RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 NISCHQ9Y2I1 1504 aa13.97□□□□□ -0.17
LINC01963-201ENST00000562038 CCDC180Q9P1Z9 1646 aa13.1□□□□□ -0.31
LINC01963-201ENST00000562038 ABCC9O60706 1549 aa12.8□□□□□ -0.36
LINC01963-201ENST00000562038 DNAJC5BQ9UF47 199 aa12.7□□□□□ -0.38
LINC01963-201ENST00000562038 DNAJC5Q9H3Z4 198 aa12.69□□□□□ -0.38
LINC01963-201ENST00000562038 SHROOM4Q9ULL8 1493 aa12.54□□□□□ -0.4
LINC01963-201ENST00000562038 RB1CC1Q8TDY2 1594 aa12.5□□□□□ -0.41
LINC01963-201ENST00000562038 UNC13AQ9UPW8 1703 aa12.35□□□□□ -0.43
LINC01963-201ENST00000562038 NACADO15069 1562 aa12.34□□□□□ -0.43
LINC01963-201ENST00000562038 MYO15BQ96JP2 1530 aa12.26□□□□□ -0.45
LINC01963-201ENST00000562038 CUX2O14529 1486 aa12.19□□□□□ -0.46
LINC01963-201ENST00000562038 BICRAQ9NZM4 1560 aa12.17□□□□□ -0.46
LINC01963-201ENST00000562038 CC2D2AQ9P2K1 1620 aa12□□□□□ -0.49
LINC01963-201ENST00000562038 CECR2Q9BXF3 1484 aa11.9□□□□□ -0.5
LINC01963-201ENST00000562038 DCAF1Q9Y4B6 1507 aa11.9□□□□□ -0.5
LINC01963-201ENST00000562038 EIF4G1Q04637 1599 aaKnown RBP11.81□□□□□ -0.52
LINC01963-201ENST00000562038 ZCCHC6Q5VYS8 1495 aaKnown RBP11.74□□□□□ -0.53
LINC01963-201ENST00000562038 THOC2Q8NI27 1593 aaKnown RBP11.54□□□□□ -0.56
LINC01963-201ENST00000562038 PABPN1Q86U42 306 aaKnown RBP eCLIP11.33□□□□□ -0.6
LINC01963-201ENST00000562038 HMGXB3Q12766 1538 aa11.27□□□□□ -0.6
LINC01963-201ENST00000562038 LAMC3Q9Y6N6 1575 aa11.24□□□□□ -0.61
LINC01963-201ENST00000562038 NCAPD3P42695 1498 aa11.24□□□□□ -0.61
LINC01963-201ENST00000562038 BAZ1AQ9NRL2 1556 aaPredicted RBP11.24□□□□□ -0.61
LINC01963-201ENST00000562038 ERCC6Q03468 1493 aa11.18□□□□□ -0.62
LINC01963-201ENST00000562038 RIMBP3CA6NJZ7 1639 aa11.17□□□□□ -0.62
LINC01963-201ENST00000562038 RIMBP3BA6NNM3 1639 aa11.17□□□□□ -0.62
LINC01963-201ENST00000562038 RIMBP3Q9UFD9 1639 aa11.17□□□□□ -0.62
LINC01963-201ENST00000562038 WDR62O43379 1518 aa11.16□□□□□ -0.62
LINC01963-201ENST00000562038 SMARCA2P51531 1590 aa11.14□□□□□ -0.63
LINC01963-201ENST00000562038 SCRIBQ14160 1630 aa11.1□□□□□ -0.63
LINC01963-201ENST00000562038 PEG3Q9GZU2 1588 aa11.08□□□□□ -0.64
LINC01963-201ENST00000562038 KIF21AQ7Z4S6 1674 aa11.07□□□□□ -0.64
LINC01963-201ENST00000562038 TRIM41Q8WV44 630 aa10.94□□□□□ -0.66
LINC01963-201ENST00000562038 MRC2Q9UBG0 1479 aa10.93□□□□□ -0.66
LINC01963-201ENST00000562038 ARHGEF11O15085 1522 aa10.92□□□□□ -0.66
LINC01963-201ENST00000562038 ATAD2BQ9ULI0 1458 aa10.86□□□□□ -0.67
LINC01963-201ENST00000562038 SMARCA4P51532 1647 aa10.86□□□□□ -0.67
LINC01963-201ENST00000562038 PDS5BQ9NTI5 1447 aa10.86□□□□□ -0.67
LINC01963-201ENST00000562038 RSF1Q96T23 1441 aaPredicted RBP10.85□□□□□ -0.67
LINC01963-201ENST00000562038 PRDM2Q13029 1718 aa10.82□□□□□ -0.68
LINC01963-201ENST00000562038 ERCC6L2Q5T890 1561 aa10.82□□□□□ -0.68
LINC01963-201ENST00000562038 WDR97A6NE52 1622 aa10.79□□□□□ -0.68
LINC01963-201ENST00000562038 DCAF8L2P0C7V8 631 aa10.79□□□□□ -0.68
LINC01963-201ENST00000562038 NESP48681 1621 aa10.78□□□□□ -0.68
LINC01963-201ENST00000562038 OSCARQ8IYS5 282 aa10.75□□□□□ -0.69
LINC01963-201ENST00000562038 ARAP1Q96P48 1450 aa10.73□□□□□ -0.69
LINC01963-201ENST00000562038 AEBP2Q6ZN18 517 aaPredicted RBP10.71□□□□□ -0.7
LINC01963-201ENST00000562038 CLASP1Q7Z460 1538 aa10.67□□□□□ -0.7
LINC01963-201ENST00000562038 CHD1O14646 1710 aa10.62□□□□□ -0.71
LINC01963-201ENST00000562038 TOP2AP11388 1531 aaKnown RBP10.62□□□□□ -0.71
LINC01963-201ENST00000562038 MROH2BQ7Z745 1585 aa10.62□□□□□ -0.71
LINC01963-201ENST00000562038 ILDR1Q86SU0 546 aaPredicted RBP10.6□□□□□ -0.71
LINC01963-201ENST00000562038 KIF13AQ9H1H9 1805 aa10.59□□□□□ -0.71
LINC01963-201ENST00000562038 BAZ1BQ9UIG0 1483 aaKnown RBP10.58□□□□□ -0.72
LINC01963-201ENST00000562038 CEP164Q9UPV0 1460 aa10.56□□□□□ -0.72
LINC01963-201ENST00000562038 IFT140Q96RY7 1462 aa10.55□□□□□ -0.72
LINC01963-201ENST00000562038 CADPSQ9ULU8 1353 aa10.55□□□□□ -0.72
LINC01963-201ENST00000562038 WIZO95785 1651 aa10.52□□□□□ -0.73
LINC01963-201ENST00000562038 EIF4G3O43432 1585 aaKnown RBP10.5□□□□□ -0.73
LINC01963-201ENST00000562038 URB2Q14146 1524 aaKnown RBP10.45□□□□□ -0.74
LINC01963-201ENST00000562038 TARBP1Q13395 1621 aaKnown RBP10.43□□□□□ -0.74
LINC01963-201ENST00000562038 CFTRP13569 1480 aa10.43□□□□□ -0.74
LINC01963-201ENST00000562038 ABCC8Q09428 1581 aa10.42□□□□□ -0.74
LINC01963-201ENST00000562038 SYNJ1O43426 1573 aa10.41□□□□□ -0.74
LINC01963-201ENST00000562038 FANCD2Q9BXW9 1451 aa10.4□□□□□ -0.75
LINC01963-201ENST00000562038 SHROOM2Q13796 1616 aa10.38□□□□□ -0.75
LINC01963-201ENST00000562038 HECW2Q9P2P5 1572 aa10.35□□□□□ -0.75
LINC01963-201ENST00000562038 MAPKBP1O60336 1514 aa10.34□□□□□ -0.75
LINC01963-201ENST00000562038 FBXO41Q8TF61 875 aa10.31□□□□□ -0.76
LINC01963-201ENST00000562038 DNMBPQ6XZF7 1577 aa10.28□□□□□ -0.76
LINC01963-201ENST00000562038 CCDC88BA6NC98 1476 aa10.28□□□□□ -0.76
LINC01963-201ENST00000562038 MAGI1Q96QZ7 1491 aaPredicted RBP10.27□□□□□ -0.77
LINC01963-201ENST00000562038 KDM6BO15054 1643 aa10.26□□□□□ -0.77
LINC01963-201ENST00000562038 DIP2BQ9P265 1576 aa10.25□□□□□ -0.77
LINC01963-201ENST00000562038 SOCS7O14512 581 aa10.23□□□□□ -0.77
LINC01963-201ENST00000562038 TOP2BQ02880 1626 aa10.23□□□□□ -0.77
LINC01963-201ENST00000562038 ZNF608Q9ULD9 1512 aaPredicted RBP10.23□□□□□ -0.77
LINC01963-201ENST00000562038 GLI2P10070 1586 aa10.21□□□□□ -0.78
LINC01963-201ENST00000562038 ABCC10Q5T3U5 1492 aa10.2□□□□□ -0.78
LINC01963-201ENST00000562038 TOPBP1Q92547 1522 aa10.2□□□□□ -0.78
LINC01963-201ENST00000562038 BIVM-ERCC5R4GMW8 1640 aa10.19□□□□□ -0.78
LINC01963-201ENST00000562038 TRHP20396 242 aaPredicted RBP10.18□□□□□ -0.78
LINC01963-201ENST00000562038 GAPVD1Q14C86 1478 aa10.17□□□□□ -0.78
LINC01963-201ENST00000562038 PPRC1Q5VV67 1664 aaKnown RBP10.17□□□□□ -0.78
LINC01963-201ENST00000562038 LMTK3Q96Q04 1460 aa10.17□□□□□ -0.78
LINC01963-201ENST00000562038 KDM4FA0A1W2PPD8 638 aa10.17□□□□□ -0.78
LINC01963-201ENST00000562038 PBRM1Q86U86 1689 aa10.15□□□□□ -0.78
LINC01963-201ENST00000562038 CYB5RLQ6IPT4 315 aa10.15□□□□□ -0.79
LINC01963-201ENST00000562038 SYNJ2O15056 1496 aa10.12□□□□□ -0.79
LINC01963-201ENST00000562038 SPATA31D1Q6ZQQ2 1576 aa10.11□□□□□ -0.79
LINC01963-201ENST00000562038 ADGRL1O94910 1474 aa10.1□□□□□ -0.79
LINC01963-201ENST00000562038 IQSEC2Q5JU85 1478 aa10.08□□□□□ -0.8
LINC01963-201ENST00000562038 CEP170Q5SW79 1584 aa10.05□□□□□ -0.8
LINC01963-201ENST00000562038 ABCA5Q8WWZ7 1642 aa10.04□□□□□ -0.8
LINC01963-201ENST00000562038 KIAA0586Q9BVV6 1533 aa10.04□□□□□ -0.8
LINC01963-201ENST00000562038 NUP160Q12769 1436 aa10.02□□□□□ -0.8
LINC01963-201ENST00000562038 MAP3K4Q9Y6R4 1608 aa10.02□□□□□ -0.81
LINC01963-201ENST00000562038 CUX1P39880 1505 aa10.01□□□□□ -0.81
LINC01963-201ENST00000562038 ADAMTSL3P82987 1691 aa10□□□□□ -0.81
LINC01963-201ENST00000562038 GRIN2BQ13224 1484 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms