RNA–Protein interactions for RNA: ENST00000561334.1

SNX22-207, Transcript of sorting nexin 22, humanhuman

TSL 2

Gene SNX22, Length 2,789 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-207ENST00000561334 WDR62O43379 1518 aa24.6■■□□□ 1.53
SNX22-207ENST00000561334 ERCC6Q03468 1493 aa24.54■■□□□ 1.52
SNX22-207ENST00000561334 DIEXFQ68CQ4 756 aaKnown RBP24.54■■□□□ 1.52
SNX22-207ENST00000561334 PBRM1Q86U86 1689 aa24.52■■□□□ 1.52
SNX22-207ENST00000561334 CTTNBP2Q8WZ74 1663 aa24.51■■□□□ 1.51
SNX22-207ENST00000561334 CENPBP07199 599 aaPredicted RBP24.49■■□□□ 1.51
SNX22-207ENST00000561334 THOC2Q8NI27 1593 aaKnown RBP24.49■■□□□ 1.51
SNX22-207ENST00000561334 AQRO60306 1485 aaKnown RBP eCLIP24.48■■□□□ 1.51
SNX22-207ENST00000561334 APLP2Q06481 763 aa24.47■■□□□ 1.51
SNX22-207ENST00000561334 IFT140Q96RY7 1462 aa24.46■■□□□ 1.51
SNX22-207ENST00000561334 GTF3C3Q9Y5Q9 886 aa24.45■■□□□ 1.5
SNX22-207ENST00000561334 ZNF608Q9ULD9 1512 aaPredicted RBP24.43■■□□□ 1.5
SNX22-207ENST00000561334 GRIN2BQ13224 1484 aa24.37■■□□□ 1.49
SNX22-207ENST00000561334 ADAMTS12P58397 1594 aa24.36■■□□□ 1.49
SNX22-207ENST00000561334 FHAD1B1AJZ9 1412 aa24.35■■□□□ 1.49
SNX22-207ENST00000561334 EFCAB5A4FU69 1503 aa24.34■■□□□ 1.49
SNX22-207ENST00000561334 KANK4Q5T7N3 995 aaPredicted RBP24.33■■□□□ 1.49
SNX22-207ENST00000561334 P3H3Q8IVL6 736 aa24.33■■□□□ 1.49
SNX22-207ENST00000561334 EIF4G3O43432 1585 aaKnown RBP24.32■■□□□ 1.48
SNX22-207ENST00000561334 FHOD3Q2V2M9 1422 aa24.3■■□□□ 1.48
SNX22-207ENST00000561334 PCF11O94913 1555 aaKnown RBP24.25■■□□□ 1.47
SNX22-207ENST00000561334 SAMD9Q5K651 1589 aa24.25■■□□□ 1.47
SNX22-207ENST00000561334 TIAM1Q13009 1591 aa24.23■■□□□ 1.47
SNX22-207ENST00000561334 SNAPC4Q5SXM2 1469 aa24.22■■□□□ 1.47
SNX22-207ENST00000561334 ZNF316A6NFI3 1004 aaPredicted RBP24.22■■□□□ 1.47
SNX22-207ENST00000561334 MAP3K1Q13233 1512 aa24.21■■□□□ 1.47
SNX22-207ENST00000561334 IQGAP2Q13576 1575 aa24.16■■□□□ 1.46
SNX22-207ENST00000561334 CFAP43Q8NDM7 1665 aa24.16■■□□□ 1.46
SNX22-207ENST00000561334 FYCO1Q9BQS8 1478 aa24.15■■□□□ 1.46
SNX22-207ENST00000561334 CASKIN1Q8WXD9 1431 aa24.14■■□□□ 1.45
SNX22-207ENST00000561334 FMN1Q68DA7 1419 aa24.13■■□□□ 1.45
SNX22-207ENST00000561334 MAGI1Q96QZ7 1491 aaPredicted RBP24.11■■□□□ 1.45
SNX22-207ENST00000561334 LRRC9Q6ZRR7 1453 aa24.11■■□□□ 1.45
SNX22-207ENST00000561334 GRIN2AQ12879 1464 aa24.1■■□□□ 1.45
SNX22-207ENST00000561334 HNRNPUL2Q1KMD3 747 aaKnown RBP24.1■■□□□ 1.45
SNX22-207ENST00000561334 ATP1B4Q9UN42 357 aaPredicted RBP24.08■■□□□ 1.45
SNX22-207ENST00000561334 RRBP1Q9P2E9 1410 aaKnown RBP24.07■■□□□ 1.44
SNX22-207ENST00000561334 LRRIQ1Q96JM4 1722 aa24.06■■□□□ 1.44
SNX22-207ENST00000561334 SYNJ2O15056 1496 aa24.04■■□□□ 1.44
SNX22-207ENST00000561334 KIAA0586Q9BVV6 1533 aa24.03■■□□□ 1.44
SNX22-207ENST00000561334 UGGT2Q9NYU1 1516 aa24.03■■□□□ 1.44
SNX22-207ENST00000561334 CHMP7Q8WUX9 453 aaPredicted RBP23.99■■□□□ 1.43
SNX22-207ENST00000561334 CEP170Q5SW79 1584 aa23.99■■□□□ 1.43
SNX22-207ENST00000561334 CCNB3Q8WWL7 1395 aa23.97■■□□□ 1.43
SNX22-207ENST00000561334 YTHDC1Q96MU7 727 aaKnown RBP23.96■■□□□ 1.43
SNX22-207ENST00000561334 PHLDB1Q86UU1 1377 aa23.95■■□□□ 1.42
SNX22-207ENST00000561334 FBLN2P98095 1184 aa23.94■■□□□ 1.42
SNX22-207ENST00000561334 DISP1Q96F81 1524 aa23.94■■□□□ 1.42
SNX22-207ENST00000561334 MIER1Q8N108 512 aa23.93■■□□□ 1.42
SNX22-207ENST00000561334 KIAA0556O60303 1618 aa23.93■■□□□ 1.42
SNX22-207ENST00000561334 NUP160Q12769 1436 aa23.89■■□□□ 1.42
SNX22-207ENST00000561334 HECW1Q76N89 1606 aa23.86■■□□□ 1.41
SNX22-207ENST00000561334 MTUS2Q5JR59 1369 aa23.83■■□□□ 1.41
SNX22-207ENST00000561334 CCDC18Q5T9S5 1454 aa23.82■■□□□ 1.4
SNX22-207ENST00000561334 MAGI3Q5TCQ9 1506 aa23.81■■□□□ 1.4
SNX22-207ENST00000561334 EPRSP07814 1512 aaKnown RBP23.8■■□□□ 1.4
SNX22-207ENST00000561334 ITGAEP38570 1179 aa23.78■■□□□ 1.4
SNX22-207ENST00000561334 EHBP1L1Q8N3D4 1523 aa23.77■■□□□ 1.4
SNX22-207ENST00000561334 CDK13Q14004 1512 aaKnown RBP23.77■■□□□ 1.4
SNX22-207ENST00000561334 CHD1O14646 1710 aa23.77■■□□□ 1.39
SNX22-207ENST00000561334 SUPT6HQ7KZ85 1726 aaKnown RBP23.76■■□□□ 1.39
SNX22-207ENST00000561334 JPH4Q96JJ6 628 aa23.75■■□□□ 1.39
SNX22-207ENST00000561334 NCOA2Q15596 1464 aa23.74■■□□□ 1.39
SNX22-207ENST00000561334 RAPGEF6Q8TEU7 1601 aa23.74■■□□□ 1.39
SNX22-207ENST00000561334 FAM50AQ14320 339 aaKnown RBP23.73■■□□□ 1.39
SNX22-207ENST00000561334 FGD6Q6ZV73 1430 aa23.71■■□□□ 1.39
SNX22-207ENST00000561334 ARID3CA6NKF2 412 aa23.7■■□□□ 1.39
SNX22-207ENST00000561334 NUP153P49790 1475 aaKnown RBP23.7■■□□□ 1.38
SNX22-207ENST00000561334 ARHGEF11O15085 1522 aa23.7■■□□□ 1.38
SNX22-207ENST00000561334 CARMIL2Q6F5E8 1435 aa23.69■■□□□ 1.38
SNX22-207ENST00000561334 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.68■■□□□ 1.38
SNX22-207ENST00000561334 MYOM3Q5VTT5 1437 aa23.66■■□□□ 1.38
SNX22-207ENST00000561334 PLB1Q6P1J6 1458 aa23.65■■□□□ 1.38
SNX22-207ENST00000561334 DHX57Q6P158 1386 aaKnown RBP23.65■■□□□ 1.38
SNX22-207ENST00000561334 RAB3GAP2Q9H2M9 1393 aa23.59■■□□□ 1.37
SNX22-207ENST00000561334 CLSPNQ9HAW4 1339 aa23.59■■□□□ 1.37
SNX22-207ENST00000561334 PTPN23Q9H3S7 1636 aa23.58■■□□□ 1.36
SNX22-207ENST00000561334 PRG4Q92954 1404 aaPredicted RBP23.57■■□□□ 1.36
SNX22-207ENST00000561334 SETD5Q9C0A6 1442 aa23.57■■□□□ 1.36
SNX22-207ENST00000561334 SHROOM2Q13796 1616 aa23.54■■□□□ 1.36
SNX22-207ENST00000561334 ABCA8O94911 1581 aa23.54■■□□□ 1.36
SNX22-207ENST00000561334 PTPRKQ15262 1439 aa23.52■■□□□ 1.36
SNX22-207ENST00000561334 TCOF1Q13428 1488 aaKnown RBP23.5■■□□□ 1.35
SNX22-207ENST00000561334 CDK11AQ9UQ88 783 aaPredicted RBP23.47■■□□□ 1.35
SNX22-207ENST00000561334 MIA2Q96PC5 1412 aa23.46■■□□□ 1.35
SNX22-207ENST00000561334 TROQ12816 1431 aaPredicted RBP23.45■■□□□ 1.34
SNX22-207ENST00000561334 PTPRGP23470 1445 aa23.44■■□□□ 1.34
SNX22-207ENST00000561334 ERCC6L2Q5T890 1561 aa23.44■■□□□ 1.34
SNX22-207ENST00000561334 CLASP1Q7Z460 1538 aa23.42■■□□□ 1.34
SNX22-207ENST00000561334 ATP10BO94823 1461 aa23.42■■□□□ 1.34
SNX22-207ENST00000561334 SUPT16HQ9Y5B9 1047 aaKnown RBP23.42■■□□□ 1.34
SNX22-207ENST00000561334 ADCY10Q96PN6 1610 aa23.42■■□□□ 1.34
SNX22-207ENST00000561334 KIF14Q15058 1648 aa23.42■■□□□ 1.34
SNX22-207ENST00000561334 MAPKBP1O60336 1514 aa23.41■■□□□ 1.34
SNX22-207ENST00000561334 HFM1A2PYH4 1435 aa23.4■■□□□ 1.34
SNX22-207ENST00000561334 NAIPQ13075 1403 aa23.35■■□□□ 1.33
SNX22-207ENST00000561334 BCL11AQ9H165 835 aa23.33■■□□□ 1.33
SNX22-207ENST00000561334 ITSN2Q9NZM3 1697 aa23.33■■□□□ 1.33
SNX22-207ENST00000561334 UACAQ9BZF9 1416 aa23.32■■□□□ 1.32
SNX22-207ENST00000561334 ZNF644Q9H582 1327 aaPredicted RBP23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms