RNA–Protein interactions for RNA: ENST00000556577.1

STRN3-208, Transcript of striatin 3, humanhuman

TSL 5

Gene STRN3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-208ENST00000556577 AEBP2Q6ZN18 517 aaPredicted RBP18.71■□□□□ 0.59
STRN3-208ENST00000556577 CHIC1Q5VXU3 224 aa18.49■□□□□ 0.55
STRN3-208ENST00000556577 NISCHQ9Y2I1 1504 aa17.84■□□□□ 0.45
STRN3-208ENST00000556577 PHF23Q9BUL5 403 aaPredicted RBP16.28■□□□□ 0.2
STRN3-208ENST00000556577 SENP3Q9H4L4 574 aaPredicted RBP15.82■□□□□ 0.12
STRN3-208ENST00000556577 CCDC180Q9P1Z9 1646 aa15.68■□□□□ 0.1
STRN3-208ENST00000556577 PLPPR3Q6T4P5 718 aa15.07■□□□□ 0
STRN3-208ENST00000556577 ZCCHC6Q5VYS8 1495 aaKnown RBP14.98□□□□□ -0.01
STRN3-208ENST00000556577 ABCC9O60706 1549 aa14.82□□□□□ -0.04
STRN3-208ENST00000556577 DCAF1Q9Y4B6 1507 aa14.77□□□□□ -0.04
STRN3-208ENST00000556577 DCAF8L2P0C7V8 631 aa14.74□□□□□ -0.05
STRN3-208ENST00000556577 FOXD1Q16676 465 aa14.65□□□□□ -0.06
STRN3-208ENST00000556577 MYO15BQ96JP2 1530 aa14.63□□□□□ -0.07
STRN3-208ENST00000556577 NACADO15069 1562 aa14.59□□□□□ -0.07
STRN3-208ENST00000556577 RB1CC1Q8TDY2 1594 aa14.5□□□□□ -0.09
STRN3-208ENST00000556577 SHROOM4Q9ULL8 1493 aa14.48□□□□□ -0.09
STRN3-208ENST00000556577 SCRIBQ14160 1630 aa14.37□□□□□ -0.11
STRN3-208ENST00000556577 PPP6R1Q9UPN7 881 aa14.25□□□□□ -0.13
STRN3-208ENST00000556577 UNC13AQ9UPW8 1703 aa14.2□□□□□ -0.14
STRN3-208ENST00000556577 ADRA2BP18089 450 aa14.18□□□□□ -0.14
STRN3-208ENST00000556577 BICRAQ9NZM4 1560 aa14□□□□□ -0.17
STRN3-208ENST00000556577 PABPN1Q86U42 306 aaKnown RBP eCLIP13.91□□□□□ -0.18
STRN3-208ENST00000556577 SUPT5HO00267 1087 aaKnown RBP13.88□□□□□ -0.19
STRN3-208ENST00000556577 CECR2Q9BXF3 1484 aa13.83□□□□□ -0.2
STRN3-208ENST00000556577 BAZ1AQ9NRL2 1556 aaPredicted RBP13.82□□□□□ -0.2
STRN3-208ENST00000556577 PIAS4Q8N2W9 510 aaPredicted RBP13.78□□□□□ -0.2
STRN3-208ENST00000556577 RSF1Q96T23 1441 aaPredicted RBP13.78□□□□□ -0.2
STRN3-208ENST00000556577 SMARCA4P51532 1647 aa13.77□□□□□ -0.21
STRN3-208ENST00000556577 MROH2BQ7Z745 1585 aa13.77□□□□□ -0.21
STRN3-208ENST00000556577 WIZO95785 1651 aa13.68□□□□□ -0.22
STRN3-208ENST00000556577 EIF4G1Q04637 1599 aaKnown RBP13.61□□□□□ -0.23
STRN3-208ENST00000556577 PEG3Q9GZU2 1588 aa13.58□□□□□ -0.23
STRN3-208ENST00000556577 SMARCA2P51531 1590 aa13.57□□□□□ -0.24
STRN3-208ENST00000556577 TOP2AP11388 1531 aaKnown RBP13.55□□□□□ -0.24
STRN3-208ENST00000556577 ATAD2BQ9ULI0 1458 aa13.52□□□□□ -0.25
STRN3-208ENST00000556577 BAZ1BQ9UIG0 1483 aaKnown RBP13.48□□□□□ -0.25
STRN3-208ENST00000556577 HMGXB3Q12766 1538 aa13.44□□□□□ -0.26
STRN3-208ENST00000556577 CC2D2AQ9P2K1 1620 aa13.43□□□□□ -0.26
STRN3-208ENST00000556577 MSH5O43196 834 aa13.43□□□□□ -0.26
STRN3-208ENST00000556577 NCAPD3P42695 1498 aa13.41□□□□□ -0.26
STRN3-208ENST00000556577 CCDC88BA6NC98 1476 aa13.36□□□□□ -0.27
STRN3-208ENST00000556577 PPP4R3CPQ6ZMV5 832 aa13.26□□□□□ -0.29
STRN3-208ENST00000556577 KCNA4P22459 653 aa13.2□□□□□ -0.3
STRN3-208ENST00000556577 PRDM2Q13029 1718 aa13.14□□□□□ -0.31
STRN3-208ENST00000556577 CFTRP13569 1480 aa13.1□□□□□ -0.31
STRN3-208ENST00000556577 TRIM41Q8WV44 630 aa13.08□□□□□ -0.32
STRN3-208ENST00000556577 ABCC8Q09428 1581 aa13.07□□□□□ -0.32
STRN3-208ENST00000556577 CADPSQ9ULU8 1353 aa13.07□□□□□ -0.32
STRN3-208ENST00000556577 DNAJC5BQ9UF47 199 aa13.04□□□□□ -0.32
STRN3-208ENST00000556577 LAMC3Q9Y6N6 1575 aa13.03□□□□□ -0.32
STRN3-208ENST00000556577 WRNQ14191 1432 aaPredicted RBP eCLIP13.01□□□□□ -0.33
STRN3-208ENST00000556577 SCAF1Q9H7N4 1312 aaKnown RBP12.99□□□□□ -0.33
STRN3-208ENST00000556577 NESP48681 1621 aa12.97□□□□□ -0.33
STRN3-208ENST00000556577 SYNJ1O43426 1573 aa12.96□□□□□ -0.33
STRN3-208ENST00000556577 NCBP3Q53F19 620 aaKnown RBP12.95□□□□□ -0.34
STRN3-208ENST00000556577 FANCD2Q9BXW9 1451 aa12.94□□□□□ -0.34
STRN3-208ENST00000556577 TOP2BQ02880 1626 aa12.94□□□□□ -0.34
STRN3-208ENST00000556577 BIVM-ERCC5R4GMW8 1640 aa12.94□□□□□ -0.34
STRN3-208ENST00000556577 PDS5BQ9NTI5 1447 aa12.91□□□□□ -0.34
STRN3-208ENST00000556577 CEP164Q9UPV0 1460 aa12.9□□□□□ -0.34
STRN3-208ENST00000556577 CUX1P39880 1505 aa12.89□□□□□ -0.35
STRN3-208ENST00000556577 CNKSR2Q8WXI2 1034 aa12.89□□□□□ -0.35
STRN3-208ENST00000556577 KIF21AQ7Z4S6 1674 aa12.88□□□□□ -0.35
STRN3-208ENST00000556577 DNMBPQ6XZF7 1577 aa12.85□□□□□ -0.35
STRN3-208ENST00000556577 NPM3O75607 178 aaKnown RBP12.83□□□□□ -0.36
STRN3-208ENST00000556577 FAM9AQ8IZU1 332 aaPredicted RBP12.82□□□□□ -0.36
STRN3-208ENST00000556577 EEA1Q15075 1411 aa12.81□□□□□ -0.36
STRN3-208ENST00000556577 TOPBP1Q92547 1522 aa12.79□□□□□ -0.36
STRN3-208ENST00000556577 MAPK8IP2Q13387 824 aaPredicted RBP12.79□□□□□ -0.36
STRN3-208ENST00000556577 SOGA1O94964 1423 aa12.78□□□□□ -0.36
STRN3-208ENST00000556577 FGD5Q6ZNL6 1462 aa12.78□□□□□ -0.36
STRN3-208ENST00000556577 ERCC6Q03468 1493 aa12.77□□□□□ -0.37
STRN3-208ENST00000556577 URB2Q14146 1524 aaKnown RBP12.77□□□□□ -0.37
STRN3-208ENST00000556577 MRC2Q9UBG0 1479 aa12.76□□□□□ -0.37
STRN3-208ENST00000556577 RUSC2Q8N2Y8 1516 aa12.72□□□□□ -0.37
STRN3-208ENST00000556577 POLA1P09884 1462 aaPredicted RBP12.72□□□□□ -0.37
STRN3-208ENST00000556577 KIF27Q86VH2 1401 aa12.71□□□□□ -0.38
STRN3-208ENST00000556577 DMRT2Q9Y5R5 561 aa12.7□□□□□ -0.38
STRN3-208ENST00000556577 LOC105371045A0A1W2PR82 267 aa12.69□□□□□ -0.38
STRN3-208ENST00000556577 CSRNP3Q8WYN3 585 aa12.69□□□□□ -0.38
STRN3-208ENST00000556577 WDR62O43379 1518 aa12.68□□□□□ -0.38
STRN3-208ENST00000556577 CUX2O14529 1486 aa12.68□□□□□ -0.38
STRN3-208ENST00000556577 THOC2Q8NI27 1593 aaKnown RBP12.67□□□□□ -0.38
STRN3-208ENST00000556577 WDR97A6NE52 1622 aa12.66□□□□□ -0.38
STRN3-208ENST00000556577 ABCA10Q8WWZ4 1543 aa12.66□□□□□ -0.38
STRN3-208ENST00000556577 KIF21BO75037 1637 aa12.66□□□□□ -0.38
STRN3-208ENST00000556577 RAD54L2Q9Y4B4 1467 aa12.65□□□□□ -0.38
STRN3-208ENST00000556577 EHMT2Q96KQ7 1210 aa12.63□□□□□ -0.39
STRN3-208ENST00000556577 GOLGA3Q08378 1498 aa12.63□□□□□ -0.39
STRN3-208ENST00000556577 RNF216Q9NWF9 866 aaPredicted RBP12.62□□□□□ -0.39
STRN3-208ENST00000556577 TARBP1Q13395 1621 aaKnown RBP12.61□□□□□ -0.39
STRN3-208ENST00000556577 IFT140Q96RY7 1462 aa12.59□□□□□ -0.39
STRN3-208ENST00000556577 ABCA5Q8WWZ7 1642 aa12.59□□□□□ -0.39
STRN3-208ENST00000556577 ERICH3Q5RHP9 1530 aa12.58□□□□□ -0.4
STRN3-208ENST00000556577 HOXD11P31277 338 aaPredicted RBP12.57□□□□□ -0.4
STRN3-208ENST00000556577 SLC4A1APQ9BWU0 796 aaKnown RBP12.56□□□□□ -0.4
STRN3-208ENST00000556577 PRXQ9BXM0 1461 aa12.56□□□□□ -0.4
STRN3-208ENST00000556577 CUL7Q14999 1698 aa12.56□□□□□ -0.4
STRN3-208ENST00000556577 UBTFP17480 764 aaKnown RBP12.55□□□□□ -0.4
STRN3-208ENST00000556577 PBRM1Q86U86 1689 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms