RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 MAP3K1Q13233 1512 aa19.39■□□□□ 0.69
AC055717.2-201ENST00000561864 ADAMTS12P58397 1594 aa19.36■□□□□ 0.69
AC055717.2-201ENST00000561864 FHAD1B1AJZ9 1412 aa19.36■□□□□ 0.69
AC055717.2-201ENST00000561864 TTBK1Q5TCY1 1321 aaPredicted RBP19.35■□□□□ 0.69
AC055717.2-201ENST00000561864 GRIN2BQ13224 1484 aa19.34■□□□□ 0.69
AC055717.2-201ENST00000561864 SAMD9Q5K651 1589 aa19.32■□□□□ 0.68
AC055717.2-201ENST00000561864 TIAM1Q13009 1591 aa19.31■□□□□ 0.68
AC055717.2-201ENST00000561864 CFAP43Q8NDM7 1665 aa19.3■□□□□ 0.68
AC055717.2-201ENST00000561864 AQRO60306 1485 aaKnown RBP eCLIP19.3■□□□□ 0.68
AC055717.2-201ENST00000561864 PCF11O94913 1555 aaKnown RBP19.29■□□□□ 0.68
AC055717.2-201ENST00000561864 FYCO1Q9BQS8 1478 aa19.27■□□□□ 0.67
AC055717.2-201ENST00000561864 EIF4G3O43432 1585 aaKnown RBP19.25■□□□□ 0.67
AC055717.2-201ENST00000561864 FHOD3Q2V2M9 1422 aa19.23■□□□□ 0.67
AC055717.2-201ENST00000561864 ZNF608Q9ULD9 1512 aaPredicted RBP19.22■□□□□ 0.67
AC055717.2-201ENST00000561864 FMN1Q68DA7 1419 aa19.22■□□□□ 0.67
AC055717.2-201ENST00000561864 CASKIN1Q8WXD9 1431 aa19.22■□□□□ 0.67
AC055717.2-201ENST00000561864 IQGAP2Q13576 1575 aa19.2■□□□□ 0.66
AC055717.2-201ENST00000561864 RRBP1Q9P2E9 1410 aaKnown RBP19.2■□□□□ 0.66
AC055717.2-201ENST00000561864 KANK4Q5T7N3 995 aaPredicted RBP19.19■□□□□ 0.66
AC055717.2-201ENST00000561864 LRRC9Q6ZRR7 1453 aa19.18■□□□□ 0.66
AC055717.2-201ENST00000561864 SNAPC4Q5SXM2 1469 aa19.16■□□□□ 0.66
AC055717.2-201ENST00000561864 MAGI1Q96QZ7 1491 aaPredicted RBP19.16■□□□□ 0.66
AC055717.2-201ENST00000561864 CCER1Q8TC90 406 aaPredicted RBP19.14■□□□□ 0.65
AC055717.2-201ENST00000561864 UGGT2Q9NYU1 1516 aa19.12■□□□□ 0.65
AC055717.2-201ENST00000561864 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.12■□□□□ 0.65
AC055717.2-201ENST00000561864 GRIN2AQ12879 1464 aa19.1■□□□□ 0.65
AC055717.2-201ENST00000561864 P3H3Q8IVL6 736 aa19.1■□□□□ 0.65
AC055717.2-201ENST00000561864 CCNB3Q8WWL7 1395 aa19.07■□□□□ 0.64
AC055717.2-201ENST00000561864 KIAA0586Q9BVV6 1533 aa19.07■□□□□ 0.64
AC055717.2-201ENST00000561864 SYNJ2O15056 1496 aa19.06■□□□□ 0.64
AC055717.2-201ENST00000561864 HNRNPUL2Q1KMD3 747 aaKnown RBP19.05■□□□□ 0.64
AC055717.2-201ENST00000561864 HECW1Q76N89 1606 aa19.04■□□□□ 0.64
AC055717.2-201ENST00000561864 CCDC18Q5T9S5 1454 aa19.03■□□□□ 0.64
AC055717.2-201ENST00000561864 LRRIQ1Q96JM4 1722 aa19.03■□□□□ 0.64
AC055717.2-201ENST00000561864 KIAA0556O60303 1618 aa19■□□□□ 0.63
AC055717.2-201ENST00000561864 EHBP1L1Q8N3D4 1523 aa19■□□□□ 0.63
AC055717.2-201ENST00000561864 PHLDB1Q86UU1 1377 aa18.97■□□□□ 0.63
AC055717.2-201ENST00000561864 CEP170Q5SW79 1584 aa18.97■□□□□ 0.63
AC055717.2-201ENST00000561864 NUP160Q12769 1436 aa18.95■□□□□ 0.62
AC055717.2-201ENST00000561864 ATP1B4Q9UN42 357 aaPredicted RBP18.95■□□□□ 0.62
AC055717.2-201ENST00000561864 DISP1Q96F81 1524 aa18.95■□□□□ 0.62
AC055717.2-201ENST00000561864 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.94■□□□□ 0.62
AC055717.2-201ENST00000561864 SUPT6HQ7KZ85 1726 aaKnown RBP18.94■□□□□ 0.62
AC055717.2-201ENST00000561864 MTUS2Q5JR59 1369 aa18.92■□□□□ 0.62
AC055717.2-201ENST00000561864 CHMP7Q8WUX9 453 aaPredicted RBP18.89■□□□□ 0.61
AC055717.2-201ENST00000561864 EPRSP07814 1512 aaKnown RBP18.89■□□□□ 0.61
AC055717.2-201ENST00000561864 CLSPNQ9HAW4 1339 aa18.88■□□□□ 0.61
AC055717.2-201ENST00000561864 ARHGEF11O15085 1522 aa18.88■□□□□ 0.61
AC055717.2-201ENST00000561864 RAPGEF6Q8TEU7 1601 aa18.86■□□□□ 0.61
AC055717.2-201ENST00000561864 NCOA2Q15596 1464 aa18.86■□□□□ 0.61
AC055717.2-201ENST00000561864 FGD6Q6ZV73 1430 aa18.86■□□□□ 0.61
AC055717.2-201ENST00000561864 MAGI3Q5TCQ9 1506 aa18.84■□□□□ 0.61
AC055717.2-201ENST00000561864 MYOM3Q5VTT5 1437 aa18.83■□□□□ 0.6
AC055717.2-201ENST00000561864 CARMIL2Q6F5E8 1435 aa18.83■□□□□ 0.6
AC055717.2-201ENST00000561864 DHX57Q6P158 1386 aaKnown RBP18.82■□□□□ 0.6
AC055717.2-201ENST00000561864 CDK13Q14004 1512 aaKnown RBP18.79■□□□□ 0.6
AC055717.2-201ENST00000561864 FBLN2P98095 1184 aa18.79■□□□□ 0.6
AC055717.2-201ENST00000561864 NUP153P49790 1475 aaKnown RBP18.78■□□□□ 0.6
AC055717.2-201ENST00000561864 SETD5Q9C0A6 1442 aa18.77■□□□□ 0.6
AC055717.2-201ENST00000561864 FAM50AQ14320 339 aaKnown RBP18.77■□□□□ 0.6
AC055717.2-201ENST00000561864 CHD1O14646 1710 aa18.76■□□□□ 0.59
AC055717.2-201ENST00000561864 PTPN23Q9H3S7 1636 aa18.75■□□□□ 0.59
AC055717.2-201ENST00000561864 RAB3GAP2Q9H2M9 1393 aa18.75■□□□□ 0.59
AC055717.2-201ENST00000561864 TCOF1Q13428 1488 aaKnown RBP18.75■□□□□ 0.59
AC055717.2-201ENST00000561864 ITGAEP38570 1179 aa18.73■□□□□ 0.59
AC055717.2-201ENST00000561864 OSCARQ8IYS5 282 aa18.73■□□□□ 0.59
AC055717.2-201ENST00000561864 JPH4Q96JJ6 628 aa18.71■□□□□ 0.59
AC055717.2-201ENST00000561864 MIA2Q96PC5 1412 aa18.71■□□□□ 0.59
AC055717.2-201ENST00000561864 ABCA8O94911 1581 aa18.7■□□□□ 0.58
AC055717.2-201ENST00000561864 SHROOM2Q13796 1616 aa18.69■□□□□ 0.58
AC055717.2-201ENST00000561864 ADCY10Q96PN6 1610 aa18.68■□□□□ 0.58
AC055717.2-201ENST00000561864 PLB1Q6P1J6 1458 aa18.66■□□□□ 0.58
AC055717.2-201ENST00000561864 CDK11AQ9UQ88 783 aaPredicted RBP18.66■□□□□ 0.58
AC055717.2-201ENST00000561864 DNAJC5Q9H3Z4 198 aa18.65■□□□□ 0.58
AC055717.2-201ENST00000561864 HFM1A2PYH4 1435 aa18.65■□□□□ 0.58
AC055717.2-201ENST00000561864 TROQ12816 1431 aaPredicted RBP18.65■□□□□ 0.58
AC055717.2-201ENST00000561864 AKNAQ7Z591 1439 aa18.64■□□□□ 0.57
AC055717.2-201ENST00000561864 ITSN2Q9NZM3 1697 aa18.63■□□□□ 0.57
AC055717.2-201ENST00000561864 MAPKBP1O60336 1514 aa18.63■□□□□ 0.57
AC055717.2-201ENST00000561864 PRG4Q92954 1404 aaPredicted RBP18.62■□□□□ 0.57
AC055717.2-201ENST00000561864 GCC2Q8IWJ2 1684 aa18.62■□□□□ 0.57
AC055717.2-201ENST00000561864 PTPRKQ15262 1439 aa18.6■□□□□ 0.57
AC055717.2-201ENST00000561864 CLASP1Q7Z460 1538 aa18.57■□□□□ 0.56
AC055717.2-201ENST00000561864 NAIPQ13075 1403 aa18.56■□□□□ 0.56
AC055717.2-201ENST00000561864 DNMT1P26358 1616 aaKnown RBP18.56■□□□□ 0.56
AC055717.2-201ENST00000561864 KIF14Q15058 1648 aa18.55■□□□□ 0.56
AC055717.2-201ENST00000561864 ZNF316A6NFI3 1004 aaPredicted RBP18.54■□□□□ 0.56
AC055717.2-201ENST00000561864 PTPRGP23470 1445 aa18.54■□□□□ 0.56
AC055717.2-201ENST00000561864 ARID3CA6NKF2 412 aa18.53■□□□□ 0.56
AC055717.2-201ENST00000561864 ATP10BO94823 1461 aa18.52■□□□□ 0.56
AC055717.2-201ENST00000561864 UACAQ9BZF9 1416 aa18.52■□□□□ 0.56
AC055717.2-201ENST00000561864 DAPK1P53355 1430 aa18.49■□□□□ 0.55
AC055717.2-201ENST00000561864 ROCK1Q13464 1354 aa18.49■□□□□ 0.55
AC055717.2-201ENST00000561864 GPATCH8Q9UKJ3 1502 aaKnown RBP18.49■□□□□ 0.55
AC055717.2-201ENST00000561864 ACIN1Q9UKV3 1341 aaKnown RBP18.48■□□□□ 0.55
AC055717.2-201ENST00000561864 CAMSAP2Q08AD1 1489 aa18.47■□□□□ 0.55
AC055717.2-201ENST00000561864 ABCC10Q5T3U5 1492 aa18.47■□□□□ 0.55
AC055717.2-201ENST00000561864 CROCC2H7BZ55 1655 aa18.46■□□□□ 0.55
AC055717.2-201ENST00000561864 ADGBQ8N7X0 1667 aa18.46■□□□□ 0.55
AC055717.2-201ENST00000561864 CDC42BPAQ5VT25 1732 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms