RNA–Protein interactions for RNA: ENST00000560046.1

DCAF11-227, Transcript of DDB1 and CUL4 associated factor 11, humanhuman

TSL 3

Gene DCAF11, Length 686 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF11-227ENST00000560046 PPARGC1BQ86YN6 1023 aaKnown RBP16.47■□□□□ 0.23
DCAF11-227ENST00000560046 RAD54L2Q9Y4B4 1467 aa16.46■□□□□ 0.23
DCAF11-227ENST00000560046 CARMIL1Q5VZK9 1371 aa16.45■□□□□ 0.22
DCAF11-227ENST00000560046 CUL7Q14999 1698 aa16.45■□□□□ 0.22
DCAF11-227ENST00000560046 AQRO60306 1485 aaKnown RBP eCLIP16.43■□□□□ 0.223e-6■■■■□ 24.7
DCAF11-227ENST00000560046 ABCA5Q8WWZ7 1642 aa16.41■□□□□ 0.22
DCAF11-227ENST00000560046 ZEB1P37275 1124 aaPredicted RBP16.4■□□□□ 0.22
DCAF11-227ENST00000560046 ARHGAP35Q9NRY4 1499 aa16.38■□□□□ 0.21
DCAF11-227ENST00000560046 TARBP1Q13395 1621 aaKnown RBP16.37■□□□□ 0.21
DCAF11-227ENST00000560046 GAPVD1Q14C86 1478 aa16.35■□□□□ 0.21
DCAF11-227ENST00000560046 CTTNBP2Q8WZ74 1663 aa16.34■□□□□ 0.21
DCAF11-227ENST00000560046 KDM4FA0A1W2PPD8 638 aa16.31■□□□□ 0.2
DCAF11-227ENST00000560046 APLP2Q06481 763 aa16.29■□□□□ 0.2
DCAF11-227ENST00000560046 RANGAP1P46060 587 aaPredicted RBP16.27■□□□□ 0.2
DCAF11-227ENST00000560046 MAP3K1Q13233 1512 aa16.27■□□□□ 0.2
DCAF11-227ENST00000560046 PBRM1Q86U86 1689 aa16.27■□□□□ 0.19
DCAF11-227ENST00000560046 KIF13AQ9H1H9 1805 aa16.26■□□□□ 0.19
DCAF11-227ENST00000560046 EFCAB5A4FU69 1503 aa16.26■□□□□ 0.19
DCAF11-227ENST00000560046 SNAPC4Q5SXM2 1469 aa16.26■□□□□ 0.19
DCAF11-227ENST00000560046 CHMP7Q8WUX9 453 aaPredicted RBP16.24■□□□□ 0.19
DCAF11-227ENST00000560046 TDRD9Q8NDG6 1382 aaKnown RBP16.24■□□□□ 0.19
DCAF11-227ENST00000560046 TTBK1Q5TCY1 1321 aaPredicted RBP16.23■□□□□ 0.19
DCAF11-227ENST00000560046 MAGI1Q96QZ7 1491 aaPredicted RBP16.21■□□□□ 0.19
DCAF11-227ENST00000560046 TIAM1Q13009 1591 aa16.19■□□□□ 0.18
DCAF11-227ENST00000560046 FHAD1B1AJZ9 1412 aa16.19■□□□□ 0.18
DCAF11-227ENST00000560046 CFAP43Q8NDM7 1665 aa16.18■□□□□ 0.18
DCAF11-227ENST00000560046 ERCC6L2Q5T890 1561 aa16.18■□□□□ 0.18
DCAF11-227ENST00000560046 SAMD9Q5K651 1589 aa16.17■□□□□ 0.18
DCAF11-227ENST00000560046 ADAMTS12P58397 1594 aa16.17■□□□□ 0.18
DCAF11-227ENST00000560046 SYNJ2O15056 1496 aa16.16■□□□□ 0.18
DCAF11-227ENST00000560046 PCF11O94913 1555 aaKnown RBP16.14■□□□□ 0.17
DCAF11-227ENST00000560046 RRBP1Q9P2E9 1410 aaKnown RBP16.13■□□□□ 0.17
DCAF11-227ENST00000560046 KANK4Q5T7N3 995 aaPredicted RBP16.13■□□□□ 0.17
DCAF11-227ENST00000560046 GRIN2BQ13224 1484 aa16.12■□□□□ 0.17
DCAF11-227ENST00000560046 FYCO1Q9BQS8 1478 aa16.12■□□□□ 0.17
DCAF11-227ENST00000560046 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.12■□□□□ 0.17
DCAF11-227ENST00000560046 CCER1Q8TC90 406 aaPredicted RBP16.1■□□□□ 0.17
DCAF11-227ENST00000560046 FHOD3Q2V2M9 1422 aa16.1■□□□□ 0.17
DCAF11-227ENST00000560046 CASKIN1Q8WXD9 1431 aa16.1■□□□□ 0.17
DCAF11-227ENST00000560046 HECW2Q9P2P5 1572 aa16.09■□□□□ 0.17
DCAF11-227ENST00000560046 KDM6BO15054 1643 aa16.09■□□□□ 0.17
DCAF11-227ENST00000560046 FBXO41Q8TF61 875 aa16.09■□□□□ 0.17
DCAF11-227ENST00000560046 LRRC9Q6ZRR7 1453 aa16.08■□□□□ 0.16
DCAF11-227ENST00000560046 FMN1Q68DA7 1419 aa16.06■□□□□ 0.16
DCAF11-227ENST00000560046 IQGAP2Q13576 1575 aa16.04■□□□□ 0.16
DCAF11-227ENST00000560046 ABCC10Q5T3U5 1492 aa16.03■□□□□ 0.16
DCAF11-227ENST00000560046 FAM69CQ0P6D2 419 aa16.01■□□□□ 0.15
DCAF11-227ENST00000560046 HNRNPUL2Q1KMD3 747 aaKnown RBP16.01■□□□□ 0.15
DCAF11-227ENST00000560046 LRRIQ1Q96JM4 1722 aa16.01■□□□□ 0.15
DCAF11-227ENST00000560046 CEP170Q5SW79 1584 aa16■□□□□ 0.15
DCAF11-227ENST00000560046 CCNB3Q8WWL7 1395 aa16■□□□□ 0.15
DCAF11-227ENST00000560046 ADGRL1O94910 1474 aa15.99■□□□□ 0.15
DCAF11-227ENST00000560046 P3H3Q8IVL6 736 aa15.99■□□□□ 0.15
DCAF11-227ENST00000560046 UGGT2Q9NYU1 1516 aa15.99■□□□□ 0.15
DCAF11-227ENST00000560046 DIP2BQ9P265 1576 aa15.98■□□□□ 0.15
DCAF11-227ENST00000560046 LMTK3Q96Q04 1460 aa15.97■□□□□ 0.15
DCAF11-227ENST00000560046 MAPKBP1O60336 1514 aa15.94■□□□□ 0.14
DCAF11-227ENST00000560046 SHROOM2Q13796 1616 aa15.94■□□□□ 0.14
DCAF11-227ENST00000560046 KIAA0586Q9BVV6 1533 aa15.94■□□□□ 0.14
DCAF11-227ENST00000560046 GRIN2AQ12879 1464 aa15.93■□□□□ 0.14
DCAF11-227ENST00000560046 PHLDB1Q86UU1 1377 aa15.92■□□□□ 0.14
DCAF11-227ENST00000560046 HECW1Q76N89 1606 aa15.9■□□□□ 0.14
DCAF11-227ENST00000560046 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.9■□□□□ 0.14
DCAF11-227ENST00000560046 CCDC18Q5T9S5 1454 aa15.89■□□□□ 0.13
DCAF11-227ENST00000560046 NUP160Q12769 1436 aa15.88■□□□□ 0.13
DCAF11-227ENST00000560046 KIAA0556O60303 1618 aa15.88■□□□□ 0.13
DCAF11-227ENST00000560046 CLSPNQ9HAW4 1339 aa15.88■□□□□ 0.13
DCAF11-227ENST00000560046 EHBP1L1Q8N3D4 1523 aa15.88■□□□□ 0.13
DCAF11-227ENST00000560046 TSPOAP1O95153 1857 aa15.87■□□□□ 0.13
DCAF11-227ENST00000560046 SUPT6HQ7KZ85 1726 aaKnown RBP15.87■□□□□ 0.13
DCAF11-227ENST00000560046 SOCS7O14512 581 aa15.86■□□□□ 0.13
DCAF11-227ENST00000560046 DISP1Q96F81 1524 aa15.85■□□□□ 0.13
DCAF11-227ENST00000560046 DHX57Q6P158 1386 aaKnown RBP15.85■□□□□ 0.13
DCAF11-227ENST00000560046 NPM1P06748 294 aaKnown RBP eCLIP15.84■□□□□ 0.13
DCAF11-227ENST00000560046 ATP1B4Q9UN42 357 aaPredicted RBP15.83■□□□□ 0.12
DCAF11-227ENST00000560046 MTUS2Q5JR59 1369 aa15.81■□□□□ 0.12
DCAF11-227ENST00000560046 FGD6Q6ZV73 1430 aa15.81■□□□□ 0.12
DCAF11-227ENST00000560046 EPRSP07814 1512 aaKnown RBP15.8■□□□□ 0.12
DCAF11-227ENST00000560046 MAGI3Q5TCQ9 1506 aa15.8■□□□□ 0.12
DCAF11-227ENST00000560046 NCOA2Q15596 1464 aa15.8■□□□□ 0.12
DCAF11-227ENST00000560046 MYOM3Q5VTT5 1437 aa15.77■□□□□ 0.12
DCAF11-227ENST00000560046 PRG4Q92954 1404 aaPredicted RBP15.77■□□□□ 0.12
DCAF11-227ENST00000560046 SETD5Q9C0A6 1442 aa15.77■□□□□ 0.12
DCAF11-227ENST00000560046 RAPGEF6Q8TEU7 1601 aa15.77■□□□□ 0.12
DCAF11-227ENST00000560046 ADCY10Q96PN6 1610 aa15.76■□□□□ 0.11
DCAF11-227ENST00000560046 RAB3GAP2Q9H2M9 1393 aa15.75■□□□□ 0.11
DCAF11-227ENST00000560046 CDK13Q14004 1512 aaKnown RBP15.73■□□□□ 0.11
DCAF11-227ENST00000560046 TCOF1Q13428 1488 aaKnown RBP15.73■□□□□ 0.11
DCAF11-227ENST00000560046 PTPN23Q9H3S7 1636 aa15.73■□□□□ 0.11
DCAF11-227ENST00000560046 ILDR2Q71H61 639 aa15.73■□□□□ 0.11
DCAF11-227ENST00000560046 FAM50AQ14320 339 aaKnown RBP15.72■□□□□ 0.11
DCAF11-227ENST00000560046 NUP153P49790 1475 aaKnown RBP15.71■□□□□ 0.1
DCAF11-227ENST00000560046 ITGAEP38570 1179 aa15.69■□□□□ 0.1
DCAF11-227ENST00000560046 CARMIL2Q6F5E8 1435 aa15.68■□□□□ 0.1
DCAF11-227ENST00000560046 PPRC1Q5VV67 1664 aaKnown RBP15.68■□□□□ 0.1
DCAF11-227ENST00000560046 MIA2Q96PC5 1412 aa15.67■□□□□ 0.1
DCAF11-227ENST00000560046 DISP3Q9P2K9 1392 aa15.66■□□□□ 0.1
DCAF11-227ENST00000560046 JPH4Q96JJ6 628 aa15.66■□□□□ 0.1
DCAF11-227ENST00000560046 ZNF316A6NFI3 1004 aaPredicted RBP15.65■□□□□ 0.1
DCAF11-227ENST00000560046 HFM1A2PYH4 1435 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms