RNA–Protein interactions for RNA: ENST00000563856.1

CBFA2T3-205, Transcript of CBFA2/RUNX1 translocation partner 3, humanhuman

TSL 2

Gene CBFA2T3, Length 2,380 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFA2T3-205ENST00000563856 NISCHQ9Y2I1 1504 aa38.63■■■■□ 3.77
CBFA2T3-205ENST00000563856 CCDC180Q9P1Z9 1646 aa33.92■■■■□ 3.02
CBFA2T3-205ENST00000563856 ZCCHC6Q5VYS8 1495 aaKnown RBP32.41■■■□□ 2.78
CBFA2T3-205ENST00000563856 ABCC9O60706 1549 aa32.18■■■□□ 2.74
CBFA2T3-205ENST00000563856 DCAF1Q9Y4B6 1507 aa32.01■■■□□ 2.71
CBFA2T3-205ENST00000563856 DCAF8L2P0C7V8 631 aa31.78■■■□□ 2.68
CBFA2T3-205ENST00000563856 MYO15BQ96JP2 1530 aa31.76■■■□□ 2.68
CBFA2T3-205ENST00000563856 NACADO15069 1562 aa31.62■■■□□ 2.65
CBFA2T3-205ENST00000563856 HRCP23327 699 aa31.46■■■□□ 2.63
CBFA2T3-205ENST00000563856 RB1CC1Q8TDY2 1594 aa31.4■■■□□ 2.62
CBFA2T3-205ENST00000563856 SHROOM4Q9ULL8 1493 aa31.12■■■□□ 2.57
CBFA2T3-205ENST00000563856 SCRIBQ14160 1630 aa31.04■■■□□ 2.56
CBFA2T3-205ENST00000563856 UNC13AQ9UPW8 1703 aa30.8■■■□□ 2.52
CBFA2T3-205ENST00000563856 PELP1Q8IZL8 1130 aaKnown RBP30.79■■■□□ 2.52
CBFA2T3-205ENST00000563856 SUPT5HO00267 1087 aaKnown RBP30.6■■■□□ 2.49
CBFA2T3-205ENST00000563856 PCGF6Q9BYE7 350 aa30.58■■■□□ 2.49
CBFA2T3-205ENST00000563856 PPARGC1BQ86YN6 1023 aaKnown RBP30.49■■■□□ 2.47
CBFA2T3-205ENST00000563856 BICRAQ9NZM4 1560 aa30.46■■■□□ 2.47
CBFA2T3-205ENST00000563856 CHIC1Q5VXU3 224 aa30.33■■■□□ 2.45
CBFA2T3-205ENST00000563856 PABPN1Q86U42 306 aaKnown RBP eCLIP30.22■■■□□ 2.43
CBFA2T3-205ENST00000563856 CECR2Q9BXF3 1484 aa29.99■■■□□ 2.39
CBFA2T3-205ENST00000563856 BAZ1AQ9NRL2 1556 aaPredicted RBP29.86■■■□□ 2.37
CBFA2T3-205ENST00000563856 RSF1Q96T23 1441 aaPredicted RBP29.81■■■□□ 2.36
CBFA2T3-205ENST00000563856 TRIM26Q12899 539 aaPredicted RBP29.8■■■□□ 2.36
CBFA2T3-205ENST00000563856 MROH2BQ7Z745 1585 aa29.8■■■□□ 2.36
CBFA2T3-205ENST00000563856 SMARCA4P51532 1647 aa29.78■■■□□ 2.36
CBFA2T3-205ENST00000563856 ZEB1P37275 1124 aaPredicted RBP29.77■■■□□ 2.36
CBFA2T3-205ENST00000563856 MYT1Q01538 1121 aa29.74■■■□□ 2.35
CBFA2T3-205ENST00000563856 SCAF1Q9H7N4 1312 aaKnown RBP29.69■■■□□ 2.34
CBFA2T3-205ENST00000563856 WIZO95785 1651 aa29.55■■■□□ 2.32
CBFA2T3-205ENST00000563856 EIF4G1Q04637 1599 aaKnown RBP29.55■■■□□ 2.32
CBFA2T3-205ENST00000563856 PEG3Q9GZU2 1588 aa29.47■■■□□ 2.31
CBFA2T3-205ENST00000563856 LOC105371045A0A1W2PR82 267 aa29.42■■■□□ 2.3
CBFA2T3-205ENST00000563856 SMARCA2P51531 1590 aa29.34■■■□□ 2.29
CBFA2T3-205ENST00000563856 ATAD2BQ9ULI0 1458 aa29.33■■■□□ 2.29
CBFA2T3-205ENST00000563856 TOP2AP11388 1531 aaKnown RBP29.28■■■□□ 2.28
CBFA2T3-205ENST00000563856 CC2D2AQ9P2K1 1620 aa29.18■■■□□ 2.26
CBFA2T3-205ENST00000563856 NCAPD3P42695 1498 aa29.15■■■□□ 2.26
CBFA2T3-205ENST00000563856 BAZ1BQ9UIG0 1483 aaKnown RBP29.14■■■□□ 2.26
CBFA2T3-205ENST00000563856 HMGXB3Q12766 1538 aa29.12■■■□□ 2.25
CBFA2T3-205ENST00000563856 ACIN1Q9UKV3 1341 aaKnown RBP29.06■■■□□ 2.24
CBFA2T3-205ENST00000563856 CCDC88BA6NC98 1476 aa28.92■■■□□ 2.22
CBFA2T3-205ENST00000563856 NEUROD1Q13562 356 aa28.83■■■□□ 2.21
CBFA2T3-205ENST00000563856 CENPBP07199 599 aaPredicted RBP28.8■■■□□ 2.2
CBFA2T3-205ENST00000563856 GTF3C3Q9Y5Q9 886 aa28.72■■■□□ 2.19
CBFA2T3-205ENST00000563856 DNAJC5BQ9UF47 199 aa28.61■■■□□ 2.17
CBFA2T3-205ENST00000563856 DIEXFQ68CQ4 756 aaKnown RBP28.47■■■□□ 2.15
CBFA2T3-205ENST00000563856 TRIM41Q8WV44 630 aa28.46■■■□□ 2.15
CBFA2T3-205ENST00000563856 CFTRP13569 1480 aa28.41■■■□□ 2.14
CBFA2T3-205ENST00000563856 CCER1Q8TC90 406 aaPredicted RBP28.37■■■□□ 2.13
CBFA2T3-205ENST00000563856 PRDM2Q13029 1718 aa28.36■■■□□ 2.13
CBFA2T3-205ENST00000563856 CADPSQ9ULU8 1353 aa28.34■■■□□ 2.13
CBFA2T3-205ENST00000563856 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.28■■■□□ 2.12
CBFA2T3-205ENST00000563856 LAMC3Q9Y6N6 1575 aa28.24■■■□□ 2.11
CBFA2T3-205ENST00000563856 FAM9AQ8IZU1 332 aaPredicted RBP28.22■■■□□ 2.11
CBFA2T3-205ENST00000563856 ABCC8Q09428 1581 aa28.2■■■□□ 2.1
CBFA2T3-205ENST00000563856 NESP48681 1621 aa28.17■■■□□ 2.1
CBFA2T3-205ENST00000563856 WRNQ14191 1432 aaPredicted RBP eCLIP28.07■■■□□ 2.08
CBFA2T3-205ENST00000563856 FANCD2Q9BXW9 1451 aa28.03■■■□□ 2.08
CBFA2T3-205ENST00000563856 SYNJ1O43426 1573 aa28■■■□□ 2.07
CBFA2T3-205ENST00000563856 PDS5BQ9NTI5 1447 aa27.97■■■□□ 2.07
CBFA2T3-205ENST00000563856 ZNF316A6NFI3 1004 aaPredicted RBP27.96■■■□□ 2.07
CBFA2T3-205ENST00000563856 TTBK1Q5TCY1 1321 aaPredicted RBP27.95■■■□□ 2.07
CBFA2T3-205ENST00000563856 BIVM-ERCC5R4GMW8 1640 aa27.94■■■□□ 2.06
CBFA2T3-205ENST00000563856 TOP2BQ02880 1626 aa27.93■■■□□ 2.06
CBFA2T3-205ENST00000563856 EHMT2Q96KQ7 1210 aa27.91■■■□□ 2.06
CBFA2T3-205ENST00000563856 KIF21AQ7Z4S6 1674 aa27.91■■■□□ 2.06
CBFA2T3-205ENST00000563856 CUX1P39880 1505 aa27.9■■■□□ 2.06
CBFA2T3-205ENST00000563856 CEP164Q9UPV0 1460 aa27.9■■■□□ 2.06
CBFA2T3-205ENST00000563856 YTHDC1Q96MU7 727 aaKnown RBP27.82■■■□□ 2.04
CBFA2T3-205ENST00000563856 DNMBPQ6XZF7 1577 aa27.78■■■□□ 2.04
CBFA2T3-205ENST00000563856 CLSPNQ9HAW4 1339 aa27.73■■■□□ 2.03
CBFA2T3-205ENST00000563856 TOPBP1Q92547 1522 aa27.72■■■□□ 2.03
CBFA2T3-205ENST00000563856 URB2Q14146 1524 aaKnown RBP27.71■■■□□ 2.03
CBFA2T3-205ENST00000563856 MRC2Q9UBG0 1479 aa27.65■■■□□ 2.02
CBFA2T3-205ENST00000563856 MIER1Q8N108 512 aa27.64■■■□□ 2.02
CBFA2T3-205ENST00000563856 ERCC6Q03468 1493 aa27.63■■■□□ 2.01
CBFA2T3-205ENST00000563856 FGD5Q6ZNL6 1462 aa27.63■■■□□ 2.01
CBFA2T3-205ENST00000563856 SOGA1O94964 1423 aa27.58■■■□□ 2.01
CBFA2T3-205ENST00000563856 POLA1P09884 1462 aaPredicted RBP27.55■■■□□ 2
CBFA2T3-205ENST00000563856 WDR62O43379 1518 aa27.55■■■□□ 2
CBFA2T3-205ENST00000563856 THOC2Q8NI27 1593 aaKnown RBP27.55■■■□□ 2
CBFA2T3-205ENST00000563856 EEA1Q15075 1411 aa27.54■■■□□ 2
CBFA2T3-205ENST00000563856 RUSC2Q8N2Y8 1516 aa27.5■■□□□ 1.99
CBFA2T3-205ENST00000563856 ANP32EQ9BTT0 268 aa27.48■■□□□ 1.99
CBFA2T3-205ENST00000563856 CEP162Q5TB80 1403 aa27.44■■□□□ 1.98
CBFA2T3-205ENST00000563856 WDR97A6NE52 1622 aa27.41■■□□□ 1.98
CBFA2T3-205ENST00000563856 RAD54L2Q9Y4B4 1467 aa27.41■■□□□ 1.98
CBFA2T3-205ENST00000563856 ABCA10Q8WWZ4 1543 aa27.41■■□□□ 1.98
CBFA2T3-205ENST00000563856 BCL11AQ9H165 835 aa27.4■■□□□ 1.98
CBFA2T3-205ENST00000563856 KIF27Q86VH2 1401 aa27.38■■□□□ 1.97
CBFA2T3-205ENST00000563856 SUPT16HQ9Y5B9 1047 aaKnown RBP27.38■■□□□ 1.97
CBFA2T3-205ENST00000563856 CUX2O14529 1486 aa27.37■■□□□ 1.97
CBFA2T3-205ENST00000563856 TARBP1Q13395 1621 aaKnown RBP27.36■■□□□ 1.97
CBFA2T3-205ENST00000563856 CSRNP3Q8WYN3 585 aa27.33■■□□□ 1.97
CBFA2T3-205ENST00000563856 TNIKQ9UKE5 1360 aa27.32■■□□□ 1.96
CBFA2T3-205ENST00000563856 TSHZ2Q9NRE2 1034 aa27.27■■□□□ 1.96
CBFA2T3-205ENST00000563856 IFT140Q96RY7 1462 aa27.27■■□□□ 1.96
CBFA2T3-205ENST00000563856 ABCA5Q8WWZ7 1642 aa27.25■■□□□ 1.95
CBFA2T3-205ENST00000563856 KIF21BO75037 1637 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms