RNA–Protein interactions for RNA: ENST00000560046.1

DCAF11-227, Transcript of DDB1 and CUL4 associated factor 11, humanhuman

TSL 3

Gene DCAF11, Length 686 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF11-227ENST00000560046 NISCHQ9Y2I1 1504 aa23.43■■□□□ 1.34
DCAF11-227ENST00000560046 ABCC9O60706 1549 aa20.86■□□□□ 0.93
DCAF11-227ENST00000560046 DNAJC5BQ9UF47 199 aa20.4■□□□□ 0.86
DCAF11-227ENST00000560046 CCDC180Q9P1Z9 1646 aa20.36■□□□□ 0.85
DCAF11-227ENST00000560046 ZCCHC6Q5VYS8 1495 aaKnown RBP19.77■□□□□ 0.76
DCAF11-227ENST00000560046 DNAJC5Q9H3Z4 198 aa19.5■□□□□ 0.71
DCAF11-227ENST00000560046 RB1CC1Q8TDY2 1594 aa19.49■□□□□ 0.71
DCAF11-227ENST00000560046 DCAF1Q9Y4B6 1507 aa19.44■□□□□ 0.7
DCAF11-227ENST00000560046 PABPN1Q86U42 306 aaKnown RBP eCLIP19.23■□□□□ 0.67
DCAF11-227ENST00000560046 SHROOM4Q9ULL8 1493 aa19.21■□□□□ 0.67
DCAF11-227ENST00000560046 NACADO15069 1562 aa19.12■□□□□ 0.65
DCAF11-227ENST00000560046 MYO15BQ96JP2 1530 aa19.08■□□□□ 0.64
DCAF11-227ENST00000560046 DCAF8L2P0C7V8 631 aa19.04■□□□□ 0.64
DCAF11-227ENST00000560046 UNC13AQ9UPW8 1703 aa19.03■□□□□ 0.64
DCAF11-227ENST00000560046 BICRAQ9NZM4 1560 aa18.94■□□□□ 0.62
DCAF11-227ENST00000560046 CECR2Q9BXF3 1484 aa18.92■□□□□ 0.62
DCAF11-227ENST00000560046 CC2D2AQ9P2K1 1620 aa18.83■□□□□ 0.61
DCAF11-227ENST00000560046 SCRIBQ14160 1630 aa18.67■□□□□ 0.58
DCAF11-227ENST00000560046 SUPT5HO00267 1087 aaKnown RBP18.64■□□□□ 0.57
DCAF11-227ENST00000560046 EIF4G1Q04637 1599 aaKnown RBP18.56■□□□□ 0.56
DCAF11-227ENST00000560046 CUX2O14529 1486 aa18.46■□□□□ 0.54
DCAF11-227ENST00000560046 RSF1Q96T23 1441 aaPredicted RBP18.29■□□□□ 0.52
DCAF11-227ENST00000560046 TRIM41Q8WV44 630 aa18.19■□□□□ 0.5
DCAF11-227ENST00000560046 CHIC1Q5VXU3 224 aa18.11■□□□□ 0.49
DCAF11-227ENST00000560046 ERCC6Q03468 1493 aa18.11■□□□□ 0.49
DCAF11-227ENST00000560046 MROH2BQ7Z745 1585 aa18.11■□□□□ 0.49
DCAF11-227ENST00000560046 BAZ1AQ9NRL2 1556 aaPredicted RBP18.07■□□□□ 0.48
DCAF11-227ENST00000560046 WIZO95785 1651 aa17.99■□□□□ 0.47
DCAF11-227ENST00000560046 SMARCA4P51532 1647 aa17.97■□□□□ 0.47
DCAF11-227ENST00000560046 TOP2AP11388 1531 aaKnown RBP17.82■□□□□ 0.44
DCAF11-227ENST00000560046 PEG3Q9GZU2 1588 aa17.76■□□□□ 0.43
DCAF11-227ENST00000560046 THOC2Q8NI27 1593 aaKnown RBP17.72■□□□□ 0.43
DCAF11-227ENST00000560046 SMARCA2P51531 1590 aa17.67■□□□□ 0.42
DCAF11-227ENST00000560046 NCAPD3P42695 1498 aa17.65■□□□□ 0.42
DCAF11-227ENST00000560046 NESP48681 1621 aa17.64■□□□□ 0.41
DCAF11-227ENST00000560046 CCDC88BA6NC98 1476 aa17.62■□□□□ 0.41
DCAF11-227ENST00000560046 ATAD2BQ9ULI0 1458 aa17.55■□□□□ 0.4
DCAF11-227ENST00000560046 HMGXB3Q12766 1538 aa17.46■□□□□ 0.39
DCAF11-227ENST00000560046 BAZ1BQ9UIG0 1483 aaKnown RBP17.44■□□□□ 0.38
DCAF11-227ENST00000560046 LAMC3Q9Y6N6 1575 aa17.43■□□□□ 0.38
DCAF11-227ENST00000560046 KIF21AQ7Z4S6 1674 aa17.42■□□□□ 0.38
DCAF11-227ENST00000560046 OSCARQ8IYS5 282 aa17.39■□□□□ 0.37
DCAF11-227ENST00000560046 AEBP2Q6ZN18 517 aaPredicted RBP17.38■□□□□ 0.37
DCAF11-227ENST00000560046 LOC105371045A0A1W2PR82 267 aa17.37■□□□□ 0.37
DCAF11-227ENST00000560046 PDS5BQ9NTI5 1447 aa17.34■□□□□ 0.37
DCAF11-227ENST00000560046 ABCC8Q09428 1581 aa17.33■□□□□ 0.37
DCAF11-227ENST00000560046 RIMBP3CA6NJZ7 1639 aa17.3■□□□□ 0.36
DCAF11-227ENST00000560046 RIMBP3BA6NNM3 1639 aa17.3■□□□□ 0.36
DCAF11-227ENST00000560046 RIMBP3Q9UFD9 1639 aa17.3■□□□□ 0.36
DCAF11-227ENST00000560046 WDR62O43379 1518 aa17.26■□□□□ 0.35
DCAF11-227ENST00000560046 MRC2Q9UBG0 1479 aa17.25■□□□□ 0.35
DCAF11-227ENST00000560046 WRNQ14191 1432 aaPredicted RBP eCLIP17.18■□□□□ 0.34
DCAF11-227ENST00000560046 FAM9AQ8IZU1 332 aaPredicted RBP17.17■□□□□ 0.34
DCAF11-227ENST00000560046 EEA1Q15075 1411 aa17.15■□□□□ 0.34
DCAF11-227ENST00000560046 TRHP20396 242 aaPredicted RBP17.14■□□□□ 0.33
DCAF11-227ENST00000560046 ARHGEF11O15085 1522 aa17.14■□□□□ 0.33
DCAF11-227ENST00000560046 SYNJ1O43426 1573 aa17.14■□□□□ 0.33
DCAF11-227ENST00000560046 PRDM2Q13029 1718 aa17.12■□□□□ 0.33
DCAF11-227ENST00000560046 BIVM-ERCC5R4GMW8 1640 aa17.08■□□□□ 0.32
DCAF11-227ENST00000560046 TOP2BQ02880 1626 aa17.07■□□□□ 0.32
DCAF11-227ENST00000560046 SOGA1O94964 1423 aa17.06■□□□□ 0.32
DCAF11-227ENST00000560046 CFTRP13569 1480 aa17.05■□□□□ 0.32
DCAF11-227ENST00000560046 CADPSQ9ULU8 1353 aa17.04■□□□□ 0.32
DCAF11-227ENST00000560046 CYB5RLQ6IPT4 315 aa17.01■□□□□ 0.31
DCAF11-227ENST00000560046 RUSC2Q8N2Y8 1516 aa17■□□□□ 0.31
DCAF11-227ENST00000560046 CEP164Q9UPV0 1460 aa16.99■□□□□ 0.31
DCAF11-227ENST00000560046 CSRNP3Q8WYN3 585 aa16.96■□□□□ 0.31
DCAF11-227ENST00000560046 KIF21BO75037 1637 aa16.96■□□□□ 0.3
DCAF11-227ENST00000560046 TNIKQ9UKE5 1360 aa16.93■□□□□ 0.3
DCAF11-227ENST00000560046 CUX1P39880 1505 aa16.92■□□□□ 0.3
DCAF11-227ENST00000560046 GOLGA3Q08378 1498 aa16.91■□□□□ 0.3
DCAF11-227ENST00000560046 PCGF6Q9BYE7 350 aa16.9■□□□□ 0.3
DCAF11-227ENST00000560046 ARAP1Q96P48 1450 aa16.9■□□□□ 0.3
DCAF11-227ENST00000560046 TRIM26Q12899 539 aaPredicted RBP16.88■□□□□ 0.29
DCAF11-227ENST00000560046 FANCD2Q9BXW9 1451 aa16.86■□□□□ 0.29
DCAF11-227ENST00000560046 EHMT2Q96KQ7 1210 aa16.86■□□□□ 0.29
DCAF11-227ENST00000560046 CEP162Q5TB80 1403 aa16.83■□□□□ 0.28
DCAF11-227ENST00000560046 ILDR1Q86SU0 546 aaPredicted RBP16.81■□□□□ 0.28
DCAF11-227ENST00000560046 URB2Q14146 1524 aaKnown RBP16.78■□□□□ 0.28
DCAF11-227ENST00000560046 ERICH3Q5RHP9 1530 aa16.76■□□□□ 0.27
DCAF11-227ENST00000560046 HRCP23327 699 aa16.76■□□□□ 0.27
DCAF11-227ENST00000560046 PRXQ9BXM0 1461 aa16.73■□□□□ 0.27
DCAF11-227ENST00000560046 ZNF608Q9ULD9 1512 aaPredicted RBP16.72■□□□□ 0.27
DCAF11-227ENST00000560046 KIF27Q86VH2 1401 aa16.71■□□□□ 0.27
DCAF11-227ENST00000560046 UBTFP17480 764 aaKnown RBP16.71■□□□□ 0.27
DCAF11-227ENST00000560046 RAPGEF2Q9Y4G8 1499 aa16.71■□□□□ 0.27
DCAF11-227ENST00000560046 IFT140Q96RY7 1462 aa16.69■□□□□ 0.26
DCAF11-227ENST00000560046 DNMBPQ6XZF7 1577 aa16.68■□□□□ 0.26
DCAF11-227ENST00000560046 CHD1O14646 1710 aa16.67■□□□□ 0.26
DCAF11-227ENST00000560046 FGD5Q6ZNL6 1462 aa16.66■□□□□ 0.26
DCAF11-227ENST00000560046 CLIP1P30622 1438 aa16.62■□□□□ 0.25
DCAF11-227ENST00000560046 EIF4G3O43432 1585 aaKnown RBP16.62■□□□□ 0.25
DCAF11-227ENST00000560046 TOPBP1Q92547 1522 aa16.6■□□□□ 0.25
DCAF11-227ENST00000560046 VPS8Q8N3P4 1428 aa16.55■□□□□ 0.24
DCAF11-227ENST00000560046 ABCA10Q8WWZ4 1543 aa16.55■□□□□ 0.24
DCAF11-227ENST00000560046 IGF1RP08069 1367 aa16.54■□□□□ 0.24
DCAF11-227ENST00000560046 WDR97A6NE52 1622 aa16.54■□□□□ 0.24
DCAF11-227ENST00000560046 POLA1P09884 1462 aaPredicted RBP16.53■□□□□ 0.24
DCAF11-227ENST00000560046 FBLN2P98095 1184 aa16.49■□□□□ 0.23
DCAF11-227ENST00000560046 CLASP1Q7Z460 1538 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms