RNA–Protein interactions for RNA: ENST00000560469.5

PBX1-218, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 1,674 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-218ENST00000560469 PCGF6Q9BYE7 350 aa35.18■■■■□ 3.22
PBX1-218ENST00000560469 SNAPC4Q5SXM2 1469 aa35.08■■■■□ 3.21
PBX1-218ENST00000560469 MAGI1Q96QZ7 1491 aaPredicted RBP35.06■■■■□ 3.2
PBX1-218ENST00000560469 EFCAB5A4FU69 1503 aa35.05■■■■□ 3.2
PBX1-218ENST00000560469 PPARGC1BQ86YN6 1023 aaKnown RBP35.01■■■■□ 3.2
PBX1-218ENST00000560469 APLP2Q06481 763 aa34.97■■■■□ 3.19
PBX1-218ENST00000560469 SYNJ2O15056 1496 aa34.92■■■■□ 3.18
PBX1-218ENST00000560469 GRIN2AQ12879 1464 aa34.92■■■■□ 3.18
PBX1-218ENST00000560469 IQGAP2Q13576 1575 aa34.88■■■■□ 3.17
PBX1-218ENST00000560469 SAMD9Q5K651 1589 aa34.88■■■■□ 3.17
PBX1-218ENST00000560469 CHMP7Q8WUX9 453 aaPredicted RBP34.82■■■■□ 3.16
PBX1-218ENST00000560469 FHOD3Q2V2M9 1422 aa34.8■■■■□ 3.16
PBX1-218ENST00000560469 KIAA0586Q9BVV6 1533 aa34.8■■■■□ 3.16
PBX1-218ENST00000560469 P3H3Q8IVL6 736 aa34.79■■■■□ 3.16
PBX1-218ENST00000560469 FMN1Q68DA7 1419 aa34.73■■■■□ 3.15
PBX1-218ENST00000560469 UGGT2Q9NYU1 1516 aa34.72■■■■□ 3.15
PBX1-218ENST00000560469 TTBK1Q5TCY1 1321 aaPredicted RBP34.72■■■■□ 3.15
PBX1-218ENST00000560469 MAP3K1Q13233 1512 aa34.71■■■■□ 3.15
PBX1-218ENST00000560469 PCF11O94913 1555 aaKnown RBP34.67■■■■□ 3.14
PBX1-218ENST00000560469 CEP170Q5SW79 1584 aa34.67■■■■□ 3.14
PBX1-218ENST00000560469 FBLN2P98095 1184 aa34.67■■■■□ 3.14
PBX1-218ENST00000560469 NUP160Q12769 1436 aa34.67■■■■□ 3.14
PBX1-218ENST00000560469 FYCO1Q9BQS8 1478 aa34.66■■■■□ 3.14
PBX1-218ENST00000560469 CASKIN1Q8WXD9 1431 aa34.65■■■■□ 3.14
PBX1-218ENST00000560469 TIAM1Q13009 1591 aa34.61■■■■□ 3.13
PBX1-218ENST00000560469 CFAP43Q8NDM7 1665 aa34.54■■■■□ 3.12
PBX1-218ENST00000560469 KANK4Q5T7N3 995 aaPredicted RBP34.54■■■■□ 3.12
PBX1-218ENST00000560469 KIAA0556O60303 1618 aa34.51■■■■□ 3.12
PBX1-218ENST00000560469 DISP1Q96F81 1524 aa34.5■■■■□ 3.11
PBX1-218ENST00000560469 CHD1O14646 1710 aa34.49■■■■□ 3.11
PBX1-218ENST00000560469 ATP1B4Q9UN42 357 aaPredicted RBP34.46■■■■□ 3.11
PBX1-218ENST00000560469 LRRC9Q6ZRR7 1453 aa34.45■■■■□ 3.1
PBX1-218ENST00000560469 JPH4Q96JJ6 628 aa34.4■■■■□ 3.1
PBX1-218ENST00000560469 CARMIL2Q6F5E8 1435 aa34.38■■■■□ 3.09
PBX1-218ENST00000560469 HECW1Q76N89 1606 aa34.36■■■■□ 3.09
PBX1-218ENST00000560469 LRRIQ1Q96JM4 1722 aa34.31■■■■□ 3.08
PBX1-218ENST00000560469 CCDC18Q5T9S5 1454 aa34.31■■■■□ 3.08
PBX1-218ENST00000560469 HRCP23327 699 aa34.27■■■■□ 3.08
PBX1-218ENST00000560469 RRBP1Q9P2E9 1410 aaKnown RBP34.25■■■■□ 3.07
PBX1-218ENST00000560469 RAPGEF6Q8TEU7 1601 aa34.2■■■■□ 3.07
PBX1-218ENST00000560469 EPRSP07814 1512 aaKnown RBP34.19■■■■□ 3.06
PBX1-218ENST00000560469 SHROOM2Q13796 1616 aa34.19■■■■□ 3.06
PBX1-218ENST00000560469 MTUS2Q5JR59 1369 aa34.18■■■■□ 3.06
PBX1-218ENST00000560469 PRG4Q92954 1404 aaPredicted RBP34.16■■■■□ 3.06
PBX1-218ENST00000560469 EHBP1L1Q8N3D4 1523 aa34.15■■■■□ 3.06
PBX1-218ENST00000560469 CCNB3Q8WWL7 1395 aa34.13■■■■□ 3.05
PBX1-218ENST00000560469 CLASP1Q7Z460 1538 aa34.11■■■■□ 3.05
PBX1-218ENST00000560469 PHLDB1Q86UU1 1377 aa34.1■■■■□ 3.05
PBX1-218ENST00000560469 NUP153P49790 1475 aaKnown RBP34.09■■■■□ 3.05
PBX1-218ENST00000560469 SUPT6HQ7KZ85 1726 aaKnown RBP34.06■■■■□ 3.04
PBX1-218ENST00000560469 CDK13Q14004 1512 aaKnown RBP34.06■■■■□ 3.04
PBX1-218ENST00000560469 HNRNPUL2Q1KMD3 747 aaKnown RBP34.05■■■■□ 3.04
PBX1-218ENST00000560469 PLB1Q6P1J6 1458 aa34.04■■■■□ 3.04
PBX1-218ENST00000560469 MAGI3Q5TCQ9 1506 aa34.02■■■■□ 3.04
PBX1-218ENST00000560469 ABCA8O94911 1581 aa34.01■■■■□ 3.03
PBX1-218ENST00000560469 PTPRGP23470 1445 aa33.99■■■■□ 3.03
PBX1-218ENST00000560469 NCOA2Q15596 1464 aa33.98■■■■□ 3.03
PBX1-218ENST00000560469 ARHGEF11O15085 1522 aa33.95■■■■□ 3.02
PBX1-218ENST00000560469 CDK11AQ9UQ88 783 aaPredicted RBP33.94■■■■□ 3.02
PBX1-218ENST00000560469 ZEB1P37275 1124 aaPredicted RBP33.93■■■■□ 3.02
PBX1-218ENST00000560469 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.92■■■■□ 3.02
PBX1-218ENST00000560469 ARID3CA6NKF2 412 aa33.9■■■■□ 3.02
PBX1-218ENST00000560469 FGD6Q6ZV73 1430 aa33.88■■■■□ 3.01
PBX1-218ENST00000560469 MYOM3Q5VTT5 1437 aa33.88■■■■□ 3.01
PBX1-218ENST00000560469 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.86■■■■□ 3.01
PBX1-218ENST00000560469 ERCC6L2Q5T890 1561 aa33.85■■■■□ 3.01
PBX1-218ENST00000560469 FAM50AQ14320 339 aaKnown RBP33.81■■■■□ 3
PBX1-218ENST00000560469 CCER1Q8TC90 406 aaPredicted RBP33.81■■■■□ 3
PBX1-218ENST00000560469 TROQ12816 1431 aaPredicted RBP33.8■■■■□ 3
PBX1-218ENST00000560469 UACAQ9BZF9 1416 aa33.8■■■■□ 3
PBX1-218ENST00000560469 ATP10BO94823 1461 aa33.78■■■■□ 3
PBX1-218ENST00000560469 OSCARQ8IYS5 282 aa33.73■■■□□ 2.99
PBX1-218ENST00000560469 ADCY10Q96PN6 1610 aa33.73■■■□□ 2.99
PBX1-218ENST00000560469 ITGAEP38570 1179 aa33.72■■■□□ 2.99
PBX1-218ENST00000560469 MIA2Q96PC5 1412 aa33.71■■■□□ 2.99
PBX1-218ENST00000560469 PTPN23Q9H3S7 1636 aa33.71■■■□□ 2.99
PBX1-218ENST00000560469 ABCC2Q92887 1545 aa33.7■■■□□ 2.99
PBX1-218ENST00000560469 PLEKHD1A6NEE1 506 aa33.68■■■□□ 2.98
PBX1-218ENST00000560469 TCOF1Q13428 1488 aaKnown RBP33.68■■■□□ 2.98
PBX1-218ENST00000560469 UHRF1BP1LA0JNW5 1464 aa33.63■■■□□ 2.97
PBX1-218ENST00000560469 KIF14Q15058 1648 aa33.59■■■□□ 2.97
PBX1-218ENST00000560469 ITSN2Q9NZM3 1697 aa33.57■■■□□ 2.96
PBX1-218ENST00000560469 SETD5Q9C0A6 1442 aa33.54■■■□□ 2.96
PBX1-218ENST00000560469 GPATCH8Q9UKJ3 1502 aaKnown RBP33.49■■■□□ 2.95
PBX1-218ENST00000560469 ABCC10Q5T3U5 1492 aa33.48■■■□□ 2.95
PBX1-218ENST00000560469 KDM5BQ9UGL1 1544 aa33.48■■■□□ 2.95
PBX1-218ENST00000560469 RAB3GAP2Q9H2M9 1393 aa33.47■■■□□ 2.95
PBX1-218ENST00000560469 PTPRKQ15262 1439 aa33.45■■■□□ 2.94
PBX1-218ENST00000560469 ZCCHC11Q5TAX3 1644 aaKnown RBP33.45■■■□□ 2.94
PBX1-218ENST00000560469 CFDP1Q9UEE9 299 aaPredicted RBP33.42■■■□□ 2.94
PBX1-218ENST00000560469 DHX57Q6P158 1386 aaKnown RBP33.41■■■□□ 2.94
PBX1-218ENST00000560469 CDC42BPAQ5VT25 1732 aa33.4■■■□□ 2.94
PBX1-218ENST00000560469 CLSPNQ9HAW4 1339 aa33.39■■■□□ 2.94
PBX1-218ENST00000560469 HFM1A2PYH4 1435 aa33.39■■■□□ 2.94
PBX1-218ENST00000560469 DNMT1P26358 1616 aaKnown RBP33.36■■■□□ 2.93
PBX1-218ENST00000560469 CAMSAP2Q08AD1 1489 aa33.35■■■□□ 2.93
PBX1-218ENST00000560469 AKNAQ7Z591 1439 aa33.33■■■□□ 2.93
PBX1-218ENST00000560469 DAPK1P53355 1430 aa33.32■■■□□ 2.92
PBX1-218ENST00000560469 ZNF644Q9H582 1327 aaPredicted RBP33.31■■■□□ 2.92
PBX1-218ENST00000560469 NAIPQ13075 1403 aa33.28■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms