RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 CUL7Q14999 1698 aa23.95■■□□□ 1.42
SLIRP-207ENST00000556831 SHROOM2Q13796 1616 aa23.95■■□□□ 1.42
SLIRP-207ENST00000556831 CARMIL1Q5VZK9 1371 aa23.87■■□□□ 1.41
SLIRP-207ENST00000556831 PRG4Q92954 1404 aaPredicted RBP23.81■■□□□ 1.4
SLIRP-207ENST00000556831 JPH4Q96JJ6 628 aa23.79■■□□□ 1.4
SLIRP-207ENST00000556831 KIAA0586Q9BVV6 1533 aa23.76■■□□□ 1.39
SLIRP-207ENST00000556831 RAPGEF2Q9Y4G8 1499 aa23.7■■□□□ 1.38
SLIRP-207ENST00000556831 IQGAP2Q13576 1575 aa23.64■■□□□ 1.37
SLIRP-207ENST00000556831 PRXQ9BXM0 1461 aa23.62■■□□□ 1.37
SLIRP-207ENST00000556831 CHIC1Q5VXU3 224 aa23.57■■□□□ 1.36
SLIRP-207ENST00000556831 EEA1Q15075 1411 aa23.56■■□□□ 1.36
SLIRP-207ENST00000556831 DISP1Q96F81 1524 aa23.55■■□□□ 1.36
SLIRP-207ENST00000556831 CTTNBP2Q8WZ74 1663 aa23.55■■□□□ 1.36
SLIRP-207ENST00000556831 KDM4FA0A1W2PPD8 638 aa23.54■■□□□ 1.36
SLIRP-207ENST00000556831 ADCY10Q96PN6 1610 aa23.54■■□□□ 1.36
SLIRP-207ENST00000556831 TTBK1Q5TCY1 1321 aaPredicted RBP23.54■■□□□ 1.36
SLIRP-207ENST00000556831 FAM9AQ8IZU1 332 aaPredicted RBP23.52■■□□□ 1.36
SLIRP-207ENST00000556831 UGGT2Q9NYU1 1516 aa23.5■■□□□ 1.35
SLIRP-207ENST00000556831 CSRNP3Q8WYN3 585 aa23.49■■□□□ 1.35
SLIRP-207ENST00000556831 CARMIL2Q6F5E8 1435 aa23.47■■□□□ 1.35
SLIRP-207ENST00000556831 KIAA0556O60303 1618 aa23.46■■□□□ 1.35
SLIRP-207ENST00000556831 PTPRGP23470 1445 aa23.44■■□□□ 1.34
SLIRP-207ENST00000556831 FBXO41Q8TF61 875 aa23.44■■□□□ 1.34
SLIRP-207ENST00000556831 TNIKQ9UKE5 1360 aa23.43■■□□□ 1.34
SLIRP-207ENST00000556831 KIF13AQ9H1H9 1805 aa23.38■■□□□ 1.33
SLIRP-207ENST00000556831 LMTK3Q96Q04 1460 aa23.32■■□□□ 1.32
SLIRP-207ENST00000556831 EHMT2Q96KQ7 1210 aa23.32■■□□□ 1.32
SLIRP-207ENST00000556831 MAPKBP1O60336 1514 aa23.32■■□□□ 1.32
SLIRP-207ENST00000556831 GOLGA3Q08378 1498 aa23.31■■□□□ 1.32
SLIRP-207ENST00000556831 KIF21BO75037 1637 aa23.31■■□□□ 1.32
SLIRP-207ENST00000556831 NPM1P06748 294 aaKnown RBP eCLIP23.3■■□□□ 1.32
SLIRP-207ENST00000556831 UACAQ9BZF9 1416 aa23.3■■□□□ 1.32
SLIRP-207ENST00000556831 ABCC2Q92887 1545 aa23.29■■□□□ 1.32
SLIRP-207ENST00000556831 PLB1Q6P1J6 1458 aa23.28■■□□□ 1.32
SLIRP-207ENST00000556831 DIP2BQ9P265 1576 aa23.27■■□□□ 1.32
SLIRP-207ENST00000556831 HECW2Q9P2P5 1572 aa23.27■■□□□ 1.32
SLIRP-207ENST00000556831 P3H3Q8IVL6 736 aa23.27■■□□□ 1.32
SLIRP-207ENST00000556831 UHRF1BP1LA0JNW5 1464 aa23.27■■□□□ 1.32
SLIRP-207ENST00000556831 ABCC10Q5T3U5 1492 aa23.25■■□□□ 1.31
SLIRP-207ENST00000556831 SAMD9Q5K651 1589 aa23.25■■□□□ 1.31
SLIRP-207ENST00000556831 RANGAP1P46060 587 aaPredicted RBP23.24■■□□□ 1.31
SLIRP-207ENST00000556831 ABCA8O94911 1581 aa23.22■■□□□ 1.31
SLIRP-207ENST00000556831 ZCCHC11Q5TAX3 1644 aaKnown RBP23.22■■□□□ 1.31
SLIRP-207ENST00000556831 KDM5BQ9UGL1 1544 aa23.2■■□□□ 1.3
SLIRP-207ENST00000556831 FAM69CQ0P6D2 419 aa23.2■■□□□ 1.3
SLIRP-207ENST00000556831 SOCS7O14512 581 aa23.19■■□□□ 1.3
SLIRP-207ENST00000556831 ASXL2Q76L83 1435 aa23.18■■□□□ 1.3
SLIRP-207ENST00000556831 KDM6BO15054 1643 aa23.18■■□□□ 1.3
SLIRP-207ENST00000556831 FHOD3Q2V2M9 1422 aa23.14■■□□□ 1.29
SLIRP-207ENST00000556831 UBTFP17480 764 aaKnown RBP23.13■■□□□ 1.29
SLIRP-207ENST00000556831 TSPOAP1O95153 1857 aa23.13■■□□□ 1.29
SLIRP-207ENST00000556831 ARID3CA6NKF2 412 aa23.11■■□□□ 1.29
SLIRP-207ENST00000556831 PPRC1Q5VV67 1664 aaKnown RBP23.06■■□□□ 1.28
SLIRP-207ENST00000556831 EPRSP07814 1512 aaKnown RBP23.06■■□□□ 1.28
SLIRP-207ENST00000556831 ADGRL1O94910 1474 aa23.05■■□□□ 1.28
SLIRP-207ENST00000556831 EFCAB5A4FU69 1503 aa23.05■■□□□ 1.28
SLIRP-207ENST00000556831 RAPGEF6Q8TEU7 1601 aa23.04■■□□□ 1.28
SLIRP-207ENST00000556831 GLI2P10070 1586 aa23.03■■□□□ 1.28
SLIRP-207ENST00000556831 ATP10BO94823 1461 aa23.02■■□□□ 1.28
SLIRP-207ENST00000556831 WDR7Q9Y4E6 1490 aa23.01■■□□□ 1.27
SLIRP-207ENST00000556831 ARHGAP35Q9NRY4 1499 aa22.99■■□□□ 1.27
SLIRP-207ENST00000556831 NUP153P49790 1475 aaKnown RBP22.98■■□□□ 1.27
SLIRP-207ENST00000556831 MAP3K4Q9Y6R4 1608 aa22.98■■□□□ 1.27
SLIRP-207ENST00000556831 KCNH8Q96L42 1107 aa22.93■■□□□ 1.26
SLIRP-207ENST00000556831 COL17A1Q9UMD9 1497 aaPredicted RBP22.86■■□□□ 1.25
SLIRP-207ENST00000556831 CDK13Q14004 1512 aaKnown RBP22.86■■□□□ 1.25
SLIRP-207ENST00000556831 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.85■■□□□ 1.25
SLIRP-207ENST00000556831 HNRNPUL2Q1KMD3 747 aaKnown RBP22.85■■□□□ 1.25
SLIRP-207ENST00000556831 ILDR2Q71H61 639 aa22.84■■□□□ 1.25
SLIRP-207ENST00000556831 CFAP43Q8NDM7 1665 aa22.84■■□□□ 1.25
SLIRP-207ENST00000556831 FMN1Q68DA7 1419 aa22.83■■□□□ 1.25
SLIRP-207ENST00000556831 LRRIQ1Q96JM4 1722 aa22.82■■□□□ 1.24
SLIRP-207ENST00000556831 CD109Q6YHK3 1445 aa22.81■■□□□ 1.24
SLIRP-207ENST00000556831 DISP3Q9P2K9 1392 aa22.79■■□□□ 1.24
SLIRP-207ENST00000556831 ABCA9Q8IUA7 1624 aa22.78■■□□□ 1.24
SLIRP-207ENST00000556831 HECW1Q76N89 1606 aa22.76■■□□□ 1.23
SLIRP-207ENST00000556831 ATP1B4Q9UN42 357 aaPredicted RBP22.76■■□□□ 1.23
SLIRP-207ENST00000556831 MAGI3Q5TCQ9 1506 aa22.76■■□□□ 1.23
SLIRP-207ENST00000556831 PCF11O94913 1555 aaKnown RBP22.76■■□□□ 1.23
SLIRP-207ENST00000556831 TEX14Q8IWB6 1497 aa22.74■■□□□ 1.23
SLIRP-207ENST00000556831 CLIP1P30622 1438 aa22.74■■□□□ 1.23
SLIRP-207ENST00000556831 TTC37Q6PGP7 1564 aa22.71■■□□□ 1.23
SLIRP-207ENST00000556831 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.69■■□□□ 1.22
SLIRP-207ENST00000556831 LOC105371045A0A1W2PR82 267 aa22.69■■□□□ 1.22
SLIRP-207ENST00000556831 PLEKHD1A6NEE1 506 aa22.67■■□□□ 1.22
SLIRP-207ENST00000556831 KIF14Q15058 1648 aa22.64■■□□□ 1.22
SLIRP-207ENST00000556831 CASKIN1Q8WXD9 1431 aa22.64■■□□□ 1.21
SLIRP-207ENST00000556831 CDK11AQ9UQ88 783 aaPredicted RBP22.63■■□□□ 1.21
SLIRP-207ENST00000556831 CEP162Q5TB80 1403 aa22.61■■□□□ 1.21
SLIRP-207ENST00000556831 CCDC18Q5T9S5 1454 aa22.59■■□□□ 1.21
SLIRP-207ENST00000556831 FYCO1Q9BQS8 1478 aa22.59■■□□□ 1.21
SLIRP-207ENST00000556831 ARAP3Q8WWN8 1544 aa22.57■■□□□ 1.2
SLIRP-207ENST00000556831 FRMPD1Q5SYB0 1578 aa22.56■■□□□ 1.2
SLIRP-207ENST00000556831 TROQ12816 1431 aaPredicted RBP22.55■■□□□ 1.2
SLIRP-207ENST00000556831 NEO1Q92859 1461 aa22.54■■□□□ 1.2
SLIRP-207ENST00000556831 RAPGEF3O95398 923 aa22.53■■□□□ 1.2
SLIRP-207ENST00000556831 FANCAO15360 1455 aa22.51■■□□□ 1.19
SLIRP-207ENST00000556831 SPATA31D1Q6ZQQ2 1576 aa22.5■■□□□ 1.19
SLIRP-207ENST00000556831 AKNAQ7Z591 1439 aa22.48■■□□□ 1.19
SLIRP-207ENST00000556831 MYO5CQ9NQX4 1742 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms