RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 NISCHQ9Y2I1 1504 aa29.44■■■□□ 2.3
USP8-212ENST00000560730 CCDC180Q9P1Z9 1646 aa26.14■■□□□ 1.78
USP8-212ENST00000560730 ABCC9O60706 1549 aa25.66■■□□□ 1.7
USP8-212ENST00000560730 DCAF8L2P0C7V8 631 aa24.65■■□□□ 1.54
USP8-212ENST00000560730 RB1CC1Q8TDY2 1594 aa24.61■■□□□ 1.53
USP8-212ENST00000560730 NACADO15069 1562 aa24.58■■□□□ 1.52
USP8-212ENST00000560730 ZCCHC6Q5VYS8 1495 aaKnown RBP24.5■■□□□ 1.51
USP8-212ENST00000560730 MYO15BQ96JP2 1530 aa24.4■■□□□ 1.5
USP8-212ENST00000560730 DCAF1Q9Y4B6 1507 aa24.3■■□□□ 1.48
USP8-212ENST00000560730 UNC13AQ9UPW8 1703 aa24.15■■□□□ 1.46
USP8-212ENST00000560730 PABPN1Q86U42 306 aaKnown RBP eCLIP24■■□□□ 1.43
USP8-212ENST00000560730 BICRAQ9NZM4 1560 aa23.94■■□□□ 1.42
USP8-212ENST00000560730 SCRIBQ14160 1630 aa23.91■■□□□ 1.42
USP8-212ENST00000560730 DNAJC5BQ9UF47 199 aa23.62■■□□□ 1.37
USP8-212ENST00000560730 SHROOM4Q9ULL8 1493 aa23.55■■□□□ 1.36
USP8-212ENST00000560730 EIF4G1Q04637 1599 aaKnown RBP23.26■■□□□ 1.31
USP8-212ENST00000560730 CC2D2AQ9P2K1 1620 aa23.19■■□□□ 1.3
USP8-212ENST00000560730 CECR2Q9BXF3 1484 aa23.02■■□□□ 1.28
USP8-212ENST00000560730 SMARCA4P51532 1647 aa22.84■■□□□ 1.25
USP8-212ENST00000560730 BAZ1AQ9NRL2 1556 aaPredicted RBP22.79■■□□□ 1.24
USP8-212ENST00000560730 ATAD2BQ9ULI0 1458 aa22.72■■□□□ 1.23
USP8-212ENST00000560730 MROH2BQ7Z745 1585 aa22.72■■□□□ 1.23
USP8-212ENST00000560730 NCAPD3P42695 1498 aa22.69■■□□□ 1.22
USP8-212ENST00000560730 SMARCA2P51531 1590 aa22.66■■□□□ 1.22
USP8-212ENST00000560730 PEG3Q9GZU2 1588 aa22.59■■□□□ 1.21
USP8-212ENST00000560730 HMGXB3Q12766 1538 aa22.57■■□□□ 1.2
USP8-212ENST00000560730 BAZ1BQ9UIG0 1483 aaKnown RBP22.51■■□□□ 1.19
USP8-212ENST00000560730 WIZO95785 1651 aa22.49■■□□□ 1.19
USP8-212ENST00000560730 RSF1Q96T23 1441 aaPredicted RBP22.44■■□□□ 1.18
USP8-212ENST00000560730 NESP48681 1621 aa22.23■■□□□ 1.15
USP8-212ENST00000560730 TOP2AP11388 1531 aaKnown RBP22.19■■□□□ 1.14
USP8-212ENST00000560730 LAMC3Q9Y6N6 1575 aa22.08■■□□□ 1.13
USP8-212ENST00000560730 ERCC6Q03468 1493 aa22.07■■□□□ 1.12
USP8-212ENST00000560730 CADPSQ9ULU8 1353 aa22.04■■□□□ 1.12
USP8-212ENST00000560730 CCDC88BA6NC98 1476 aa21.97■■□□□ 1.11
USP8-212ENST00000560730 KIF21AQ7Z4S6 1674 aa21.95■■□□□ 1.1
USP8-212ENST00000560730 AEBP2Q6ZN18 517 aaPredicted RBP21.93■■□□□ 1.1
USP8-212ENST00000560730 PDS5BQ9NTI5 1447 aa21.93■■□□□ 1.1
USP8-212ENST00000560730 CFTRP13569 1480 aa21.9■■□□□ 1.1
USP8-212ENST00000560730 SUPT5HO00267 1087 aaKnown RBP21.89■■□□□ 1.1
USP8-212ENST00000560730 THOC2Q8NI27 1593 aaKnown RBP21.85■■□□□ 1.09
USP8-212ENST00000560730 CUX2O14529 1486 aa21.82■■□□□ 1.08
USP8-212ENST00000560730 FANCD2Q9BXW9 1451 aa21.79■■□□□ 1.08
USP8-212ENST00000560730 PRDM2Q13029 1718 aa21.76■■□□□ 1.07
USP8-212ENST00000560730 CEP164Q9UPV0 1460 aa21.75■■□□□ 1.07
USP8-212ENST00000560730 MRC2Q9UBG0 1479 aa21.73■■□□□ 1.07
USP8-212ENST00000560730 WDR62O43379 1518 aa21.65■■□□□ 1.06
USP8-212ENST00000560730 URB2Q14146 1524 aaKnown RBP21.6■■□□□ 1.05
USP8-212ENST00000560730 TOPBP1Q92547 1522 aa21.45■■□□□ 1.03
USP8-212ENST00000560730 DNMBPQ6XZF7 1577 aa21.41■■□□□ 1.02
USP8-212ENST00000560730 ABCC8Q09428 1581 aa21.39■■□□□ 1.01
USP8-212ENST00000560730 CUX1P39880 1505 aa21.31■■□□□ 1
USP8-212ENST00000560730 IFT140Q96RY7 1462 aa21.28■■□□□ 1
USP8-212ENST00000560730 POLA1P09884 1462 aaPredicted RBP21.27■■□□□ 1
USP8-212ENST00000560730 ZNF608Q9ULD9 1512 aaPredicted RBP21.26■□□□□ 0.99
USP8-212ENST00000560730 TARBP1Q13395 1621 aaKnown RBP21.24■□□□□ 0.99
USP8-212ENST00000560730 DNAJC5Q9H3Z4 198 aa21.22■□□□□ 0.99
USP8-212ENST00000560730 FGD5Q6ZNL6 1462 aa21.21■□□□□ 0.99
USP8-212ENST00000560730 RAD54L2Q9Y4B4 1467 aa21.21■□□□□ 0.99
USP8-212ENST00000560730 SOGA1O94964 1423 aa21.18■□□□□ 0.98
USP8-212ENST00000560730 EIF4G3O43432 1585 aaKnown RBP21.14■□□□□ 0.97
USP8-212ENST00000560730 AQRO60306 1485 aaKnown RBP eCLIP21.13■□□□□ 0.973e-6■■■□□ 14.6
USP8-212ENST00000560730 WRNQ14191 1432 aaPredicted RBP eCLIP21.13■□□□□ 0.97
USP8-212ENST00000560730 SYNJ1O43426 1573 aa21.11■□□□□ 0.97
USP8-212ENST00000560730 TOP2BQ02880 1626 aa21.1■□□□□ 0.97
USP8-212ENST00000560730 BIVM-ERCC5R4GMW8 1640 aa21.1■□□□□ 0.97
USP8-212ENST00000560730 TDRD9Q8NDG6 1382 aaKnown RBP21.09■□□□□ 0.97
USP8-212ENST00000560730 WDR97A6NE52 1622 aa21.05■□□□□ 0.96
USP8-212ENST00000560730 ABCA10Q8WWZ4 1543 aa21■□□□□ 0.95
USP8-212ENST00000560730 OSCARQ8IYS5 282 aa20.95■□□□□ 0.95
USP8-212ENST00000560730 GAPVD1Q14C86 1478 aa20.93■□□□□ 0.94
USP8-212ENST00000560730 ABCA5Q8WWZ7 1642 aa20.92■□□□□ 0.94
USP8-212ENST00000560730 GRIN2BQ13224 1484 aa20.91■□□□□ 0.94
USP8-212ENST00000560730 CHD1O14646 1710 aa20.91■□□□□ 0.94
USP8-212ENST00000560730 SNAPC4Q5SXM2 1469 aa20.91■□□□□ 0.94
USP8-212ENST00000560730 PBRM1Q86U86 1689 aa20.9■□□□□ 0.94
USP8-212ENST00000560730 FBLN2P98095 1184 aa20.87■□□□□ 0.93
USP8-212ENST00000560730 MAGI1Q96QZ7 1491 aaPredicted RBP20.84■□□□□ 0.93
USP8-212ENST00000560730 CHMP7Q8WUX9 453 aaPredicted RBP20.78■□□□□ 0.92
USP8-212ENST00000560730 SYNJ2O15056 1496 aa20.77■□□□□ 0.92
USP8-212ENST00000560730 ERICH3Q5RHP9 1530 aa20.73■□□□□ 0.91
USP8-212ENST00000560730 ADAMTS12P58397 1594 aa20.72■□□□□ 0.91
USP8-212ENST00000560730 FHAD1B1AJZ9 1412 aa20.67■□□□□ 0.9
USP8-212ENST00000560730 KIF27Q86VH2 1401 aa20.67■□□□□ 0.9
USP8-212ENST00000560730 CHIC1Q5VXU3 224 aa20.67■□□□□ 0.9
USP8-212ENST00000560730 GRIN2AQ12879 1464 aa20.65■□□□□ 0.9
USP8-212ENST00000560730 CLASP1Q7Z460 1538 aa20.65■□□□□ 0.9
USP8-212ENST00000560730 IGF1RP08069 1367 aa20.64■□□□□ 0.9
USP8-212ENST00000560730 RIMBP3CA6NJZ7 1639 aa20.64■□□□□ 0.89
USP8-212ENST00000560730 RIMBP3BA6NNM3 1639 aa20.64■□□□□ 0.89
USP8-212ENST00000560730 RIMBP3Q9UFD9 1639 aa20.64■□□□□ 0.89
USP8-212ENST00000560730 TRIM41Q8WV44 630 aa20.63■□□□□ 0.89
USP8-212ENST00000560730 ARHGEF11O15085 1522 aa20.62■□□□□ 0.89
USP8-212ENST00000560730 RUSC2Q8N2Y8 1516 aa20.58■□□□□ 0.88
USP8-212ENST00000560730 CEP170Q5SW79 1584 aa20.58■□□□□ 0.88
USP8-212ENST00000560730 NUP160Q12769 1436 aa20.57■□□□□ 0.88
USP8-212ENST00000560730 CUL7Q14999 1698 aa20.53■□□□□ 0.88
USP8-212ENST00000560730 CARMIL1Q5VZK9 1371 aa20.5■□□□□ 0.87
USP8-212ENST00000560730 ARAP1Q96P48 1450 aa20.46■□□□□ 0.87
USP8-212ENST00000560730 CYB5RLQ6IPT4 315 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms