RNA–Protein interactions for RNA: ENST00000560945.1

SNX22-205, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-205ENST00000560945 FBLN2P98095 1184 aa35.44■■■■□ 3.26
SNX22-205ENST00000560945 CHMP7Q8WUX9 453 aaPredicted RBP35.44■■■■□ 3.26
SNX22-205ENST00000560945 ARHGAP35Q9NRY4 1499 aa35.42■■■■□ 3.26
SNX22-205ENST00000560945 ARAP1Q96P48 1450 aa35.39■■■■□ 3.26
SNX22-205ENST00000560945 CEP170Q5SW79 1584 aa35.31■■■■□ 3.24
SNX22-205ENST00000560945 IQGAP2Q13576 1575 aa35.27■■■■□ 3.24
SNX22-205ENST00000560945 VPS8Q8N3P4 1428 aa35.27■■■■□ 3.24
SNX22-205ENST00000560945 P3H3Q8IVL6 736 aa35.27■■■■□ 3.24
SNX22-205ENST00000560945 CHD1O14646 1710 aa35.26■■■■□ 3.24
SNX22-205ENST00000560945 NUP160Q12769 1436 aa35.24■■■■□ 3.23
SNX22-205ENST00000560945 KIAA0586Q9BVV6 1533 aa35.23■■■■□ 3.23
SNX22-205ENST00000560945 EFCAB5A4FU69 1503 aa35.18■■■■□ 3.22
SNX22-205ENST00000560945 FHOD3Q2V2M9 1422 aa35.18■■■■□ 3.22
SNX22-205ENST00000560945 SAMD9Q5K651 1589 aa35.16■■■■□ 3.22
SNX22-205ENST00000560945 PPARGC1BQ86YN6 1023 aaKnown RBP35.15■■■■□ 3.22
SNX22-205ENST00000560945 UGGT2Q9NYU1 1516 aa35.09■■■■□ 3.21
SNX22-205ENST00000560945 DISP1Q96F81 1524 aa34.99■■■■□ 3.19
SNX22-205ENST00000560945 JPH4Q96JJ6 628 aa34.96■■■■□ 3.19
SNX22-205ENST00000560945 KIAA0556O60303 1618 aa34.94■■■■□ 3.18
SNX22-205ENST00000560945 TTBK1Q5TCY1 1321 aaPredicted RBP34.93■■■■□ 3.18
SNX22-205ENST00000560945 PCF11O94913 1555 aaKnown RBP34.92■■■■□ 3.18
SNX22-205ENST00000560945 FMN1Q68DA7 1419 aa34.87■■■■□ 3.17
SNX22-205ENST00000560945 CLASP1Q7Z460 1538 aa34.83■■■■□ 3.17
SNX22-205ENST00000560945 APLP2Q06481 763 aa34.83■■■■□ 3.17
SNX22-205ENST00000560945 OSCARQ8IYS5 282 aa34.81■■■■□ 3.16
SNX22-205ENST00000560945 ATP1B4Q9UN42 357 aaPredicted RBP34.81■■■■□ 3.16
SNX22-205ENST00000560945 CASKIN1Q8WXD9 1431 aa34.81■■■■□ 3.16
SNX22-205ENST00000560945 PRG4Q92954 1404 aaPredicted RBP34.79■■■■□ 3.16
SNX22-205ENST00000560945 FYCO1Q9BQS8 1478 aa34.77■■■■□ 3.16
SNX22-205ENST00000560945 SHROOM2Q13796 1616 aa34.77■■■■□ 3.16
SNX22-205ENST00000560945 CARMIL2Q6F5E8 1435 aa34.76■■■■□ 3.16
SNX22-205ENST00000560945 KANK4Q5T7N3 995 aaPredicted RBP34.74■■■■□ 3.15
SNX22-205ENST00000560945 PCGF6Q9BYE7 350 aa34.69■■■■□ 3.14
SNX22-205ENST00000560945 TIAM1Q13009 1591 aa34.69■■■■□ 3.14
SNX22-205ENST00000560945 ERCC6L2Q5T890 1561 aa34.69■■■■□ 3.14
SNX22-205ENST00000560945 TRIM26Q12899 539 aaPredicted RBP34.68■■■■□ 3.14
SNX22-205ENST00000560945 LRRIQ1Q96JM4 1722 aa34.64■■■■□ 3.14
SNX22-205ENST00000560945 MAP3K1Q13233 1512 aa34.62■■■■□ 3.13
SNX22-205ENST00000560945 CFAP43Q8NDM7 1665 aa34.61■■■■□ 3.13
SNX22-205ENST00000560945 PLB1Q6P1J6 1458 aa34.58■■■■□ 3.13
SNX22-205ENST00000560945 HECW1Q76N89 1606 aa34.57■■■■□ 3.12
SNX22-205ENST00000560945 ARID3CA6NKF2 412 aa34.55■■■■□ 3.12
SNX22-205ENST00000560945 RAPGEF6Q8TEU7 1601 aa34.54■■■■□ 3.12
SNX22-205ENST00000560945 LRRC9Q6ZRR7 1453 aa34.53■■■■□ 3.12
SNX22-205ENST00000560945 PTPRGP23470 1445 aa34.51■■■■□ 3.11
SNX22-205ENST00000560945 NUP153P49790 1475 aaKnown RBP34.5■■■■□ 3.11
SNX22-205ENST00000560945 CDK13Q14004 1512 aaKnown RBP34.5■■■■□ 3.11
SNX22-205ENST00000560945 EPRSP07814 1512 aaKnown RBP34.49■■■■□ 3.11
SNX22-205ENST00000560945 ABCA8O94911 1581 aa34.45■■■■□ 3.11
SNX22-205ENST00000560945 CCDC18Q5T9S5 1454 aa34.43■■■■□ 3.1
SNX22-205ENST00000560945 MAGI3Q5TCQ9 1506 aa34.4■■■■□ 3.1
SNX22-205ENST00000560945 MTUS2Q5JR59 1369 aa34.34■■■■□ 3.09
SNX22-205ENST00000560945 UACAQ9BZF9 1416 aa34.3■■■■□ 3.08
SNX22-205ENST00000560945 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.28■■■■□ 3.08
SNX22-205ENST00000560945 HNRNPUL2Q1KMD3 747 aaKnown RBP34.28■■■■□ 3.08
SNX22-205ENST00000560945 EHBP1L1Q8N3D4 1523 aa34.28■■■■□ 3.08
SNX22-205ENST00000560945 PHLDB1Q86UU1 1377 aa34.26■■■■□ 3.08
SNX22-205ENST00000560945 ARHGEF11O15085 1522 aa34.25■■■■□ 3.07
SNX22-205ENST00000560945 ATP10BO94823 1461 aa34.25■■■■□ 3.07
SNX22-205ENST00000560945 RIMBP3CA6NJZ7 1639 aa34.2■■■■□ 3.07
SNX22-205ENST00000560945 RIMBP3BA6NNM3 1639 aa34.2■■■■□ 3.07
SNX22-205ENST00000560945 ABCC2Q92887 1545 aa34.2■■■■□ 3.07
SNX22-205ENST00000560945 RIMBP3Q9UFD9 1639 aa34.2■■■■□ 3.07
SNX22-205ENST00000560945 NCOA2Q15596 1464 aa34.17■■■■□ 3.06
SNX22-205ENST00000560945 RRBP1Q9P2E9 1410 aaKnown RBP34.15■■■■□ 3.06
SNX22-205ENST00000560945 SUPT6HQ7KZ85 1726 aaKnown RBP34.14■■■■□ 3.06
SNX22-205ENST00000560945 UHRF1BP1LA0JNW5 1464 aa34.1■■■■□ 3.05
SNX22-205ENST00000560945 CDK11AQ9UQ88 783 aaPredicted RBP34.1■■■■□ 3.05
SNX22-205ENST00000560945 TROQ12816 1431 aaPredicted RBP34.09■■■■□ 3.05
SNX22-205ENST00000560945 CCNB3Q8WWL7 1395 aa34.08■■■■□ 3.05
SNX22-205ENST00000560945 ADCY10Q96PN6 1610 aa34.06■■■■□ 3.04
SNX22-205ENST00000560945 PLEKHD1A6NEE1 506 aa34.02■■■■□ 3.04
SNX22-205ENST00000560945 KIF14Q15058 1648 aa34.01■■■■□ 3.03
SNX22-205ENST00000560945 ZCCHC11Q5TAX3 1644 aaKnown RBP34■■■■□ 3.03
SNX22-205ENST00000560945 KDM5BQ9UGL1 1544 aa33.99■■■■□ 3.03
SNX22-205ENST00000560945 MYOM3Q5VTT5 1437 aa33.99■■■■□ 3.03
SNX22-205ENST00000560945 FGD6Q6ZV73 1430 aa33.98■■■■□ 3.03
SNX22-205ENST00000560945 FAM50AQ14320 339 aaKnown RBP33.93■■■■□ 3.02
SNX22-205ENST00000560945 CYB5RLQ6IPT4 315 aa33.93■■■■□ 3.02
SNX22-205ENST00000560945 DNAJC5Q9H3Z4 198 aa33.93■■■■□ 3.02
SNX22-205ENST00000560945 ITGAEP38570 1179 aa33.88■■■■□ 3.01
SNX22-205ENST00000560945 ABCC10Q5T3U5 1492 aa33.85■■■■□ 3.01
SNX22-205ENST00000560945 PTPN23Q9H3S7 1636 aa33.82■■■■□ 3
SNX22-205ENST00000560945 GPATCH8Q9UKJ3 1502 aaKnown RBP33.8■■■■□ 3
SNX22-205ENST00000560945 MIA2Q96PC5 1412 aa33.77■■■■□ 3
SNX22-205ENST00000560945 KCNH8Q96L42 1107 aa33.77■■■■□ 3
SNX22-205ENST00000560945 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.77■■■■□ 3
SNX22-205ENST00000560945 TCOF1Q13428 1488 aaKnown RBP33.76■■■□□ 2.99
SNX22-205ENST00000560945 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.73■■■□□ 2.99
SNX22-205ENST00000560945 ZNF644Q9H582 1327 aaPredicted RBP33.72■■■□□ 2.99
SNX22-205ENST00000560945 TTC37Q6PGP7 1564 aa33.72■■■□□ 2.99
SNX22-205ENST00000560945 CDC42BPAQ5VT25 1732 aa33.71■■■□□ 2.99
SNX22-205ENST00000560945 ITSN2Q9NZM3 1697 aa33.71■■■□□ 2.99
SNX22-205ENST00000560945 WDR7Q9Y4E6 1490 aa33.7■■■□□ 2.98
SNX22-205ENST00000560945 ASXL2Q76L83 1435 aa33.69■■■□□ 2.98
SNX22-205ENST00000560945 NPM1P06748 294 aaKnown RBP eCLIP33.68■■■□□ 2.98
SNX22-205ENST00000560945 CFDP1Q9UEE9 299 aaPredicted RBP33.68■■■□□ 2.98
SNX22-205ENST00000560945 PTPRKQ15262 1439 aa33.67■■■□□ 2.98
SNX22-205ENST00000560945 ZNF777Q9ULD5 760 aaPredicted RBP33.63■■■□□ 2.97
SNX22-205ENST00000560945 CAMSAP2Q08AD1 1489 aa33.61■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms