RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 EFCAB5A4FU69 1503 aa18.64■□□□□ 0.58
AC087878.1-201ENST00000560709 VPS8Q8N3P4 1428 aa18.64■□□□□ 0.57
AC087878.1-201ENST00000560709 GRIN2AQ12879 1464 aa18.64■□□□□ 0.57
AC087878.1-201ENST00000560709 ARHGAP35Q9NRY4 1499 aa18.59■□□□□ 0.57
AC087878.1-201ENST00000560709 CHMP7Q8WUX9 453 aaPredicted RBP18.58■□□□□ 0.56
AC087878.1-201ENST00000560709 ARAP1Q96P48 1450 aa18.58■□□□□ 0.56
AC087878.1-201ENST00000560709 KIAA0586Q9BVV6 1533 aa18.57■□□□□ 0.56
AC087878.1-201ENST00000560709 IQGAP2Q13576 1575 aa18.56■□□□□ 0.56
AC087878.1-201ENST00000560709 NUP160Q12769 1436 aa18.54■□□□□ 0.56
AC087878.1-201ENST00000560709 RANGAP1P46060 587 aaPredicted RBP18.51■□□□□ 0.55
AC087878.1-201ENST00000560709 SAMD9Q5K651 1589 aa18.51■□□□□ 0.55
AC087878.1-201ENST00000560709 UGGT2Q9NYU1 1516 aa18.5■□□□□ 0.55
AC087878.1-201ENST00000560709 FMN1Q68DA7 1419 aa18.47■□□□□ 0.55
AC087878.1-201ENST00000560709 APLP2Q06481 763 aa18.46■□□□□ 0.55
AC087878.1-201ENST00000560709 CEP170Q5SW79 1584 aa18.46■□□□□ 0.55
AC087878.1-201ENST00000560709 FBLN2P98095 1184 aa18.44■□□□□ 0.54
AC087878.1-201ENST00000560709 FHOD3Q2V2M9 1422 aa18.4■□□□□ 0.54
AC087878.1-201ENST00000560709 MAP3K1Q13233 1512 aa18.4■□□□□ 0.54
AC087878.1-201ENST00000560709 FYCO1Q9BQS8 1478 aa18.39■□□□□ 0.54
AC087878.1-201ENST00000560709 CHD1O14646 1710 aa18.37■□□□□ 0.53
AC087878.1-201ENST00000560709 TRIM26Q12899 539 aaPredicted RBP18.37■□□□□ 0.53
AC087878.1-201ENST00000560709 CARMIL2Q6F5E8 1435 aa18.37■□□□□ 0.53
AC087878.1-201ENST00000560709 CASKIN1Q8WXD9 1431 aa18.37■□□□□ 0.53
AC087878.1-201ENST00000560709 KIAA0556O60303 1618 aa18.36■□□□□ 0.53
AC087878.1-201ENST00000560709 SENP3Q9H4L4 574 aaPredicted RBP18.36■□□□□ 0.53
AC087878.1-201ENST00000560709 DISP1Q96F81 1524 aa18.34■□□□□ 0.53
AC087878.1-201ENST00000560709 P3H3Q8IVL6 736 aa18.32■□□□□ 0.52
AC087878.1-201ENST00000560709 JPH4Q96JJ6 628 aa18.32■□□□□ 0.52
AC087878.1-201ENST00000560709 PCF11O94913 1555 aaKnown RBP18.32■□□□□ 0.52
AC087878.1-201ENST00000560709 TIAM1Q13009 1591 aa18.28■□□□□ 0.52
AC087878.1-201ENST00000560709 SHROOM2Q13796 1616 aa18.27■□□□□ 0.51
AC087878.1-201ENST00000560709 CLASP1Q7Z460 1538 aa18.26■□□□□ 0.51
AC087878.1-201ENST00000560709 HECW1Q76N89 1606 aa18.26■□□□□ 0.51
AC087878.1-201ENST00000560709 CCDC18Q5T9S5 1454 aa18.26■□□□□ 0.51
AC087878.1-201ENST00000560709 CFAP43Q8NDM7 1665 aa18.25■□□□□ 0.51
AC087878.1-201ENST00000560709 PRG4Q92954 1404 aaPredicted RBP18.22■□□□□ 0.51
AC087878.1-201ENST00000560709 PCGF6Q9BYE7 350 aa18.2■□□□□ 0.5
AC087878.1-201ENST00000560709 LRRC9Q6ZRR7 1453 aa18.2■□□□□ 0.5
AC087878.1-201ENST00000560709 RAPGEF6Q8TEU7 1601 aa18.16■□□□□ 0.5
AC087878.1-201ENST00000560709 PPARGC1BQ86YN6 1023 aaKnown RBP18.16■□□□□ 0.5
AC087878.1-201ENST00000560709 ATP1B4Q9UN42 357 aaPredicted RBP18.15■□□□□ 0.5
AC087878.1-201ENST00000560709 EPRSP07814 1512 aaKnown RBP18.13■□□□□ 0.49
AC087878.1-201ENST00000560709 KANK4Q5T7N3 995 aaPredicted RBP18.13■□□□□ 0.49
AC087878.1-201ENST00000560709 PTPRGP23470 1445 aa18.13■□□□□ 0.49
AC087878.1-201ENST00000560709 EHBP1L1Q8N3D4 1523 aa18.13■□□□□ 0.49
AC087878.1-201ENST00000560709 OSCARQ8IYS5 282 aa18.12■□□□□ 0.49
AC087878.1-201ENST00000560709 MTUS2Q5JR59 1369 aa18.11■□□□□ 0.49
AC087878.1-201ENST00000560709 ABCA8O94911 1581 aa18.1■□□□□ 0.49
AC087878.1-201ENST00000560709 NUP153P49790 1475 aaKnown RBP18.09■□□□□ 0.49
AC087878.1-201ENST00000560709 CDK11AQ9UQ88 783 aaPredicted RBP18.08■□□□□ 0.48
AC087878.1-201ENST00000560709 TTBK1Q5TCY1 1321 aaPredicted RBP18.07■□□□□ 0.48
AC087878.1-201ENST00000560709 PLB1Q6P1J6 1458 aa18.07■□□□□ 0.48
AC087878.1-201ENST00000560709 RRBP1Q9P2E9 1410 aaKnown RBP18.06■□□□□ 0.48
AC087878.1-201ENST00000560709 LRRIQ1Q96JM4 1722 aa18.05■□□□□ 0.48
AC087878.1-201ENST00000560709 UACAQ9BZF9 1416 aa18.05■□□□□ 0.48
AC087878.1-201ENST00000560709 SUPT6HQ7KZ85 1726 aaKnown RBP18.03■□□□□ 0.48
AC087878.1-201ENST00000560709 CDK13Q14004 1512 aaKnown RBP18.02■□□□□ 0.47
AC087878.1-201ENST00000560709 UHRF1BP1LA0JNW5 1464 aa18.01■□□□□ 0.47
AC087878.1-201ENST00000560709 ABCC2Q92887 1545 aa18■□□□□ 0.47
AC087878.1-201ENST00000560709 CCNB3Q8WWL7 1395 aa17.99■□□□□ 0.47
AC087878.1-201ENST00000560709 ERCC6L2Q5T890 1561 aa17.99■□□□□ 0.47
AC087878.1-201ENST00000560709 ARHGEF11O15085 1522 aa17.98■□□□□ 0.47
AC087878.1-201ENST00000560709 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.98■□□□□ 0.47
AC087878.1-201ENST00000560709 TROQ12816 1431 aaPredicted RBP17.98■□□□□ 0.47
AC087878.1-201ENST00000560709 NCOA2Q15596 1464 aa17.97■□□□□ 0.47
AC087878.1-201ENST00000560709 PHLDB1Q86UU1 1377 aa17.96■□□□□ 0.47
AC087878.1-201ENST00000560709 MAGI3Q5TCQ9 1506 aa17.96■□□□□ 0.47
AC087878.1-201ENST00000560709 PHF23Q9BUL5 403 aaPredicted RBP17.95■□□□□ 0.46
AC087878.1-201ENST00000560709 ATP10BO94823 1461 aa17.95■□□□□ 0.46
AC087878.1-201ENST00000560709 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.94■□□□□ 0.46
AC087878.1-201ENST00000560709 HNRNPUL2Q1KMD3 747 aaKnown RBP17.94■□□□□ 0.46
AC087878.1-201ENST00000560709 MYOM3Q5VTT5 1437 aa17.94■□□□□ 0.46
AC087878.1-201ENST00000560709 ADCY10Q96PN6 1610 aa17.92■□□□□ 0.46
AC087878.1-201ENST00000560709 PLEKHD1A6NEE1 506 aa17.92■□□□□ 0.46
AC087878.1-201ENST00000560709 MIA2Q96PC5 1412 aa17.91■□□□□ 0.46
AC087878.1-201ENST00000560709 FGD6Q6ZV73 1430 aa17.9■□□□□ 0.46
AC087878.1-201ENST00000560709 KDM5BQ9UGL1 1544 aa17.88■□□□□ 0.45
AC087878.1-201ENST00000560709 ARID3CA6NKF2 412 aa17.87■□□□□ 0.45
AC087878.1-201ENST00000560709 KIF14Q15058 1648 aa17.87■□□□□ 0.45
AC087878.1-201ENST00000560709 TCOF1Q13428 1488 aaKnown RBP17.84■□□□□ 0.45
AC087878.1-201ENST00000560709 ITSN2Q9NZM3 1697 aa17.83■□□□□ 0.44
AC087878.1-201ENST00000560709 ZCCHC11Q5TAX3 1644 aaKnown RBP17.8■□□□□ 0.44
AC087878.1-201ENST00000560709 PTPN23Q9H3S7 1636 aa17.8■□□□□ 0.44
AC087878.1-201ENST00000560709 ABCC10Q5T3U5 1492 aa17.78■□□□□ 0.44
AC087878.1-201ENST00000560709 FAM50AQ14320 339 aaKnown RBP17.78■□□□□ 0.44
AC087878.1-201ENST00000560709 GPATCH8Q9UKJ3 1502 aaKnown RBP17.76■□□□□ 0.43
AC087878.1-201ENST00000560709 HRCP23327 699 aa17.75■□□□□ 0.43
AC087878.1-201ENST00000560709 ZEB1P37275 1124 aaPredicted RBP17.75■□□□□ 0.43
AC087878.1-201ENST00000560709 NPM1P06748 294 aaKnown RBP eCLIP17.73■□□□□ 0.43
AC087878.1-201ENST00000560709 WDR7Q9Y4E6 1490 aa17.72■□□□□ 0.43
AC087878.1-201ENST00000560709 CFDP1Q9UEE9 299 aaPredicted RBP17.72■□□□□ 0.43
AC087878.1-201ENST00000560709 AKNAQ7Z591 1439 aa17.69■□□□□ 0.42
AC087878.1-201ENST00000560709 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.68■□□□□ 0.42
AC087878.1-201ENST00000560709 RIMBP3CA6NJZ7 1639 aa17.68■□□□□ 0.42
AC087878.1-201ENST00000560709 RIMBP3BA6NNM3 1639 aa17.68■□□□□ 0.42
AC087878.1-201ENST00000560709 RIMBP3Q9UFD9 1639 aa17.68■□□□□ 0.42
AC087878.1-201ENST00000560709 CAMSAP2Q08AD1 1489 aa17.68■□□□□ 0.42
AC087878.1-201ENST00000560709 PREX2Q70Z35 1606 aa17.67■□□□□ 0.42
AC087878.1-201ENST00000560709 ACIN1Q9UKV3 1341 aaKnown RBP17.67■□□□□ 0.42
AC087878.1-201ENST00000560709 ARAP3Q8WWN8 1544 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms