RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 ARHGAP35Q9NRY4 1499 aa22.74■■□□□ 1.23
ZEB1-218ENST00000560196 EFCAB5A4FU69 1503 aa22.68■■□□□ 1.22
ZEB1-218ENST00000560196 RANGAP1P46060 587 aaPredicted RBP22.66■■□□□ 1.22
ZEB1-218ENST00000560196 SYNJ2O15056 1496 aa22.66■■□□□ 1.22
ZEB1-218ENST00000560196 GRIN2AQ12879 1464 aa22.64■■□□□ 1.21
ZEB1-218ENST00000560196 TRIM26Q12899 539 aaPredicted RBP22.61■■□□□ 1.21
ZEB1-218ENST00000560196 KIAA0586Q9BVV6 1533 aa22.57■■□□□ 1.2
ZEB1-218ENST00000560196 IQGAP2Q13576 1575 aa22.57■■□□□ 1.2
ZEB1-218ENST00000560196 SAMD9Q5K651 1589 aa22.57■■□□□ 1.2
ZEB1-218ENST00000560196 CHMP7Q8WUX9 453 aaPredicted RBP22.54■■□□□ 1.2
ZEB1-218ENST00000560196 NUP160Q12769 1436 aa22.52■■□□□ 1.2
ZEB1-218ENST00000560196 UGGT2Q9NYU1 1516 aa22.52■■□□□ 1.19
ZEB1-218ENST00000560196 APLP2Q06481 763 aa22.49■■□□□ 1.19
ZEB1-218ENST00000560196 PCGF6Q9BYE7 350 aa22.48■■□□□ 1.19
ZEB1-218ENST00000560196 FHOD3Q2V2M9 1422 aa22.48■■□□□ 1.19
ZEB1-218ENST00000560196 CEP170Q5SW79 1584 aa22.47■■□□□ 1.19
ZEB1-218ENST00000560196 MAP3K1Q13233 1512 aa22.47■■□□□ 1.19
ZEB1-218ENST00000560196 FMN1Q68DA7 1419 aa22.46■■□□□ 1.19
ZEB1-218ENST00000560196 FYCO1Q9BQS8 1478 aa22.41■■□□□ 1.18
ZEB1-218ENST00000560196 CASKIN1Q8WXD9 1431 aa22.41■■□□□ 1.18
ZEB1-218ENST00000560196 PPARGC1BQ86YN6 1023 aaKnown RBP22.41■■□□□ 1.18
ZEB1-218ENST00000560196 P3H3Q8IVL6 736 aa22.41■■□□□ 1.18
ZEB1-218ENST00000560196 FBLN2P98095 1184 aa22.39■■□□□ 1.17
ZEB1-218ENST00000560196 PCF11O94913 1555 aaKnown RBP22.38■■□□□ 1.17
ZEB1-218ENST00000560196 DISP1Q96F81 1524 aa22.36■■□□□ 1.17
ZEB1-218ENST00000560196 KIAA0556O60303 1618 aa22.35■■□□□ 1.17
ZEB1-218ENST00000560196 CHD1O14646 1710 aa22.34■■□□□ 1.17
ZEB1-218ENST00000560196 TIAM1Q13009 1591 aa22.33■■□□□ 1.17
ZEB1-218ENST00000560196 CFAP43Q8NDM7 1665 aa22.3■■□□□ 1.16
ZEB1-218ENST00000560196 JPH4Q96JJ6 628 aa22.29■■□□□ 1.16
ZEB1-218ENST00000560196 CARMIL2Q6F5E8 1435 aa22.27■■□□□ 1.16
ZEB1-218ENST00000560196 KANK4Q5T7N3 995 aaPredicted RBP22.26■■□□□ 1.15
ZEB1-218ENST00000560196 LRRC9Q6ZRR7 1453 aa22.24■■□□□ 1.15
ZEB1-218ENST00000560196 TTBK1Q5TCY1 1321 aaPredicted RBP22.22■■□□□ 1.15
ZEB1-218ENST00000560196 HECW1Q76N89 1606 aa22.21■■□□□ 1.15
ZEB1-218ENST00000560196 SHROOM2Q13796 1616 aa22.2■■□□□ 1.14
ZEB1-218ENST00000560196 CCDC18Q5T9S5 1454 aa22.19■■□□□ 1.14
ZEB1-218ENST00000560196 CLASP1Q7Z460 1538 aa22.16■■□□□ 1.14
ZEB1-218ENST00000560196 ATP1B4Q9UN42 357 aaPredicted RBP22.15■■□□□ 1.14
ZEB1-218ENST00000560196 PRG4Q92954 1404 aaPredicted RBP22.14■■□□□ 1.13
ZEB1-218ENST00000560196 LRRIQ1Q96JM4 1722 aa22.13■■□□□ 1.13
ZEB1-218ENST00000560196 RAPGEF6Q8TEU7 1601 aa22.12■■□□□ 1.13
ZEB1-218ENST00000560196 RRBP1Q9P2E9 1410 aaKnown RBP22.12■■□□□ 1.13
ZEB1-218ENST00000560196 EPRSP07814 1512 aaKnown RBP22.11■■□□□ 1.13
ZEB1-218ENST00000560196 EHBP1L1Q8N3D4 1523 aa22.07■■□□□ 1.12
ZEB1-218ENST00000560196 NUP153P49790 1475 aaKnown RBP22.07■■□□□ 1.12
ZEB1-218ENST00000560196 MTUS2Q5JR59 1369 aa22.06■■□□□ 1.12
ZEB1-218ENST00000560196 ABCA8O94911 1581 aa22.05■■□□□ 1.12
ZEB1-218ENST00000560196 PTPRGP23470 1445 aa22.02■■□□□ 1.12
ZEB1-218ENST00000560196 PLB1Q6P1J6 1458 aa22.02■■□□□ 1.12
ZEB1-218ENST00000560196 PHLDB1Q86UU1 1377 aa22■■□□□ 1.11
ZEB1-218ENST00000560196 CCNB3Q8WWL7 1395 aa22■■□□□ 1.11
ZEB1-218ENST00000560196 CDK13Q14004 1512 aaKnown RBP22■■□□□ 1.11
ZEB1-218ENST00000560196 MAGI3Q5TCQ9 1506 aa21.99■■□□□ 1.11
ZEB1-218ENST00000560196 ARHGEF11O15085 1522 aa21.98■■□□□ 1.11
ZEB1-218ENST00000560196 SUPT6HQ7KZ85 1726 aaKnown RBP21.97■■□□□ 1.11
ZEB1-218ENST00000560196 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.95■■□□□ 1.1
ZEB1-218ENST00000560196 NCOA2Q15596 1464 aa21.95■■□□□ 1.1
ZEB1-218ENST00000560196 CDK11AQ9UQ88 783 aaPredicted RBP21.94■■□□□ 1.1
ZEB1-218ENST00000560196 ERCC6L2Q5T890 1561 aa21.94■■□□□ 1.1
ZEB1-218ENST00000560196 UACAQ9BZF9 1416 aa21.92■■□□□ 1.1
ZEB1-218ENST00000560196 OSCARQ8IYS5 282 aa21.92■■□□□ 1.1
ZEB1-218ENST00000560196 HRCP23327 699 aa21.91■■□□□ 1.1
ZEB1-218ENST00000560196 MYOM3Q5VTT5 1437 aa21.89■■□□□ 1.1
ZEB1-218ENST00000560196 ATP10BO94823 1461 aa21.89■■□□□ 1.09
ZEB1-218ENST00000560196 TROQ12816 1431 aaPredicted RBP21.89■■□□□ 1.09
ZEB1-218ENST00000560196 FGD6Q6ZV73 1430 aa21.88■■□□□ 1.09
ZEB1-218ENST00000560196 ABCC2Q92887 1545 aa21.85■■□□□ 1.09
ZEB1-218ENST00000560196 UHRF1BP1LA0JNW5 1464 aa21.85■■□□□ 1.09
ZEB1-218ENST00000560196 HNRNPUL2Q1KMD3 747 aaKnown RBP21.85■■□□□ 1.09
ZEB1-218ENST00000560196 ADCY10Q96PN6 1610 aa21.83■■□□□ 1.08
ZEB1-218ENST00000560196 ARID3CA6NKF2 412 aa21.82■■□□□ 1.08
ZEB1-218ENST00000560196 MIA2Q96PC5 1412 aa21.81■■□□□ 1.08
ZEB1-218ENST00000560196 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.81■■□□□ 1.08
ZEB1-218ENST00000560196 TCOF1Q13428 1488 aaKnown RBP21.79■■□□□ 1.08
ZEB1-218ENST00000560196 PLEKHD1A6NEE1 506 aa21.78■■□□□ 1.08
ZEB1-218ENST00000560196 ZEB1P37275 1124 aaPredicted RBP21.75■■□□□ 1.07
ZEB1-218ENST00000560196 FAM50AQ14320 339 aaKnown RBP21.75■■□□□ 1.07
ZEB1-218ENST00000560196 PTPN23Q9H3S7 1636 aa21.75■■□□□ 1.07
ZEB1-218ENST00000560196 KDM5BQ9UGL1 1544 aa21.73■■□□□ 1.07
ZEB1-218ENST00000560196 KIF14Q15058 1648 aa21.71■■□□□ 1.07
ZEB1-218ENST00000560196 ABCC10Q5T3U5 1492 aa21.7■■□□□ 1.06
ZEB1-218ENST00000560196 ITSN2Q9NZM3 1697 aa21.68■■□□□ 1.06
ZEB1-218ENST00000560196 GPATCH8Q9UKJ3 1502 aaKnown RBP21.67■■□□□ 1.06
ZEB1-218ENST00000560196 ZCCHC11Q5TAX3 1644 aaKnown RBP21.66■■□□□ 1.06
ZEB1-218ENST00000560196 CCER1Q8TC90 406 aaPredicted RBP21.65■■□□□ 1.06
ZEB1-218ENST00000560196 ITGAEP38570 1179 aa21.63■■□□□ 1.05
ZEB1-218ENST00000560196 SETD5Q9C0A6 1442 aa21.62■■□□□ 1.05
ZEB1-218ENST00000560196 PTPRKQ15262 1439 aa21.59■■□□□ 1.05
ZEB1-218ENST00000560196 CFDP1Q9UEE9 299 aaPredicted RBP21.58■■□□□ 1.05
ZEB1-218ENST00000560196 CDC42BPAQ5VT25 1732 aa21.58■■□□□ 1.04
ZEB1-218ENST00000560196 AKNAQ7Z591 1439 aa21.57■■□□□ 1.04
ZEB1-218ENST00000560196 HFM1A2PYH4 1435 aa21.55■■□□□ 1.04
ZEB1-218ENST00000560196 RAB3GAP2Q9H2M9 1393 aa21.55■■□□□ 1.04
ZEB1-218ENST00000560196 CAMSAP2Q08AD1 1489 aa21.55■■□□□ 1.04
ZEB1-218ENST00000560196 DNMT1P26358 1616 aaKnown RBP21.55■■□□□ 1.04
ZEB1-218ENST00000560196 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.54■■□□□ 1.04
ZEB1-218ENST00000560196 DAPK1P53355 1430 aa21.53■■□□□ 1.04
ZEB1-218ENST00000560196 CLSPNQ9HAW4 1339 aa21.53■■□□□ 1.04
ZEB1-218ENST00000560196 PREX2Q70Z35 1606 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms