RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 RUSC2Q8N2Y8 1516 aa38.91■■■■□ 3.82
PABPN1-207ENST00000556821 CARMIL1Q5VZK9 1371 aa38.7■■■■□ 3.79
PABPN1-207ENST00000556821 KIF13AQ9H1H9 1805 aa38.69■■■■□ 3.78
PABPN1-207ENST00000556821 JPH4Q96JJ6 628 aa38.69■■■■□ 3.78
PABPN1-207ENST00000556821 PRG4Q92954 1404 aaPredicted RBP38.69■■■■□ 3.78
PABPN1-207ENST00000556821 FAM69CQ0P6D2 419 aa38.68■■■■□ 3.78
PABPN1-207ENST00000556821 ABCC10Q5T3U5 1492 aa38.66■■■■□ 3.78
PABPN1-207ENST00000556821 KDM4FA0A1W2PPD8 638 aa38.64■■■■□ 3.78
PABPN1-207ENST00000556821 KIAA0586Q9BVV6 1533 aa38.63■■■■□ 3.77
PABPN1-207ENST00000556821 RAPGEF2Q9Y4G8 1499 aa38.5■■■■□ 3.75
PABPN1-207ENST00000556821 NPM1P06748 294 aaKnown RBP eCLIP38.49■■■■□ 3.75
PABPN1-207ENST00000556821 MAPKBP1O60336 1514 aa38.48■■■■□ 3.75
PABPN1-207ENST00000556821 IQGAP2Q13576 1575 aa38.47■■■■□ 3.75
PABPN1-207ENST00000556821 CTTNBP2Q8WZ74 1663 aa38.43■■■■□ 3.74
PABPN1-207ENST00000556821 ILDR1Q86SU0 546 aaPredicted RBP38.42■■■■□ 3.74
PABPN1-207ENST00000556821 DIP2BQ9P265 1576 aa38.38■■■■□ 3.73
PABPN1-207ENST00000556821 PRXQ9BXM0 1461 aa38.35■■■■□ 3.73
PABPN1-207ENST00000556821 ADCY10Q96PN6 1610 aa38.27■■■■□ 3.72
PABPN1-207ENST00000556821 KDM6BO15054 1643 aa38.23■■■■□ 3.71
PABPN1-207ENST00000556821 UGGT2Q9NYU1 1516 aa38.22■■■■□ 3.71
PABPN1-207ENST00000556821 DISP1Q96F81 1524 aa38.18■■■■□ 3.7
PABPN1-207ENST00000556821 EEA1Q15075 1411 aa38.15■■■■□ 3.7
PABPN1-207ENST00000556821 CARMIL2Q6F5E8 1435 aa38.15■■■■□ 3.7
PABPN1-207ENST00000556821 KIAA0556O60303 1618 aa38.14■■■■□ 3.7
PABPN1-207ENST00000556821 CHIC1Q5VXU3 224 aa38.11■■■■□ 3.69
PABPN1-207ENST00000556821 CSRNP3Q8WYN3 585 aa38.09■■■■□ 3.69
PABPN1-207ENST00000556821 TNIKQ9UKE5 1360 aa38.06■■■■□ 3.68
PABPN1-207ENST00000556821 PTPRGP23470 1445 aa38.04■■■■□ 3.68
PABPN1-207ENST00000556821 KIF21BO75037 1637 aa37.97■■■■□ 3.67
PABPN1-207ENST00000556821 TSPOAP1O95153 1857 aa37.92■■■■□ 3.66
PABPN1-207ENST00000556821 TTBK1Q5TCY1 1321 aaPredicted RBP37.9■■■■□ 3.66
PABPN1-207ENST00000556821 FAM9AQ8IZU1 332 aaPredicted RBP37.9■■■■□ 3.66
PABPN1-207ENST00000556821 GOLGA3Q08378 1498 aa37.89■■■■□ 3.66
PABPN1-207ENST00000556821 ADGRL1O94910 1474 aa37.88■■■■□ 3.65
PABPN1-207ENST00000556821 ABCC2Q92887 1545 aa37.87■■■■□ 3.65
PABPN1-207ENST00000556821 UHRF1BP1LA0JNW5 1464 aa37.86■■■■□ 3.65
PABPN1-207ENST00000556821 ASXL2Q76L83 1435 aa37.85■■■■□ 3.65
PABPN1-207ENST00000556821 GLI2P10070 1586 aa37.85■■■■□ 3.65
PABPN1-207ENST00000556821 COL17A1Q9UMD9 1497 aaPredicted RBP37.84■■■■□ 3.65
PABPN1-207ENST00000556821 PLB1Q6P1J6 1458 aa37.84■■■■□ 3.65
PABPN1-207ENST00000556821 UACAQ9BZF9 1416 aa37.82■■■■□ 3.64
PABPN1-207ENST00000556821 SAMD9Q5K651 1589 aa37.81■■■■□ 3.64
PABPN1-207ENST00000556821 PPRC1Q5VV67 1664 aaKnown RBP37.76■■■■□ 3.64
PABPN1-207ENST00000556821 ZCCHC11Q5TAX3 1644 aaKnown RBP37.75■■■■□ 3.63
PABPN1-207ENST00000556821 ABCA8O94911 1581 aa37.72■■■■□ 3.63
PABPN1-207ENST00000556821 KDM5BQ9UGL1 1544 aa37.71■■■■□ 3.63
PABPN1-207ENST00000556821 EPRSP07814 1512 aaKnown RBP37.62■■■■□ 3.61
PABPN1-207ENST00000556821 HECW2Q9P2P5 1572 aa37.62■■■■□ 3.61
PABPN1-207ENST00000556821 P3H3Q8IVL6 736 aa37.53■■■■□ 3.6
PABPN1-207ENST00000556821 TEX14Q8IWB6 1497 aa37.51■■■■□ 3.59
PABPN1-207ENST00000556821 EFCAB5A4FU69 1503 aa37.51■■■■□ 3.59
PABPN1-207ENST00000556821 RAPGEF6Q8TEU7 1601 aa37.49■■■■□ 3.59
PABPN1-207ENST00000556821 MAP3K4Q9Y6R4 1608 aa37.49■■■■□ 3.59
PABPN1-207ENST00000556821 FHOD3Q2V2M9 1422 aa37.44■■■■□ 3.58
PABPN1-207ENST00000556821 RANGAP1P46060 587 aaPredicted RBP37.42■■■■□ 3.58
PABPN1-207ENST00000556821 EHMT2Q96KQ7 1210 aa37.42■■■■□ 3.58
PABPN1-207ENST00000556821 WDR7Q9Y4E6 1490 aa37.39■■■■□ 3.58
PABPN1-207ENST00000556821 UBTFP17480 764 aaKnown RBP37.36■■■■□ 3.57
PABPN1-207ENST00000556821 FBXO41Q8TF61 875 aa37.32■■■■□ 3.56
PABPN1-207ENST00000556821 ATP10BO94823 1461 aa37.31■■■■□ 3.56
PABPN1-207ENST00000556821 NUP153P49790 1475 aaKnown RBP37.27■■■■□ 3.56
PABPN1-207ENST00000556821 ARHGAP35Q9NRY4 1499 aa37.26■■■■□ 3.56
PABPN1-207ENST00000556821 CFAP43Q8NDM7 1665 aa37.26■■■■□ 3.56
PABPN1-207ENST00000556821 MAGI3Q5TCQ9 1506 aa37.25■■■■□ 3.55
PABPN1-207ENST00000556821 CD109Q6YHK3 1445 aa37.21■■■■□ 3.55
PABPN1-207ENST00000556821 ARID3CA6NKF2 412 aa37.2■■■■□ 3.55
PABPN1-207ENST00000556821 KCNH8Q96L42 1107 aa37.09■■■■□ 3.53
PABPN1-207ENST00000556821 ABCA9Q8IUA7 1624 aa37.09■■■■□ 3.53
PABPN1-207ENST00000556821 LRRIQ1Q96JM4 1722 aa37.07■■■■□ 3.53
PABPN1-207ENST00000556821 HECW1Q76N89 1606 aa37.06■■■■□ 3.52
PABPN1-207ENST00000556821 FMN1Q68DA7 1419 aa37.05■■■■□ 3.52
PABPN1-207ENST00000556821 CDK13Q14004 1512 aaKnown RBP37.01■■■■□ 3.52
PABPN1-207ENST00000556821 ARAP3Q8WWN8 1544 aa36.98■■■■□ 3.51
PABPN1-207ENST00000556821 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.95■■■■□ 3.51
PABPN1-207ENST00000556821 HNRNPUL2Q1KMD3 747 aaKnown RBP36.95■■■■□ 3.51
PABPN1-207ENST00000556821 PCF11O94913 1555 aaKnown RBP36.92■■■■□ 3.5
PABPN1-207ENST00000556821 PTPRMP28827 1452 aa36.92■■■■□ 3.5
PABPN1-207ENST00000556821 CLIP1P30622 1438 aa36.86■■■■□ 3.49
PABPN1-207ENST00000556821 PHLDB1Q86UU1 1377 aa36.85■■■■□ 3.49
PABPN1-207ENST00000556821 TTC37Q6PGP7 1564 aa36.83■■■■□ 3.49
PABPN1-207ENST00000556821 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.82■■■■□ 3.482e-21■□□□□ 10
PABPN1-207ENST00000556821 ADAMTSL3P82987 1691 aa36.81■■■■□ 3.48
PABPN1-207ENST00000556821 PLEKHD1A6NEE1 506 aa36.8■■■■□ 3.48
PABPN1-207ENST00000556821 CASKIN1Q8WXD9 1431 aa36.77■■■■□ 3.48
PABPN1-207ENST00000556821 RAPGEF3O95398 923 aa36.76■■■■□ 3.48
PABPN1-207ENST00000556821 ATP1B4Q9UN42 357 aaPredicted RBP36.74■■■■□ 3.47
PABPN1-207ENST00000556821 KIF14Q15058 1648 aa36.73■■■■□ 3.47
PABPN1-207ENST00000556821 FYCO1Q9BQS8 1478 aa36.71■■■■□ 3.47
PABPN1-207ENST00000556821 LMTK3Q96Q04 1460 aa36.69■■■■□ 3.46
PABPN1-207ENST00000556821 MYO5CQ9NQX4 1742 aa36.69■■■■□ 3.46
PABPN1-207ENST00000556821 NEO1Q92859 1461 aa36.69■■■■□ 3.46
PABPN1-207ENST00000556821 CCDC18Q5T9S5 1454 aa36.67■■■■□ 3.46
PABPN1-207ENST00000556821 CFAP74Q9C0B2 1584 aa36.66■■■■□ 3.46
PABPN1-207ENST00000556821 CEP162Q5TB80 1403 aa36.66■■■■□ 3.46
PABPN1-207ENST00000556821 TROQ12816 1431 aaPredicted RBP36.62■■■■□ 3.45
PABPN1-207ENST00000556821 FRMPD1Q5SYB0 1578 aa36.61■■■■□ 3.45
PABPN1-207ENST00000556821 RICTORQ6R327 1708 aa36.58■■■■□ 3.45
PABPN1-207ENST00000556821 FANCAO15360 1455 aa36.56■■■■□ 3.44
PABPN1-207ENST00000556821 CDK11AQ9UQ88 783 aaPredicted RBP36.56■■■■□ 3.44
PABPN1-207ENST00000556821 ARID4BQ4LE39 1312 aaPredicted RBP36.56■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms