PTPRGP23470 1445 aa25.89■■□□□ 1.73
CBFA2T3-205ENST00000563856 SETD5Q9C0A6 1442 aa25.88■■□□□ 1.73
CBFA2T3-205ENST00000563856 PLB1Q6P1J6 1458 aa25.88■■□□□ 1.73
CBFA2T3-205ENST00000563856 EPRSP07814 1512 aaKnown RBP25.86■■□□□ 1.73
CBFA2T3-205ENST00000563856 NUP153P49790 1475 aaKnown RBP25.86■■□□□ 1.73
CBFA2T3-205ENST00000563856 LRRC9Q6ZRR7 1453 aa25.85■■□□□ 1.73
CBFA2T3-205ENST00000563856 CDK13Q14004 1512 aaKnown RBP25.79■■□□□ 1.72
CBFA2T3-205ENST00000563856 PPP4R2Q9NY27 417 aa25.78■■□□□ 1.72
CBFA2T3-205ENST00000563856 UACAQ9BZF9 1416 aa25.76■■□□□ 1.71
CBFA2T3-205ENST00000563856 SIN3AQ96ST3 1273 aa25.75■■□□□ 1.71
CBFA2T3-205ENST00000563856 EHBP1L1Q8N3D4 1523 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms