RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 SNAPC4Q5SXM2 1469 aa9.99□□□□□ -0.81
LINC01963-201ENST00000562038 SLC24A1O60721 1099 aa9.99□□□□□ -0.81
LINC01963-201ENST00000562038 ABCA10Q8WWZ4 1543 aa9.98□□□□□ -0.81
LINC01963-201ENST00000562038 POLA1P09884 1462 aaPredicted RBP9.96□□□□□ -0.82
LINC01963-201ENST00000562038 ADCY10Q96PN6 1610 aa9.94□□□□□ -0.82
LINC01963-201ENST00000562038 ADAMTS12P58397 1594 aa9.93□□□□□ -0.82
LINC01963-201ENST00000562038 ERICH3Q5RHP9 1530 aa9.93□□□□□ -0.82
LINC01963-201ENST00000562038 WRNQ14191 1432 aaPredicted RBP eCLIP9.93□□□□□ -0.82
LINC01963-201ENST00000562038 CUL7Q14999 1698 aa9.92□□□□□ -0.82
LINC01963-201ENST00000562038 FGD5Q6ZNL6 1462 aa9.91□□□□□ -0.82
LINC01963-201ENST00000562038 PCF11O94913 1555 aaKnown RBP9.89□□□□□ -0.83
LINC01963-201ENST00000562038 AQRO60306 1485 aaKnown RBP eCLIP9.88□□□□□ -0.83
LINC01963-201ENST00000562038 GRIN2AQ12879 1464 aa9.85□□□□□ -0.83
LINC01963-201ENST00000562038 EEA1Q15075 1411 aa9.83□□□□□ -0.84
LINC01963-201ENST00000562038 UHRF1BP1LA0JNW5 1464 aa9.83□□□□□ -0.84
LINC01963-201ENST00000562038 TEX14Q8IWB6 1497 aa9.83□□□□□ -0.84
LINC01963-201ENST00000562038 RUSC2Q8N2Y8 1516 aa9.83□□□□□ -0.84
LINC01963-201ENST00000562038 SOGA1O94964 1423 aa9.82□□□□□ -0.84
LINC01963-201ENST00000562038 CFAP43Q8NDM7 1665 aa9.81□□□□□ -0.84
LINC01963-201ENST00000562038 BCORL1Q5H9F3 1711 aa9.8□□□□□ -0.84
LINC01963-201ENST00000562038 SUPT5HO00267 1087 aaKnown RBP9.79□□□□□ -0.84
LINC01963-201ENST00000562038 ILDR2Q71H61 639 aa9.79□□□□□ -0.84
LINC01963-201ENST00000562038 PLB1Q6P1J6 1458 aa9.76□□□□□ -0.85
LINC01963-201ENST00000562038 TSPOAP1O95153 1857 aa9.76□□□□□ -0.85
LINC01963-201ENST00000562038 FHAD1B1AJZ9 1412 aa9.75□□□□□ -0.85
LINC01963-201ENST00000562038 KIF27Q86VH2 1401 aa9.75□□□□□ -0.85
LINC01963-201ENST00000562038 MAGI3Q5TCQ9 1506 aa9.74□□□□□ -0.85
LINC01963-201ENST00000562038 KIF21BO75037 1637 aa9.74□□□□□ -0.85
LINC01963-201ENST00000562038 RAD54L2Q9Y4B4 1467 aa9.73□□□□□ -0.85
LINC01963-201ENST00000562038 CTTNBP2Q8WZ74 1663 aa9.71□□□□□ -0.85
LINC01963-201ENST00000562038 ARAP3Q8WWN8 1544 aa9.71□□□□□ -0.86
LINC01963-201ENST00000562038 PREX1Q8TCU6 1659 aa9.71□□□□□ -0.86
LINC01963-201ENST00000562038 EPRSP07814 1512 aaKnown RBP9.7□□□□□ -0.86
LINC01963-201ENST00000562038 PTPRMP28827 1452 aa9.68□□□□□ -0.86
LINC01963-201ENST00000562038 TTC37Q6PGP7 1564 aa9.67□□□□□ -0.86
LINC01963-201ENST00000562038 ABCC2Q92887 1545 aa9.67□□□□□ -0.86
LINC01963-201ENST00000562038 PRXQ9BXM0 1461 aa9.67□□□□□ -0.86
LINC01963-201ENST00000562038 STRCQ7RTU9 1775 aa9.65□□□□□ -0.86
LINC01963-201ENST00000562038 DISP3Q9P2K9 1392 aa9.65□□□□□ -0.86
LINC01963-201ENST00000562038 COL17A1Q9UMD9 1497 aaPredicted RBP9.64□□□□□ -0.87
LINC01963-201ENST00000562038 LTBP4Q8N2S1 1624 aa9.64□□□□□ -0.87
LINC01963-201ENST00000562038 PHLDB1Q86UU1 1377 aa9.63□□□□□ -0.87
LINC01963-201ENST00000562038 UGGT2Q9NYU1 1516 aa9.63□□□□□ -0.87
LINC01963-201ENST00000562038 PTPRTO14522 1441 aa9.63□□□□□ -0.87
LINC01963-201ENST00000562038 KDM5BQ9UGL1 1544 aa9.62□□□□□ -0.87
LINC01963-201ENST00000562038 IGF1RP08069 1367 aa9.62□□□□□ -0.87
LINC01963-201ENST00000562038 RAPGEF2Q9Y4G8 1499 aa9.61□□□□□ -0.87
LINC01963-201ENST00000562038 MED1Q15648 1581 aaPredicted RBP9.6□□□□□ -0.87
LINC01963-201ENST00000562038 CERKQ8TCT0 537 aa9.6□□□□□ -0.87
LINC01963-201ENST00000562038 FER1L4A9Z1Z3 1794 aa9.6□□□□□ -0.87
LINC01963-201ENST00000562038 IQGAP2Q13576 1575 aa9.59□□□□□ -0.87
LINC01963-201ENST00000562038 SAMD9Q5K651 1589 aa9.59□□□□□ -0.87
LINC01963-201ENST00000562038 EFCAB5A4FU69 1503 aa9.59□□□□□ -0.87
LINC01963-201ENST00000562038 CHMP7Q8WUX9 453 aaPredicted RBP9.58□□□□□ -0.88
LINC01963-201ENST00000562038 MADDQ8WXG6 1647 aa9.58□□□□□ -0.88
LINC01963-201ENST00000562038 TDRD9Q8NDG6 1382 aaKnown RBP9.58□□□□□ -0.88
LINC01963-201ENST00000562038 FAM69CQ0P6D2 419 aa9.57□□□□□ -0.88
LINC01963-201ENST00000562038 PRG4Q92954 1404 aaPredicted RBP9.56□□□□□ -0.88
LINC01963-201ENST00000562038 ARHGEF40Q8TER5 1519 aa9.56□□□□□ -0.88
LINC01963-201ENST00000562038 ZCCHC11Q5TAX3 1644 aaKnown RBP9.55□□□□□ -0.88
LINC01963-201ENST00000562038 ZMYM4Q5VZL5 1548 aa9.54□□□□□ -0.88
LINC01963-201ENST00000562038 GOLGA3Q08378 1498 aa9.54□□□□□ -0.88
LINC01963-201ENST00000562038 CARMIL1Q5VZK9 1371 aa9.54□□□□□ -0.88
LINC01963-201ENST00000562038 CHIC1Q5VXU3 224 aa9.53□□□□□ -0.88
LINC01963-201ENST00000562038 FRMPD1Q5SYB0 1578 aa9.53□□□□□ -0.88
LINC01963-201ENST00000562038 KIAA0556O60303 1618 aa9.52□□□□□ -0.88
LINC01963-201ENST00000562038 RIMS1Q86UR5 1692 aaKnown RBP9.51□□□□□ -0.89
LINC01963-201ENST00000562038 ASXL2Q76L83 1435 aa9.5□□□□□ -0.89
LINC01963-201ENST00000562038 ABCA9Q8IUA7 1624 aa9.48□□□□□ -0.89
LINC01963-201ENST00000562038 CFAP74Q9C0B2 1584 aa9.47□□□□□ -0.89
LINC01963-201ENST00000562038 REREQ9P2R6 1566 aa9.47□□□□□ -0.89
LINC01963-201ENST00000562038 RICTORQ6R327 1708 aa9.46□□□□□ -0.89
LINC01963-201ENST00000562038 DISP1Q96F81 1524 aa9.46□□□□□ -0.9
LINC01963-201ENST00000562038 ZNF142P52746 1687 aaPredicted RBP9.46□□□□□ -0.9
LINC01963-201ENST00000562038 ABCA8O94911 1581 aa9.45□□□□□ -0.9
LINC01963-201ENST00000562038 ARHGEF12Q9NZN5 1544 aa9.45□□□□□ -0.9
LINC01963-201ENST00000562038 CARMIL2Q6F5E8 1435 aa9.44□□□□□ -0.9
LINC01963-201ENST00000562038 NEO1Q92859 1461 aa9.44□□□□□ -0.9
LINC01963-201ENST00000562038 YEATS2Q9ULM3 1422 aa9.43□□□□□ -0.9
LINC01963-201ENST00000562038 CSRNP3Q8WYN3 585 aa9.42□□□□□ -0.9
LINC01963-201ENST00000562038 WDR7Q9Y4E6 1490 aa9.42□□□□□ -0.9
LINC01963-201ENST00000562038 MROH2AA6NES4 1674 aa9.41□□□□□ -0.9
LINC01963-201ENST00000562038 NPM1P06748 294 aaKnown RBP eCLIP9.41□□□□□ -0.9
LINC01963-201ENST00000562038 TNIKQ9UKE5 1360 aa9.39□□□□□ -0.91
LINC01963-201ENST00000562038 MAGI2Q86UL8 1455 aa9.39□□□□□ -0.91
LINC01963-201ENST00000562038 FBLN2P98095 1184 aa9.38□□□□□ -0.91
LINC01963-201ENST00000562038 DMRT2Q9Y5R5 561 aa9.38□□□□□ -0.91
LINC01963-201ENST00000562038 RAPGEF6Q8TEU7 1601 aa9.37□□□□□ -0.91
LINC01963-201ENST00000562038 SETD1BQ9UPS6 1966 aaKnown RBP9.37□□□□□ -0.91
LINC01963-201ENST00000562038 MAP3K1Q13233 1512 aa9.36□□□□□ -0.91
LINC01963-201ENST00000562038 HECW1Q76N89 1606 aa9.36□□□□□ -0.91
LINC01963-201ENST00000562038 UACAQ9BZF9 1416 aa9.35□□□□□ -0.91
LINC01963-201ENST00000562038 SIGLEC1Q9BZZ2 1709 aa9.34□□□□□ -0.91
LINC01963-201ENST00000562038 FANCAO15360 1455 aa9.34□□□□□ -0.91
LINC01963-201ENST00000562038 FMN1Q68DA7 1419 aa9.32□□□□□ -0.92
LINC01963-201ENST00000562038 JPH4Q96JJ6 628 aa9.32□□□□□ -0.92
LINC01963-201ENST00000562038 CCDC18Q5T9S5 1454 aa9.32□□□□□ -0.92
LINC01963-201ENST00000562038 FYCO1Q9BQS8 1478 aa9.32□□□□□ -0.92
LINC01963-201ENST00000562038 CPS1P31327 1500 aa9.31□□□□□ -0.92
LINC01963-201ENST00000562038 FHOD3Q2V2M9 1422 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms