RNA–Protein interactions for RNA: ENST00000561609.5

PKM-205, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 1,568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-205ENST00000561609 MAGI1Q96QZ7 1491 aaPredicted RBP17.77■□□□□ 0.44
PKM-205ENST00000561609 EFCAB5A4FU69 1503 aa17.73■□□□□ 0.43
PKM-205ENST00000561609 TRIM26Q12899 539 aaPredicted RBP17.7■□□□□ 0.42
PKM-205ENST00000561609 SYNJ2O15056 1496 aa17.7■□□□□ 0.42
PKM-205ENST00000561609 GRIN2AQ12879 1464 aa17.7■□□□□ 0.42
PKM-205ENST00000561609 SAMD9Q5K651 1589 aa17.67■□□□□ 0.42
PKM-205ENST00000561609 PCGF6Q9BYE7 350 aa17.66■□□□□ 0.42
PKM-205ENST00000561609 IQGAP2Q13576 1575 aa17.66■□□□□ 0.42
PKM-205ENST00000561609 PPARGC1BQ86YN6 1023 aaKnown RBP17.64■□□□□ 0.41
PKM-205ENST00000561609 KIAA0586Q9BVV6 1533 aa17.62■□□□□ 0.41
PKM-205ENST00000561609 CHMP7Q8WUX9 453 aaPredicted RBP17.62■□□□□ 0.41
PKM-205ENST00000561609 FHOD3Q2V2M9 1422 aa17.61■□□□□ 0.41
PKM-205ENST00000561609 CEP170Q5SW79 1584 aa17.6■□□□□ 0.41
PKM-205ENST00000561609 UGGT2Q9NYU1 1516 aa17.6■□□□□ 0.41
PKM-205ENST00000561609 NUP160Q12769 1436 aa17.59■□□□□ 0.41
PKM-205ENST00000561609 APLP2Q06481 763 aa17.57■□□□□ 0.4
PKM-205ENST00000561609 P3H3Q8IVL6 736 aa17.57■□□□□ 0.4
PKM-205ENST00000561609 PCF11O94913 1555 aaKnown RBP17.55■□□□□ 0.4
PKM-205ENST00000561609 FMN1Q68DA7 1419 aa17.54■□□□□ 0.4
PKM-205ENST00000561609 FBLN2P98095 1184 aa17.54■□□□□ 0.4
PKM-205ENST00000561609 MAP3K1Q13233 1512 aa17.54■□□□□ 0.4
PKM-205ENST00000561609 FYCO1Q9BQS8 1478 aa17.52■□□□□ 0.4
PKM-205ENST00000561609 CASKIN1Q8WXD9 1431 aa17.52■□□□□ 0.4
PKM-205ENST00000561609 CHD1O14646 1710 aa17.51■□□□□ 0.39
PKM-205ENST00000561609 TIAM1Q13009 1591 aa17.5■□□□□ 0.39
PKM-205ENST00000561609 KIAA0556O60303 1618 aa17.49■□□□□ 0.39
PKM-205ENST00000561609 DISP1Q96F81 1524 aa17.49■□□□□ 0.39
PKM-205ENST00000561609 TTBK1Q5TCY1 1321 aaPredicted RBP17.49■□□□□ 0.39
PKM-205ENST00000561609 CFAP43Q8NDM7 1665 aa17.48■□□□□ 0.39
PKM-205ENST00000561609 KANK4Q5T7N3 995 aaPredicted RBP17.45■□□□□ 0.38
PKM-205ENST00000561609 JPH4Q96JJ6 628 aa17.42■□□□□ 0.38
PKM-205ENST00000561609 LRRC9Q6ZRR7 1453 aa17.4■□□□□ 0.38
PKM-205ENST00000561609 LRRIQ1Q96JM4 1722 aa17.4■□□□□ 0.38
PKM-205ENST00000561609 CARMIL2Q6F5E8 1435 aa17.38■□□□□ 0.37
PKM-205ENST00000561609 HECW1Q76N89 1606 aa17.38■□□□□ 0.37
PKM-205ENST00000561609 ATP1B4Q9UN42 357 aaPredicted RBP17.37■□□□□ 0.37
PKM-205ENST00000561609 SHROOM2Q13796 1616 aa17.36■□□□□ 0.37
PKM-205ENST00000561609 CCDC18Q5T9S5 1454 aa17.35■□□□□ 0.37
PKM-205ENST00000561609 CLASP1Q7Z460 1538 aa17.33■□□□□ 0.36
PKM-205ENST00000561609 RAPGEF6Q8TEU7 1601 aa17.32■□□□□ 0.36
PKM-205ENST00000561609 PRG4Q92954 1404 aaPredicted RBP17.31■□□□□ 0.36
PKM-205ENST00000561609 EPRSP07814 1512 aaKnown RBP17.3■□□□□ 0.36
PKM-205ENST00000561609 RRBP1Q9P2E9 1410 aaKnown RBP17.3■□□□□ 0.36
PKM-205ENST00000561609 NUP153P49790 1475 aaKnown RBP17.27■□□□□ 0.36
PKM-205ENST00000561609 EHBP1L1Q8N3D4 1523 aa17.26■□□□□ 0.35
PKM-205ENST00000561609 MTUS2Q5JR59 1369 aa17.25■□□□□ 0.35
PKM-205ENST00000561609 PLB1Q6P1J6 1458 aa17.25■□□□□ 0.35
PKM-205ENST00000561609 ABCA8O94911 1581 aa17.25■□□□□ 0.35
PKM-205ENST00000561609 CDK13Q14004 1512 aaKnown RBP17.25■□□□□ 0.35
PKM-205ENST00000561609 MAGI3Q5TCQ9 1506 aa17.24■□□□□ 0.35
PKM-205ENST00000561609 PHLDB1Q86UU1 1377 aa17.23■□□□□ 0.35
PKM-205ENST00000561609 SUPT6HQ7KZ85 1726 aaKnown RBP17.21■□□□□ 0.35
PKM-205ENST00000561609 CCNB3Q8WWL7 1395 aa17.21■□□□□ 0.35
PKM-205ENST00000561609 PTPRGP23470 1445 aa17.2■□□□□ 0.34
PKM-205ENST00000561609 ERCC6L2Q5T890 1561 aa17.2■□□□□ 0.34
PKM-205ENST00000561609 ARHGEF11O15085 1522 aa17.19■□□□□ 0.34
PKM-205ENST00000561609 NCOA2Q15596 1464 aa17.18■□□□□ 0.34
PKM-205ENST00000561609 HRCP23327 699 aa17.18■□□□□ 0.34
PKM-205ENST00000561609 ARID3CA6NKF2 412 aa17.14■□□□□ 0.33
PKM-205ENST00000561609 HNRNPUL2Q1KMD3 747 aaKnown RBP17.14■□□□□ 0.33
PKM-205ENST00000561609 UACAQ9BZF9 1416 aa17.12■□□□□ 0.33
PKM-205ENST00000561609 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.12■□□□□ 0.335e-8■□□□□ 8.5
PKM-205ENST00000561609 CDK11AQ9UQ88 783 aaPredicted RBP17.12■□□□□ 0.33
PKM-205ENST00000561609 ATP10BO94823 1461 aa17.12■□□□□ 0.33
PKM-205ENST00000561609 MYOM3Q5VTT5 1437 aa17.12■□□□□ 0.33
PKM-205ENST00000561609 FGD6Q6ZV73 1430 aa17.12■□□□□ 0.33
PKM-205ENST00000561609 OSCARQ8IYS5 282 aa17.11■□□□□ 0.33
PKM-205ENST00000561609 TROQ12816 1431 aaPredicted RBP17.1■□□□□ 0.33
PKM-205ENST00000561609 ADCY10Q96PN6 1610 aa17.09■□□□□ 0.33
PKM-205ENST00000561609 ABCC2Q92887 1545 aa17.08■□□□□ 0.33
PKM-205ENST00000561609 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.08■□□□□ 0.32
PKM-205ENST00000561609 UHRF1BP1LA0JNW5 1464 aa17.05■□□□□ 0.32
PKM-205ENST00000561609 PTPN23Q9H3S7 1636 aa17.04■□□□□ 0.32
PKM-205ENST00000561609 FAM50AQ14320 339 aaKnown RBP17.04■□□□□ 0.32
PKM-205ENST00000561609 MIA2Q96PC5 1412 aa17.04■□□□□ 0.32
PKM-205ENST00000561609 TCOF1Q13428 1488 aaKnown RBP17.03■□□□□ 0.32
PKM-205ENST00000561609 KIF14Q15058 1648 aa17.02■□□□□ 0.31
PKM-205ENST00000561609 PLEKHD1A6NEE1 506 aa17.01■□□□□ 0.31
PKM-205ENST00000561609 ZEB1P37275 1124 aaPredicted RBP16.99■□□□□ 0.31
PKM-205ENST00000561609 ITGAEP38570 1179 aa16.98■□□□□ 0.31
PKM-205ENST00000561609 ITSN2Q9NZM3 1697 aa16.98■□□□□ 0.31
PKM-205ENST00000561609 KDM5BQ9UGL1 1544 aa16.98■□□□□ 0.31
PKM-205ENST00000561609 CCER1Q8TC90 406 aaPredicted RBP16.98■□□□□ 0.31
PKM-205ENST00000561609 ABCC10Q5T3U5 1492 aa16.97■□□□□ 0.31
PKM-205ENST00000561609 ZCCHC11Q5TAX3 1644 aaKnown RBP16.97■□□□□ 0.31
PKM-205ENST00000561609 GPATCH8Q9UKJ3 1502 aaKnown RBP16.95■□□□□ 0.3
PKM-205ENST00000561609 CDC42BPAQ5VT25 1732 aa16.92■□□□□ 0.3
PKM-205ENST00000561609 PTPRKQ15262 1439 aa16.92■□□□□ 0.3
PKM-205ENST00000561609 SETD5Q9C0A6 1442 aa16.91■□□□□ 0.3
PKM-205ENST00000561609 RAB3GAP2Q9H2M9 1393 aa16.88■□□□□ 0.29
PKM-205ENST00000561609 CAMSAP2Q08AD1 1489 aa16.87■□□□□ 0.29
PKM-205ENST00000561609 CFDP1Q9UEE9 299 aaPredicted RBP16.87■□□□□ 0.29
PKM-205ENST00000561609 DNMT1P26358 1616 aaKnown RBP16.87■□□□□ 0.29
PKM-205ENST00000561609 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.86■□□□□ 0.291e-8■□□□□ 9.1
PKM-205ENST00000561609 PREX2Q70Z35 1606 aa16.86■□□□□ 0.29
PKM-205ENST00000561609 HFM1A2PYH4 1435 aa16.85■□□□□ 0.29
PKM-205ENST00000561609 ZNF644Q9H582 1327 aaPredicted RBP16.85■□□□□ 0.29
PKM-205ENST00000561609 TTC37Q6PGP7 1564 aa16.85■□□□□ 0.29
PKM-205ENST00000561609 DAPK1P53355 1430 aa16.85■□□□□ 0.29
PKM-205ENST00000561609 DHX57Q6P158 1386 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms