RNA–Protein interactions for RNA: ENST00000561334.1

SNX22-207, Transcript of sorting nexin 22, humanhuman

TSL 2

Gene SNX22, Length 2,789 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-207ENST00000561334 NISCHQ9Y2I1 1504 aa35.28■■■■□ 3.24
SNX22-207ENST00000561334 CCDC180Q9P1Z9 1646 aa30.56■■■□□ 2.48
SNX22-207ENST00000561334 ZCCHC6Q5VYS8 1495 aaKnown RBP29.7■■■□□ 2.34
SNX22-207ENST00000561334 SHROOM4Q9ULL8 1493 aa29.14■■■□□ 2.26
SNX22-207ENST00000561334 DCAF8L2P0C7V8 631 aa29.13■■■□□ 2.25
SNX22-207ENST00000561334 DCAF1Q9Y4B6 1507 aa29.09■■■□□ 2.25
SNX22-207ENST00000561334 ABCC9O60706 1549 aa28.73■■■□□ 2.19
SNX22-207ENST00000561334 MYO15BQ96JP2 1530 aa28.6■■■□□ 2.17
SNX22-207ENST00000561334 NACADO15069 1562 aa28.38■■■□□ 2.13
SNX22-207ENST00000561334 SCRIBQ14160 1630 aa28.27■■■□□ 2.12
SNX22-207ENST00000561334 SUPT5HO00267 1087 aaKnown RBP28.16■■■□□ 2.1
SNX22-207ENST00000561334 RB1CC1Q8TDY2 1594 aa28.07■■■□□ 2.08
SNX22-207ENST00000561334 UNC13AQ9UPW8 1703 aa27.68■■■□□ 2.02
SNX22-207ENST00000561334 RSF1Q96T23 1441 aaPredicted RBP27.52■■■□□ 2
SNX22-207ENST00000561334 CECR2Q9BXF3 1484 aa27.47■■□□□ 1.99
SNX22-207ENST00000561334 MROH2BQ7Z745 1585 aa27.33■■□□□ 1.97
SNX22-207ENST00000561334 BICRAQ9NZM4 1560 aa27.32■■□□□ 1.96
SNX22-207ENST00000561334 PABPN1Q86U42 306 aaKnown RBP eCLIP27.2■■□□□ 1.94
SNX22-207ENST00000561334 BAZ1AQ9NRL2 1556 aaPredicted RBP27.18■■□□□ 1.94
SNX22-207ENST00000561334 WIZO95785 1651 aa27.15■■□□□ 1.94
SNX22-207ENST00000561334 CHIC1Q5VXU3 224 aa27.09■■□□□ 1.93
SNX22-207ENST00000561334 SMARCA4P51532 1647 aa27.07■■□□□ 1.92
SNX22-207ENST00000561334 HRCP23327 699 aa26.92■■□□□ 1.9
SNX22-207ENST00000561334 TOP2AP11388 1531 aaKnown RBP26.77■■□□□ 1.88
SNX22-207ENST00000561334 PEG3Q9GZU2 1588 aa26.68■■□□□ 1.86
SNX22-207ENST00000561334 SMARCA2P51531 1590 aa26.58■■□□□ 1.85
SNX22-207ENST00000561334 CCDC88BA6NC98 1476 aa26.56■■□□□ 1.84
SNX22-207ENST00000561334 ATAD2BQ9ULI0 1458 aa26.53■■□□□ 1.84
SNX22-207ENST00000561334 EIF4G1Q04637 1599 aaKnown RBP26.51■■□□□ 1.83
SNX22-207ENST00000561334 PCGF6Q9BYE7 350 aa26.51■■□□□ 1.83
SNX22-207ENST00000561334 BAZ1BQ9UIG0 1483 aaKnown RBP26.39■■□□□ 1.81
SNX22-207ENST00000561334 TRIM41Q8WV44 630 aa26.39■■□□□ 1.81
SNX22-207ENST00000561334 PPARGC1BQ86YN6 1023 aaKnown RBP26.24■■□□□ 1.79
SNX22-207ENST00000561334 NCAPD3P42695 1498 aa26.21■■□□□ 1.79
SNX22-207ENST00000561334 HMGXB3Q12766 1538 aa26.19■■□□□ 1.78
SNX22-207ENST00000561334 ABCC8Q09428 1581 aa26.17■■□□□ 1.78
SNX22-207ENST00000561334 LOC105371045A0A1W2PR82 267 aa26.15■■□□□ 1.78
SNX22-207ENST00000561334 FAM9AQ8IZU1 332 aaPredicted RBP26.01■■□□□ 1.75
SNX22-207ENST00000561334 CC2D2AQ9P2K1 1620 aa25.99■■□□□ 1.75
SNX22-207ENST00000561334 TRIM26Q12899 539 aaPredicted RBP25.9■■□□□ 1.74
SNX22-207ENST00000561334 PELP1Q8IZL8 1130 aaKnown RBP25.87■■□□□ 1.73
SNX22-207ENST00000561334 WRNQ14191 1432 aaPredicted RBP eCLIP25.87■■□□□ 1.73
SNX22-207ENST00000561334 SYNJ1O43426 1573 aa25.81■■□□□ 1.72
SNX22-207ENST00000561334 CFTRP13569 1480 aa25.74■■□□□ 1.71
SNX22-207ENST00000561334 SOGA1O94964 1423 aa25.73■■□□□ 1.71
SNX22-207ENST00000561334 EHMT2Q96KQ7 1210 aa25.7■■□□□ 1.71
SNX22-207ENST00000561334 PRDM2Q13029 1718 aa25.65■■□□□ 1.7
SNX22-207ENST00000561334 RUSC2Q8N2Y8 1516 aa25.65■■□□□ 1.7
SNX22-207ENST00000561334 TOP2BQ02880 1626 aa25.63■■□□□ 1.69
SNX22-207ENST00000561334 BIVM-ERCC5R4GMW8 1640 aa25.6■■□□□ 1.69
SNX22-207ENST00000561334 ZEB1P37275 1124 aaPredicted RBP25.58■■□□□ 1.69
SNX22-207ENST00000561334 CADPSQ9ULU8 1353 aa25.58■■□□□ 1.69
SNX22-207ENST00000561334 EEA1Q15075 1411 aa25.57■■□□□ 1.68
SNX22-207ENST00000561334 CUX1P39880 1505 aa25.51■■□□□ 1.68
SNX22-207ENST00000561334 CSRNP3Q8WYN3 585 aa25.49■■□□□ 1.67
SNX22-207ENST00000561334 DNAJC5BQ9UF47 199 aa25.38■■□□□ 1.65
SNX22-207ENST00000561334 NESP48681 1621 aa25.36■■□□□ 1.65
SNX22-207ENST00000561334 FANCD2Q9BXW9 1451 aa25.32■■□□□ 1.64
SNX22-207ENST00000561334 GOLGA3Q08378 1498 aa25.3■■□□□ 1.64
SNX22-207ENST00000561334 KIF21BO75037 1637 aa25.3■■□□□ 1.64
SNX22-207ENST00000561334 TNIKQ9UKE5 1360 aa25.29■■□□□ 1.64
SNX22-207ENST00000561334 LAMC3Q9Y6N6 1575 aa25.27■■□□□ 1.64
SNX22-207ENST00000561334 CEP164Q9UPV0 1460 aa25.26■■□□□ 1.63
SNX22-207ENST00000561334 SCAF1Q9H7N4 1312 aaKnown RBP25.25■■□□□ 1.63
SNX22-207ENST00000561334 UBTFP17480 764 aaKnown RBP25.22■■□□□ 1.63
SNX22-207ENST00000561334 CEP162Q5TB80 1403 aa25.22■■□□□ 1.63
SNX22-207ENST00000561334 FGD5Q6ZNL6 1462 aa25.17■■□□□ 1.62
SNX22-207ENST00000561334 RAPGEF2Q9Y4G8 1499 aa25.17■■□□□ 1.62
SNX22-207ENST00000561334 KIF27Q86VH2 1401 aa25.15■■□□□ 1.62
SNX22-207ENST00000561334 DNMBPQ6XZF7 1577 aa25.13■■□□□ 1.61
SNX22-207ENST00000561334 PRXQ9BXM0 1461 aa25.1■■□□□ 1.61
SNX22-207ENST00000561334 TOPBP1Q92547 1522 aa25.09■■□□□ 1.61
SNX22-207ENST00000561334 CUX2O14529 1486 aa25.06■■□□□ 1.6
SNX22-207ENST00000561334 ERICH3Q5RHP9 1530 aa25.05■■□□□ 1.6
SNX22-207ENST00000561334 KIF21AQ7Z4S6 1674 aa25.05■■□□□ 1.6
SNX22-207ENST00000561334 PDS5BQ9NTI5 1447 aa25.04■■□□□ 1.6
SNX22-207ENST00000561334 URB2Q14146 1524 aaKnown RBP25.02■■□□□ 1.6
SNX22-207ENST00000561334 POLA1P09884 1462 aaPredicted RBP25.01■■□□□ 1.59
SNX22-207ENST00000561334 RAD54L2Q9Y4B4 1467 aa24.97■■□□□ 1.59
SNX22-207ENST00000561334 IGF1RP08069 1367 aa24.94■■□□□ 1.58
SNX22-207ENST00000561334 CLIP1P30622 1438 aa24.93■■□□□ 1.58
SNX22-207ENST00000561334 ABCA10Q8WWZ4 1543 aa24.92■■□□□ 1.58
SNX22-207ENST00000561334 MYT1Q01538 1121 aa24.91■■□□□ 1.58
SNX22-207ENST00000561334 WDR97A6NE52 1622 aa24.86■■□□□ 1.57
SNX22-207ENST00000561334 RANGAP1P46060 587 aaPredicted RBP24.82■■□□□ 1.56
SNX22-207ENST00000561334 CARMIL1Q5VZK9 1371 aa24.8■■□□□ 1.56
SNX22-207ENST00000561334 VPS8Q8N3P4 1428 aa24.75■■□□□ 1.55
SNX22-207ENST00000561334 ACIN1Q9UKV3 1341 aaKnown RBP24.73■■□□□ 1.55
SNX22-207ENST00000561334 MRC2Q9UBG0 1479 aa24.73■■□□□ 1.55
SNX22-207ENST00000561334 ABCA5Q8WWZ7 1642 aa24.72■■□□□ 1.55
SNX22-207ENST00000561334 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.72■■□□□ 1.55
SNX22-207ENST00000561334 TARBP1Q13395 1621 aaKnown RBP24.71■■□□□ 1.55
SNX22-207ENST00000561334 CCER1Q8TC90 406 aaPredicted RBP24.7■■□□□ 1.54
SNX22-207ENST00000561334 TDRD9Q8NDG6 1382 aaKnown RBP24.69■■□□□ 1.54
SNX22-207ENST00000561334 ARAP1Q96P48 1450 aa24.68■■□□□ 1.54
SNX22-207ENST00000561334 CUL7Q14999 1698 aa24.68■■□□□ 1.54
SNX22-207ENST00000561334 TTBK1Q5TCY1 1321 aaPredicted RBP24.67■■□□□ 1.54
SNX22-207ENST00000561334 GAPVD1Q14C86 1478 aa24.64■■□□□ 1.53
SNX22-207ENST00000561334 NEUROD1Q13562 356 aa24.63■■□□□ 1.53
SNX22-207ENST00000561334 ARHGAP35Q9NRY4 1499 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms