RNA–Protein interactions for RNA: ENST00000560945.1

SNX22-205, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-205ENST00000560945 NISCHQ9Y2I1 1504 aa51.43■■■■■ 5.82
SNX22-205ENST00000560945 CCDC180Q9P1Z9 1646 aa44.9■■■■■ 4.78
SNX22-205ENST00000560945 ZCCHC6Q5VYS8 1495 aaKnown RBP43.15■■■■■ 4.5
SNX22-205ENST00000560945 ABCC9O60706 1549 aa42.93■■■■■ 4.46
SNX22-205ENST00000560945 DCAF8L2P0C7V8 631 aa42.67■■■■■ 4.42
SNX22-205ENST00000560945 DCAF1Q9Y4B6 1507 aa42.43■■■■■ 4.38
SNX22-205ENST00000560945 MYO15BQ96JP2 1530 aa42.01■■■■■ 4.32
SNX22-205ENST00000560945 NACADO15069 1562 aa41.91■■■■■ 4.3
SNX22-205ENST00000560945 SHROOM4Q9ULL8 1493 aa41.89■■■■■ 4.3
SNX22-205ENST00000560945 RB1CC1Q8TDY2 1594 aa41.64■■■■■ 4.26
SNX22-205ENST00000560945 SCRIBQ14160 1630 aa41.4■■■■■ 4.22
SNX22-205ENST00000560945 UNC13AQ9UPW8 1703 aa40.86■■■■■ 4.13
SNX22-205ENST00000560945 BICRAQ9NZM4 1560 aa40.5■■■■■ 4.07
SNX22-205ENST00000560945 PABPN1Q86U42 306 aaKnown RBP eCLIP40.46■■■■■ 4.07
SNX22-205ENST00000560945 CECR2Q9BXF3 1484 aa40.09■■■■■ 4.01
SNX22-205ENST00000560945 SUPT5HO00267 1087 aaKnown RBP40.09■■■■■ 4.01
SNX22-205ENST00000560945 RSF1Q96T23 1441 aaPredicted RBP39.82■■■■□ 3.96
SNX22-205ENST00000560945 MROH2BQ7Z745 1585 aa39.79■■■■□ 3.96
SNX22-205ENST00000560945 BAZ1AQ9NRL2 1556 aaPredicted RBP39.69■■■■□ 3.94
SNX22-205ENST00000560945 SMARCA4P51532 1647 aa39.6■■■■□ 3.93
SNX22-205ENST00000560945 WIZO95785 1651 aa39.44■■■■□ 3.9
SNX22-205ENST00000560945 EIF4G1Q04637 1599 aaKnown RBP39.27■■■■□ 3.88
SNX22-205ENST00000560945 PEG3Q9GZU2 1588 aa39.08■■■■□ 3.85
SNX22-205ENST00000560945 ATAD2BQ9ULI0 1458 aa39.05■■■■□ 3.84
SNX22-205ENST00000560945 TOP2AP11388 1531 aaKnown RBP38.96■■■■□ 3.83
SNX22-205ENST00000560945 SMARCA2P51531 1590 aa38.93■■■■□ 3.82
SNX22-205ENST00000560945 CC2D2AQ9P2K1 1620 aa38.84■■■■□ 3.81
SNX22-205ENST00000560945 BAZ1BQ9UIG0 1483 aaKnown RBP38.79■■■■□ 3.8
SNX22-205ENST00000560945 NCAPD3P42695 1498 aa38.72■■■■□ 3.79
SNX22-205ENST00000560945 HMGXB3Q12766 1538 aa38.62■■■■□ 3.77
SNX22-205ENST00000560945 CCDC88BA6NC98 1476 aa38.6■■■■□ 3.77
SNX22-205ENST00000560945 DNAJC5BQ9UF47 199 aa38.5■■■■□ 3.75
SNX22-205ENST00000560945 CHIC1Q5VXU3 224 aa38.18■■■■□ 3.7
SNX22-205ENST00000560945 CFTRP13569 1480 aa37.79■■■■□ 3.64
SNX22-205ENST00000560945 ABCC8Q09428 1581 aa37.75■■■■□ 3.63
SNX22-205ENST00000560945 CADPSQ9ULU8 1353 aa37.73■■■■□ 3.63
SNX22-205ENST00000560945 TRIM41Q8WV44 630 aa37.64■■■■□ 3.62
SNX22-205ENST00000560945 NESP48681 1621 aa37.62■■■■□ 3.61
SNX22-205ENST00000560945 PRDM2Q13029 1718 aa37.49■■■■□ 3.59
SNX22-205ENST00000560945 WRNQ14191 1432 aaPredicted RBP eCLIP37.46■■■■□ 3.59
SNX22-205ENST00000560945 LAMC3Q9Y6N6 1575 aa37.43■■■■□ 3.58
SNX22-205ENST00000560945 SYNJ1O43426 1573 aa37.37■■■■□ 3.57
SNX22-205ENST00000560945 FANCD2Q9BXW9 1451 aa37.33■■■■□ 3.57
SNX22-205ENST00000560945 CUX1P39880 1505 aa37.21■■■■□ 3.55
SNX22-205ENST00000560945 TOP2BQ02880 1626 aa37.17■■■■□ 3.54
SNX22-205ENST00000560945 PDS5BQ9NTI5 1447 aa37.14■■■■□ 3.54
SNX22-205ENST00000560945 BIVM-ERCC5R4GMW8 1640 aa37.13■■■■□ 3.53
SNX22-205ENST00000560945 CEP164Q9UPV0 1460 aa37.1■■■■□ 3.53
SNX22-205ENST00000560945 KIF21AQ7Z4S6 1674 aa37.08■■■■□ 3.53
SNX22-205ENST00000560945 FAM9AQ8IZU1 332 aaPredicted RBP37.06■■■■□ 3.52
SNX22-205ENST00000560945 SOGA1O94964 1423 aa36.97■■■■□ 3.51
SNX22-205ENST00000560945 URB2Q14146 1524 aaKnown RBP36.93■■■■□ 3.5
SNX22-205ENST00000560945 DNMBPQ6XZF7 1577 aa36.91■■■■□ 3.5
SNX22-205ENST00000560945 TOPBP1Q92547 1522 aa36.9■■■■□ 3.5
SNX22-205ENST00000560945 ERCC6Q03468 1493 aa36.9■■■■□ 3.5
SNX22-205ENST00000560945 RUSC2Q8N2Y8 1516 aa36.89■■■■□ 3.5
SNX22-205ENST00000560945 FGD5Q6ZNL6 1462 aa36.84■■■■□ 3.49
SNX22-205ENST00000560945 LOC105371045A0A1W2PR82 267 aa36.78■■■■□ 3.48
SNX22-205ENST00000560945 MRC2Q9UBG0 1479 aa36.74■■■■□ 3.47
SNX22-205ENST00000560945 POLA1P09884 1462 aaPredicted RBP36.71■■■■□ 3.47
SNX22-205ENST00000560945 RAD54L2Q9Y4B4 1467 aa36.64■■■■□ 3.46
SNX22-205ENST00000560945 EEA1Q15075 1411 aa36.64■■■■□ 3.46
SNX22-205ENST00000560945 EHMT2Q96KQ7 1210 aa36.63■■■■□ 3.45
SNX22-205ENST00000560945 THOC2Q8NI27 1593 aaKnown RBP36.6■■■■□ 3.45
SNX22-205ENST00000560945 CSRNP3Q8WYN3 585 aa36.57■■■■□ 3.45
SNX22-205ENST00000560945 WDR62O43379 1518 aa36.56■■■■□ 3.44
SNX22-205ENST00000560945 CUX2O14529 1486 aa36.54■■■■□ 3.44
SNX22-205ENST00000560945 KIF27Q86VH2 1401 aa36.5■■■■□ 3.43
SNX22-205ENST00000560945 ABCA10Q8WWZ4 1543 aa36.45■■■■□ 3.43
SNX22-205ENST00000560945 WDR97A6NE52 1622 aa36.39■■■■□ 3.42
SNX22-205ENST00000560945 TARBP1Q13395 1621 aaKnown RBP36.37■■■■□ 3.41
SNX22-205ENST00000560945 TDRD9Q8NDG6 1382 aaKnown RBP36.3■■■■□ 3.4
SNX22-205ENST00000560945 IGF1RP08069 1367 aa36.27■■■■□ 3.4
SNX22-205ENST00000560945 KIF21BO75037 1637 aa36.25■■■■□ 3.39
SNX22-205ENST00000560945 IFT140Q96RY7 1462 aa36.22■■■■□ 3.39
SNX22-205ENST00000560945 PRXQ9BXM0 1461 aa36.22■■■■□ 3.39
SNX22-205ENST00000560945 GOLGA3Q08378 1498 aa36.21■■■■□ 3.39
SNX22-205ENST00000560945 ABCA5Q8WWZ7 1642 aa36.21■■■■□ 3.39
SNX22-205ENST00000560945 RAPGEF2Q9Y4G8 1499 aa36.2■■■■□ 3.39
SNX22-205ENST00000560945 ZNF608Q9ULD9 1512 aaPredicted RBP36.15■■■■□ 3.38
SNX22-205ENST00000560945 GAPVD1Q14C86 1478 aa36.14■■■■□ 3.38
SNX22-205ENST00000560945 AQRO60306 1485 aaKnown RBP eCLIP36.13■■■■□ 3.37
SNX22-205ENST00000560945 UBTFP17480 764 aaKnown RBP36.09■■■■□ 3.37
SNX22-205ENST00000560945 CARMIL1Q5VZK9 1371 aa36.06■■■■□ 3.36
SNX22-205ENST00000560945 ERICH3Q5RHP9 1530 aa36.05■■■■□ 3.36
SNX22-205ENST00000560945 TNIKQ9UKE5 1360 aa36.03■■■■□ 3.36
SNX22-205ENST00000560945 PBRM1Q86U86 1689 aa35.96■■■■□ 3.35
SNX22-205ENST00000560945 EIF4G3O43432 1585 aaKnown RBP35.96■■■■□ 3.35
SNX22-205ENST00000560945 CUL7Q14999 1698 aa35.92■■■■□ 3.34
SNX22-205ENST00000560945 GRIN2BQ13224 1484 aa35.89■■■■□ 3.34
SNX22-205ENST00000560945 CEP162Q5TB80 1403 aa35.86■■■■□ 3.33
SNX22-205ENST00000560945 ADAMTS12P58397 1594 aa35.77■■■■□ 3.32
SNX22-205ENST00000560945 SNAPC4Q5SXM2 1469 aa35.76■■■■□ 3.32
SNX22-205ENST00000560945 RANGAP1P46060 587 aaPredicted RBP35.73■■■■□ 3.31
SNX22-205ENST00000560945 FHAD1B1AJZ9 1412 aa35.73■■■■□ 3.31
SNX22-205ENST00000560945 CLIP1P30622 1438 aa35.64■■■■□ 3.3
SNX22-205ENST00000560945 MAGI1Q96QZ7 1491 aaPredicted RBP35.59■■■■□ 3.29
SNX22-205ENST00000560945 CTTNBP2Q8WZ74 1663 aa35.5■■■■□ 3.27
SNX22-205ENST00000560945 SYNJ2O15056 1496 aa35.5■■■■□ 3.27
SNX22-205ENST00000560945 GRIN2AQ12879 1464 aa35.49■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms