RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 ERCC6L2Q5T890 1561 aa20.42■□□□□ 0.86
USP8-212ENST00000560730 SHROOM2Q13796 1616 aa20.41■□□□□ 0.86
USP8-212ENST00000560730 JPH4Q96JJ6 628 aa20.37■□□□□ 0.85
USP8-212ENST00000560730 RAPGEF2Q9Y4G8 1499 aa20.36■□□□□ 0.85
USP8-212ENST00000560730 KIAA0586Q9BVV6 1533 aa20.36■□□□□ 0.85
USP8-212ENST00000560730 PRG4Q92954 1404 aaPredicted RBP20.33■□□□□ 0.85
USP8-212ENST00000560730 PRXQ9BXM0 1461 aa20.29■□□□□ 0.84
USP8-212ENST00000560730 CSRNP3Q8WYN3 585 aa20.28■□□□□ 0.84
USP8-212ENST00000560730 FAM9AQ8IZU1 332 aaPredicted RBP20.27■□□□□ 0.83
USP8-212ENST00000560730 IQGAP2Q13576 1575 aa20.24■□□□□ 0.83
USP8-212ENST00000560730 EEA1Q15075 1411 aa20.24■□□□□ 0.83
USP8-212ENST00000560730 CTTNBP2Q8WZ74 1663 aa20.19■□□□□ 0.82
USP8-212ENST00000560730 DISP1Q96F81 1524 aa20.13■□□□□ 0.81
USP8-212ENST00000560730 UGGT2Q9NYU1 1516 aa20.13■□□□□ 0.81
USP8-212ENST00000560730 CARMIL2Q6F5E8 1435 aa20.12■□□□□ 0.81
USP8-212ENST00000560730 TTBK1Q5TCY1 1321 aaPredicted RBP20.1■□□□□ 0.81
USP8-212ENST00000560730 PTPRGP23470 1445 aa20.08■□□□□ 0.8
USP8-212ENST00000560730 TNIKQ9UKE5 1360 aa20.08■□□□□ 0.8
USP8-212ENST00000560730 KIF21BO75037 1637 aa20.07■□□□□ 0.8
USP8-212ENST00000560730 KIAA0556O60303 1618 aa20.06■□□□□ 0.8
USP8-212ENST00000560730 ADCY10Q96PN6 1610 aa20.04■□□□□ 0.8
USP8-212ENST00000560730 EHMT2Q96KQ7 1210 aa20.04■□□□□ 0.8
USP8-212ENST00000560730 TRHP20396 242 aaPredicted RBP20.02■□□□□ 0.8
USP8-212ENST00000560730 GOLGA3Q08378 1498 aa19.99■□□□□ 0.79
USP8-212ENST00000560730 RANGAP1P46060 587 aaPredicted RBP19.95■□□□□ 0.78
USP8-212ENST00000560730 P3H3Q8IVL6 736 aa19.95■□□□□ 0.78
USP8-212ENST00000560730 NPM1P06748 294 aaKnown RBP eCLIP19.93■□□□□ 0.78
USP8-212ENST00000560730 UACAQ9BZF9 1416 aa19.93■□□□□ 0.78
USP8-212ENST00000560730 UBTFP17480 764 aaKnown RBP19.93■□□□□ 0.78
USP8-212ENST00000560730 SAMD9Q5K651 1589 aa19.92■□□□□ 0.78
USP8-212ENST00000560730 UHRF1BP1LA0JNW5 1464 aa19.91■□□□□ 0.78
USP8-212ENST00000560730 ABCC2Q92887 1545 aa19.89■□□□□ 0.77
USP8-212ENST00000560730 PLB1Q6P1J6 1458 aa19.88■□□□□ 0.77
USP8-212ENST00000560730 MAPKBP1O60336 1514 aa19.87■□□□□ 0.77
USP8-212ENST00000560730 KIF13AQ9H1H9 1805 aa19.86■□□□□ 0.77
USP8-212ENST00000560730 ABCA8O94911 1581 aa19.85■□□□□ 0.77
USP8-212ENST00000560730 KDM5BQ9UGL1 1544 aa19.82■□□□□ 0.76
USP8-212ENST00000560730 FHOD3Q2V2M9 1422 aa19.82■□□□□ 0.76
USP8-212ENST00000560730 ZCCHC11Q5TAX3 1644 aaKnown RBP19.8■□□□□ 0.76
USP8-212ENST00000560730 ABCC10Q5T3U5 1492 aa19.79■□□□□ 0.76
USP8-212ENST00000560730 EFCAB5A4FU69 1503 aa19.79■□□□□ 0.76
USP8-212ENST00000560730 FAM69CQ0P6D2 419 aa19.78■□□□□ 0.76
USP8-212ENST00000560730 ASXL2Q76L83 1435 aa19.78■□□□□ 0.76
USP8-212ENST00000560730 DIP2BQ9P265 1576 aa19.77■□□□□ 0.76
USP8-212ENST00000560730 ARID3CA6NKF2 412 aa19.75■□□□□ 0.75
USP8-212ENST00000560730 RAPGEF6Q8TEU7 1601 aa19.74■□□□□ 0.75
USP8-212ENST00000560730 ARHGAP35Q9NRY4 1499 aa19.74■□□□□ 0.75
USP8-212ENST00000560730 ATP10BO94823 1461 aa19.7■□□□□ 0.74
USP8-212ENST00000560730 TSPOAP1O95153 1857 aa19.68■□□□□ 0.74
USP8-212ENST00000560730 NUP153P49790 1475 aaKnown RBP19.68■□□□□ 0.74
USP8-212ENST00000560730 WDR7Q9Y4E6 1490 aa19.66■□□□□ 0.74
USP8-212ENST00000560730 EPRSP07814 1512 aaKnown RBP19.66■□□□□ 0.74
USP8-212ENST00000560730 GLI2P10070 1586 aa19.65■□□□□ 0.74
USP8-212ENST00000560730 LOC105371045A0A1W2PR82 267 aa19.63■□□□□ 0.73
USP8-212ENST00000560730 KCNH8Q96L42 1107 aa19.62■□□□□ 0.73
USP8-212ENST00000560730 FMN1Q68DA7 1419 aa19.61■□□□□ 0.73
USP8-212ENST00000560730 CLIP1P30622 1438 aa19.6■□□□□ 0.73
USP8-212ENST00000560730 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.59■□□□□ 0.73
USP8-212ENST00000560730 HNRNPUL2Q1KMD3 747 aaKnown RBP19.59■□□□□ 0.73
USP8-212ENST00000560730 PPRC1Q5VV67 1664 aaKnown RBP19.59■□□□□ 0.73
USP8-212ENST00000560730 MAP3K4Q9Y6R4 1608 aa19.58■□□□□ 0.72
USP8-212ENST00000560730 ATP1B4Q9UN42 357 aaPredicted RBP19.56■□□□□ 0.72
USP8-212ENST00000560730 CDK13Q14004 1512 aaKnown RBP19.55■□□□□ 0.72
USP8-212ENST00000560730 HECW1Q76N89 1606 aa19.53■□□□□ 0.72
USP8-212ENST00000560730 LRRIQ1Q96JM4 1722 aa19.52■□□□□ 0.72
USP8-212ENST00000560730 CEP162Q5TB80 1403 aa19.51■□□□□ 0.71
USP8-212ENST00000560730 CFAP43Q8NDM7 1665 aa19.51■□□□□ 0.71
USP8-212ENST00000560730 PCF11O94913 1555 aaKnown RBP19.5■□□□□ 0.71
USP8-212ENST00000560730 PLEKHD1A6NEE1 506 aa19.5■□□□□ 0.71
USP8-212ENST00000560730 CD109Q6YHK3 1445 aa19.49■□□□□ 0.71
USP8-212ENST00000560730 CASKIN1Q8WXD9 1431 aa19.48■□□□□ 0.71
USP8-212ENST00000560730 ABCA9Q8IUA7 1624 aa19.47■□□□□ 0.71
USP8-212ENST00000560730 KDM6BO15054 1643 aa19.45■□□□□ 0.7
USP8-212ENST00000560730 TEX14Q8IWB6 1497 aa19.44■□□□□ 0.7
USP8-212ENST00000560730 MAGI3Q5TCQ9 1506 aa19.43■□□□□ 0.7
USP8-212ENST00000560730 COL17A1Q9UMD9 1497 aaPredicted RBP19.42■□□□□ 0.7
USP8-212ENST00000560730 FYCO1Q9BQS8 1478 aa19.41■□□□□ 0.7
USP8-212ENST00000560730 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.4■□□□□ 0.7
USP8-212ENST00000560730 CDK11AQ9UQ88 783 aaPredicted RBP19.38■□□□□ 0.69
USP8-212ENST00000560730 TTC37Q6PGP7 1564 aa19.38■□□□□ 0.69
USP8-212ENST00000560730 CCDC18Q5T9S5 1454 aa19.37■□□□□ 0.69
USP8-212ENST00000560730 TROQ12816 1431 aaPredicted RBP19.36■□□□□ 0.69
USP8-212ENST00000560730 KIF14Q15058 1648 aa19.35■□□□□ 0.69
USP8-212ENST00000560730 NEO1Q92859 1461 aa19.28■□□□□ 0.68
USP8-212ENST00000560730 ARAP3Q8WWN8 1544 aa19.28■□□□□ 0.68
USP8-212ENST00000560730 MYO5CQ9NQX4 1742 aa19.26■□□□□ 0.67
USP8-212ENST00000560730 PLCH2O75038 1416 aa19.26■□□□□ 0.67
USP8-212ENST00000560730 VPS8Q8N3P4 1428 aa19.26■□□□□ 0.67
USP8-212ENST00000560730 FANCAO15360 1455 aa19.26■□□□□ 0.67
USP8-212ENST00000560730 PHLDB1Q86UU1 1377 aa19.25■□□□□ 0.67
USP8-212ENST00000560730 AKNAQ7Z591 1439 aa19.24■□□□□ 0.67
USP8-212ENST00000560730 RAPGEF3O95398 923 aa19.24■□□□□ 0.67
USP8-212ENST00000560730 CFAP74Q9C0B2 1584 aa19.22■□□□□ 0.67
USP8-212ENST00000560730 CDC42BPBQ9Y5S2 1711 aa19.21■□□□□ 0.67
USP8-212ENST00000560730 MTUS2Q5JR59 1369 aa19.2■□□□□ 0.66
USP8-212ENST00000560730 FRMPD1Q5SYB0 1578 aa19.19■□□□□ 0.66
USP8-212ENST00000560730 CDC42BPAQ5VT25 1732 aa19.19■□□□□ 0.66
USP8-212ENST00000560730 EFCAB2Q5VUJ9 269 aa19.18■□□□□ 0.66
USP8-212ENST00000560730 ARHGAP5Q13017 1502 aa19.17■□□□□ 0.66
USP8-212ENST00000560730 TIAM1Q13009 1591 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms