RNA–Protein interactions for RNA: ENST00000556577.1

STRN3-208, Transcript of striatin 3, humanhuman

TSL 5

Gene STRN3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-208ENST00000556577 GAPVD1Q14C86 1478 aa12.54□□□□□ -0.4
STRN3-208ENST00000556577 RAPGEF2Q9Y4G8 1499 aa12.54□□□□□ -0.4
STRN3-208ENST00000556577 IGF1RP08069 1367 aa12.54□□□□□ -0.4
STRN3-208ENST00000556577 TDRD9Q8NDG6 1382 aaKnown RBP12.54□□□□□ -0.4
STRN3-208ENST00000556577 TNIKQ9UKE5 1360 aa12.54□□□□□ -0.4
STRN3-208ENST00000556577 CARMIL1Q5VZK9 1371 aa12.51□□□□□ -0.41
STRN3-208ENST00000556577 EIF4G3O43432 1585 aaKnown RBP12.48□□□□□ -0.41
STRN3-208ENST00000556577 CEP162Q5TB80 1403 aa12.48□□□□□ -0.41
STRN3-208ENST00000556577 ZNF608Q9ULD9 1512 aaPredicted RBP12.47□□□□□ -0.41
STRN3-208ENST00000556577 GRIN2BQ13224 1484 aa12.47□□□□□ -0.41
STRN3-208ENST00000556577 AQRO60306 1485 aaKnown RBP eCLIP12.46□□□□□ -0.41
STRN3-208ENST00000556577 ADAMTS12P58397 1594 aa12.44□□□□□ -0.42
STRN3-208ENST00000556577 CTTNBP2Q8WZ74 1663 aa12.42□□□□□ -0.42
STRN3-208ENST00000556577 FHAD1B1AJZ9 1412 aa12.41□□□□□ -0.42
STRN3-208ENST00000556577 CLIP1P30622 1438 aa12.41□□□□□ -0.42
STRN3-208ENST00000556577 SNAPC4Q5SXM2 1469 aa12.39□□□□□ -0.43
STRN3-208ENST00000556577 MAGI1Q96QZ7 1491 aaPredicted RBP12.39□□□□□ -0.43
STRN3-208ENST00000556577 RANGAP1P46060 587 aaPredicted RBP12.35□□□□□ -0.43
STRN3-208ENST00000556577 SYNJ2O15056 1496 aa12.33□□□□□ -0.44
STRN3-208ENST00000556577 GRIN2AQ12879 1464 aa12.31□□□□□ -0.44
STRN3-208ENST00000556577 EFCAB5A4FU69 1503 aa12.3□□□□□ -0.44
STRN3-208ENST00000556577 IQGAP2Q13576 1575 aa12.29□□□□□ -0.44
STRN3-208ENST00000556577 VPS8Q8N3P4 1428 aa12.28□□□□□ -0.44
STRN3-208ENST00000556577 ARHGAP35Q9NRY4 1499 aa12.28□□□□□ -0.44
STRN3-208ENST00000556577 CHMP7Q8WUX9 453 aaPredicted RBP12.28□□□□□ -0.44
STRN3-208ENST00000556577 ARAP1Q96P48 1450 aa12.27□□□□□ -0.44
STRN3-208ENST00000556577 CHD1O14646 1710 aa12.26□□□□□ -0.45
STRN3-208ENST00000556577 FBLN2P98095 1184 aa12.26□□□□□ -0.45
STRN3-208ENST00000556577 SAMD9Q5K651 1589 aa12.23□□□□□ -0.45
STRN3-208ENST00000556577 CEP170Q5SW79 1584 aa12.23□□□□□ -0.45
STRN3-208ENST00000556577 KIAA0586Q9BVV6 1533 aa12.23□□□□□ -0.45
STRN3-208ENST00000556577 NUP160Q12769 1436 aa12.21□□□□□ -0.45
STRN3-208ENST00000556577 ZBTB22O15209 634 aa12.21□□□□□ -0.45
STRN3-208ENST00000556577 APLP2Q06481 763 aa12.2□□□□□ -0.46
STRN3-208ENST00000556577 UGGT2Q9NYU1 1516 aa12.2□□□□□ -0.46
STRN3-208ENST00000556577 FHOD3Q2V2M9 1422 aa12.2□□□□□ -0.46
STRN3-208ENST00000556577 P3H3Q8IVL6 736 aa12.17□□□□□ -0.46
STRN3-208ENST00000556577 FMN1Q68DA7 1419 aa12.17□□□□□ -0.46
STRN3-208ENST00000556577 KIAA0556O60303 1618 aa12.15□□□□□ -0.46
STRN3-208ENST00000556577 PCF11O94913 1555 aaKnown RBP12.15□□□□□ -0.46
STRN3-208ENST00000556577 FYCO1Q9BQS8 1478 aa12.14□□□□□ -0.47
STRN3-208ENST00000556577 PPARGC1BQ86YN6 1023 aaKnown RBP12.12□□□□□ -0.47
STRN3-208ENST00000556577 CARMIL2Q6F5E8 1435 aa12.11□□□□□ -0.47
STRN3-208ENST00000556577 CASKIN1Q8WXD9 1431 aa12.11□□□□□ -0.47
STRN3-208ENST00000556577 DISP1Q96F81 1524 aa12.11□□□□□ -0.47
STRN3-208ENST00000556577 CFAP43Q8NDM7 1665 aa12.11□□□□□ -0.47
STRN3-208ENST00000556577 FOXD4L1Q9NU39 408 aa12.11□□□□□ -0.47
STRN3-208ENST00000556577 SLC4A2P04920 1241 aa12.1□□□□□ -0.47
STRN3-208ENST00000556577 TRIM26Q12899 539 aaPredicted RBP12.1□□□□□ -0.47
STRN3-208ENST00000556577 TIAM1Q13009 1591 aa12.09□□□□□ -0.47
STRN3-208ENST00000556577 JPH4Q96JJ6 628 aa12.09□□□□□ -0.47
STRN3-208ENST00000556577 MAP3K1Q13233 1512 aa12.09□□□□□ -0.47
STRN3-208ENST00000556577 SHROOM2Q13796 1616 aa12.08□□□□□ -0.48
STRN3-208ENST00000556577 HECW1Q76N89 1606 aa12.08□□□□□ -0.48
STRN3-208ENST00000556577 TTBK1Q5TCY1 1321 aaPredicted RBP12.08□□□□□ -0.48
STRN3-208ENST00000556577 CLASP1Q7Z460 1538 aa12.07□□□□□ -0.48
STRN3-208ENST00000556577 ATP1B4Q9UN42 357 aaPredicted RBP12.07□□□□□ -0.48
STRN3-208ENST00000556577 PCGF6Q9BYE7 350 aa12.06□□□□□ -0.48
STRN3-208ENST00000556577 PRG4Q92954 1404 aaPredicted RBP12.05□□□□□ -0.48
STRN3-208ENST00000556577 RAPGEF6Q8TEU7 1601 aa12.04□□□□□ -0.48
STRN3-208ENST00000556577 LRRIQ1Q96JM4 1722 aa12.03□□□□□ -0.48
STRN3-208ENST00000556577 CCDC18Q5T9S5 1454 aa12.03□□□□□ -0.48
STRN3-208ENST00000556577 LRRC9Q6ZRR7 1453 aa12.01□□□□□ -0.49
STRN3-208ENST00000556577 KANK4Q5T7N3 995 aaPredicted RBP11.99□□□□□ -0.49
STRN3-208ENST00000556577 EPRSP07814 1512 aaKnown RBP11.98□□□□□ -0.49
STRN3-208ENST00000556577 EHBP1L1Q8N3D4 1523 aa11.97□□□□□ -0.49
STRN3-208ENST00000556577 PTPRGP23470 1445 aa11.97□□□□□ -0.49
STRN3-208ENST00000556577 ABCA8O94911 1581 aa11.96□□□□□ -0.49
STRN3-208ENST00000556577 MTUS2Q5JR59 1369 aa11.96□□□□□ -0.49
STRN3-208ENST00000556577 OSCARQ8IYS5 282 aa11.96□□□□□ -0.49
STRN3-208ENST00000556577 ERCC6L2Q5T890 1561 aa11.96□□□□□ -0.5
STRN3-208ENST00000556577 CDK13Q14004 1512 aaKnown RBP11.96□□□□□ -0.5
STRN3-208ENST00000556577 NUP153P49790 1475 aaKnown RBP11.95□□□□□ -0.5
STRN3-208ENST00000556577 PLB1Q6P1J6 1458 aa11.95□□□□□ -0.5
STRN3-208ENST00000556577 SUPT6HQ7KZ85 1726 aaKnown RBP11.95□□□□□ -0.5
STRN3-208ENST00000556577 ARID3CA6NKF2 412 aa11.91□□□□□ -0.5
STRN3-208ENST00000556577 CDK11AQ9UQ88 783 aaPredicted RBP11.91□□□□□ -0.5
STRN3-208ENST00000556577 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.9□□□□□ -0.5
STRN3-208ENST00000556577 HNRNPUL2Q1KMD3 747 aaKnown RBP11.9□□□□□ -0.5
STRN3-208ENST00000556577 UACAQ9BZF9 1416 aa11.9□□□□□ -0.5
STRN3-208ENST00000556577 MAGI3Q5TCQ9 1506 aa11.9□□□□□ -0.5
STRN3-208ENST00000556577 ABCC2Q92887 1545 aa11.89□□□□□ -0.51
STRN3-208ENST00000556577 RRBP1Q9P2E9 1410 aaKnown RBP11.88□□□□□ -0.51
STRN3-208ENST00000556577 NCOA2Q15596 1464 aa11.88□□□□□ -0.51
STRN3-208ENST00000556577 PHLDB1Q86UU1 1377 aa11.87□□□□□ -0.51
STRN3-208ENST00000556577 CCNB3Q8WWL7 1395 aa11.86□□□□□ -0.51
STRN3-208ENST00000556577 TROQ12816 1431 aaPredicted RBP11.86□□□□□ -0.51
STRN3-208ENST00000556577 UHRF1BP1LA0JNW5 1464 aa11.85□□□□□ -0.51
STRN3-208ENST00000556577 ATP10BO94823 1461 aa11.85□□□□□ -0.51
STRN3-208ENST00000556577 POTEDQ86YR6 584 aa11.85□□□□□ -0.51
STRN3-208ENST00000556577 ADCY10Q96PN6 1610 aa11.85□□□□□ -0.51
STRN3-208ENST00000556577 ARHGEF11O15085 1522 aa11.85□□□□□ -0.51
STRN3-208ENST00000556577 DCAF8L1A6NGE4 600 aa11.84□□□□□ -0.51
STRN3-208ENST00000556577 MYCNP04198 464 aaPredicted RBP11.84□□□□□ -0.51
STRN3-208ENST00000556577 MYOM3Q5VTT5 1437 aa11.84□□□□□ -0.51
STRN3-208ENST00000556577 KIF14Q15058 1648 aa11.83□□□□□ -0.52
STRN3-208ENST00000556577 FGD6Q6ZV73 1430 aa11.83□□□□□ -0.52
STRN3-208ENST00000556577 ITSN2Q9NZM3 1697 aa11.82□□□□□ -0.52
STRN3-208ENST00000556577 PLEKHD1A6NEE1 506 aa11.82□□□□□ -0.52
STRN3-208ENST00000556577 ZCCHC11Q5TAX3 1644 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms