RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 NISCHQ9Y2I1 1504 aa27.04■■□□□ 1.92
AC087878.1-201ENST00000560709 CCDC180Q9P1Z9 1646 aa23.71■■□□□ 1.39
AC087878.1-201ENST00000560709 ZCCHC6Q5VYS8 1495 aaKnown RBP22.73■■□□□ 1.23
AC087878.1-201ENST00000560709 DCAF1Q9Y4B6 1507 aa22.5■■□□□ 1.19
AC087878.1-201ENST00000560709 ABCC9O60706 1549 aa22.32■■□□□ 1.16
AC087878.1-201ENST00000560709 MYO15BQ96JP2 1530 aa22.32■■□□□ 1.16
AC087878.1-201ENST00000560709 DCAF8L2P0C7V8 631 aa22.17■■□□□ 1.14
AC087878.1-201ENST00000560709 NACADO15069 1562 aa22.12■■□□□ 1.13
AC087878.1-201ENST00000560709 RB1CC1Q8TDY2 1594 aa21.93■■□□□ 1.1
AC087878.1-201ENST00000560709 SHROOM4Q9ULL8 1493 aa21.76■■□□□ 1.07
AC087878.1-201ENST00000560709 SCRIBQ14160 1630 aa21.62■■□□□ 1.05
AC087878.1-201ENST00000560709 UNC13AQ9UPW8 1703 aa21.29■■□□□ 1
AC087878.1-201ENST00000560709 AEBP2Q6ZN18 517 aaPredicted RBP21.19■□□□□ 0.98
AC087878.1-201ENST00000560709 BICRAQ9NZM4 1560 aa21.14■□□□□ 0.98
AC087878.1-201ENST00000560709 PABPN1Q86U42 306 aaKnown RBP eCLIP20.97■□□□□ 0.95
AC087878.1-201ENST00000560709 BAZ1AQ9NRL2 1556 aaPredicted RBP20.95■□□□□ 0.94
AC087878.1-201ENST00000560709 SUPT5HO00267 1087 aaKnown RBP20.92■□□□□ 0.94
AC087878.1-201ENST00000560709 CECR2Q9BXF3 1484 aa20.9■□□□□ 0.94
AC087878.1-201ENST00000560709 RSF1Q96T23 1441 aaPredicted RBP20.89■□□□□ 0.94
AC087878.1-201ENST00000560709 MROH2BQ7Z745 1585 aa20.8■□□□□ 0.92
AC087878.1-201ENST00000560709 SMARCA4P51532 1647 aa20.8■□□□□ 0.92
AC087878.1-201ENST00000560709 PEG3Q9GZU2 1588 aa20.63■□□□□ 0.89
AC087878.1-201ENST00000560709 WIZO95785 1651 aa20.59■□□□□ 0.89
AC087878.1-201ENST00000560709 EIF4G1Q04637 1599 aaKnown RBP20.57■□□□□ 0.88
AC087878.1-201ENST00000560709 SMARCA2P51531 1590 aa20.55■□□□□ 0.88
AC087878.1-201ENST00000560709 TOP2AP11388 1531 aaKnown RBP20.53■□□□□ 0.88
AC087878.1-201ENST00000560709 ATAD2BQ9ULI0 1458 aa20.5■□□□□ 0.87
AC087878.1-201ENST00000560709 NCAPD3P42695 1498 aa20.39■□□□□ 0.85
AC087878.1-201ENST00000560709 HMGXB3Q12766 1538 aa20.38■□□□□ 0.85
AC087878.1-201ENST00000560709 BAZ1BQ9UIG0 1483 aaKnown RBP20.38■□□□□ 0.85
AC087878.1-201ENST00000560709 CC2D2AQ9P2K1 1620 aa20.25■□□□□ 0.83
AC087878.1-201ENST00000560709 CCDC88BA6NC98 1476 aa20.23■□□□□ 0.83
AC087878.1-201ENST00000560709 CHIC1Q5VXU3 224 aa20.03■□□□□ 0.8
AC087878.1-201ENST00000560709 CFTRP13569 1480 aa19.88■□□□□ 0.77
AC087878.1-201ENST00000560709 CADPSQ9ULU8 1353 aa19.83■□□□□ 0.77
AC087878.1-201ENST00000560709 TRIM41Q8WV44 630 aa19.79■□□□□ 0.76
AC087878.1-201ENST00000560709 PRDM2Q13029 1718 aa19.76■□□□□ 0.75
AC087878.1-201ENST00000560709 WRNQ14191 1432 aaPredicted RBP eCLIP19.72■□□□□ 0.75
AC087878.1-201ENST00000560709 LAMC3Q9Y6N6 1575 aa19.72■□□□□ 0.75
AC087878.1-201ENST00000560709 ABCC8Q09428 1581 aa19.69■□□□□ 0.74
AC087878.1-201ENST00000560709 DNAJC5BQ9UF47 199 aa19.66■□□□□ 0.74
AC087878.1-201ENST00000560709 PDS5BQ9NTI5 1447 aa19.59■□□□□ 0.73
AC087878.1-201ENST00000560709 FANCD2Q9BXW9 1451 aa19.58■□□□□ 0.72
AC087878.1-201ENST00000560709 TOP2BQ02880 1626 aa19.57■□□□□ 0.72
AC087878.1-201ENST00000560709 BIVM-ERCC5R4GMW8 1640 aa19.55■□□□□ 0.72
AC087878.1-201ENST00000560709 SYNJ1O43426 1573 aa19.55■□□□□ 0.72
AC087878.1-201ENST00000560709 NESP48681 1621 aa19.53■□□□□ 0.72
AC087878.1-201ENST00000560709 EEA1Q15075 1411 aa19.51■□□□□ 0.71
AC087878.1-201ENST00000560709 CEP164Q9UPV0 1460 aa19.5■□□□□ 0.71
AC087878.1-201ENST00000560709 CUX1P39880 1505 aa19.48■□□□□ 0.71
AC087878.1-201ENST00000560709 DNMBPQ6XZF7 1577 aa19.42■□□□□ 0.7
AC087878.1-201ENST00000560709 TOPBP1Q92547 1522 aa19.35■□□□□ 0.69
AC087878.1-201ENST00000560709 KIF21AQ7Z4S6 1674 aa19.33■□□□□ 0.68
AC087878.1-201ENST00000560709 SOGA1O94964 1423 aa19.32■□□□□ 0.68
AC087878.1-201ENST00000560709 FGD5Q6ZNL6 1462 aa19.31■□□□□ 0.68
AC087878.1-201ENST00000560709 MRC2Q9UBG0 1479 aa19.3■□□□□ 0.68
AC087878.1-201ENST00000560709 URB2Q14146 1524 aaKnown RBP19.3■□□□□ 0.68
AC087878.1-201ENST00000560709 KIF27Q86VH2 1401 aa19.27■□□□□ 0.68
AC087878.1-201ENST00000560709 FAM9AQ8IZU1 332 aaPredicted RBP19.26■□□□□ 0.67
AC087878.1-201ENST00000560709 ERCC6Q03468 1493 aa19.25■□□□□ 0.67
AC087878.1-201ENST00000560709 CSRNP3Q8WYN3 585 aa19.25■□□□□ 0.67
AC087878.1-201ENST00000560709 POLA1P09884 1462 aaPredicted RBP19.24■□□□□ 0.67
AC087878.1-201ENST00000560709 WDR62O43379 1518 aa19.21■□□□□ 0.67
AC087878.1-201ENST00000560709 ABCA10Q8WWZ4 1543 aa19.2■□□□□ 0.66
AC087878.1-201ENST00000560709 RUSC2Q8N2Y8 1516 aa19.19■□□□□ 0.66
AC087878.1-201ENST00000560709 CUX2O14529 1486 aa19.16■□□□□ 0.66
AC087878.1-201ENST00000560709 KIF21BO75037 1637 aa19.16■□□□□ 0.66
AC087878.1-201ENST00000560709 GOLGA3Q08378 1498 aa19.14■□□□□ 0.65
AC087878.1-201ENST00000560709 LOC105371045A0A1W2PR82 267 aa19.13■□□□□ 0.65
AC087878.1-201ENST00000560709 THOC2Q8NI27 1593 aaKnown RBP19.12■□□□□ 0.65
AC087878.1-201ENST00000560709 WDR97A6NE52 1622 aa19.1■□□□□ 0.65
AC087878.1-201ENST00000560709 ERICH3Q5RHP9 1530 aa19.1■□□□□ 0.65
AC087878.1-201ENST00000560709 RAD54L2Q9Y4B4 1467 aa19.09■□□□□ 0.65
AC087878.1-201ENST00000560709 IFT140Q96RY7 1462 aa19.09■□□□□ 0.65
AC087878.1-201ENST00000560709 PRXQ9BXM0 1461 aa19.08■□□□□ 0.64
AC087878.1-201ENST00000560709 TARBP1Q13395 1621 aaKnown RBP19.05■□□□□ 0.64
AC087878.1-201ENST00000560709 POTEDQ86YR6 584 aa19.05■□□□□ 0.64
AC087878.1-201ENST00000560709 TNIKQ9UKE5 1360 aa19.05■□□□□ 0.64
AC087878.1-201ENST00000560709 IGF1RP08069 1367 aa19.03■□□□□ 0.64
AC087878.1-201ENST00000560709 ABCA5Q8WWZ7 1642 aa19.03■□□□□ 0.64
AC087878.1-201ENST00000560709 GAPVD1Q14C86 1478 aa18.99■□□□□ 0.63
AC087878.1-201ENST00000560709 CUL7Q14999 1698 aa18.98■□□□□ 0.63
AC087878.1-201ENST00000560709 RAPGEF2Q9Y4G8 1499 aa18.97■□□□□ 0.63
AC087878.1-201ENST00000560709 CARMIL1Q5VZK9 1371 aa18.96■□□□□ 0.63
AC087878.1-201ENST00000560709 UBTFP17480 764 aaKnown RBP18.95■□□□□ 0.62
AC087878.1-201ENST00000560709 TDRD9Q8NDG6 1382 aaKnown RBP18.93■□□□□ 0.62
AC087878.1-201ENST00000560709 GRIN2BQ13224 1484 aa18.9■□□□□ 0.62
AC087878.1-201ENST00000560709 EHMT2Q96KQ7 1210 aa18.88■□□□□ 0.61
AC087878.1-201ENST00000560709 CEP162Q5TB80 1403 aa18.88■□□□□ 0.61
AC087878.1-201ENST00000560709 PBRM1Q86U86 1689 aa18.85■□□□□ 0.61
AC087878.1-201ENST00000560709 FHAD1B1AJZ9 1412 aa18.83■□□□□ 0.61
AC087878.1-201ENST00000560709 AQRO60306 1485 aaKnown RBP eCLIP18.83■□□□□ 0.6
AC087878.1-201ENST00000560709 ZNF608Q9ULD9 1512 aaPredicted RBP18.82■□□□□ 0.6
AC087878.1-201ENST00000560709 EIF4G3O43432 1585 aaKnown RBP18.81■□□□□ 0.6
AC087878.1-201ENST00000560709 ADAMTS12P58397 1594 aa18.79■□□□□ 0.6
AC087878.1-201ENST00000560709 MAGI1Q96QZ7 1491 aaPredicted RBP18.78■□□□□ 0.6
AC087878.1-201ENST00000560709 CLIP1P30622 1438 aa18.78■□□□□ 0.6
AC087878.1-201ENST00000560709 SNAPC4Q5SXM2 1469 aa18.71■□□□□ 0.59
AC087878.1-201ENST00000560709 CTTNBP2Q8WZ74 1663 aa18.67■□□□□ 0.58
AC087878.1-201ENST00000560709 SYNJ2O15056 1496 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms