RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 KIAA0586Q9BVV6 1533 aa14.64□□□□□ -0.07
ACTN1-218ENST00000556343 NUP160Q12769 1436 aa14.63□□□□□ -0.07
ACTN1-218ENST00000556343 CEP162Q5TB80 1403 aa14.62□□□□□ -0.07
ACTN1-218ENST00000556343 CLIP1P30622 1438 aa14.61□□□□□ -0.07
ACTN1-218ENST00000556343 JPH4Q96JJ6 628 aa14.6□□□□□ -0.07
ACTN1-218ENST00000556343 IQGAP2Q13576 1575 aa14.56□□□□□ -0.08
ACTN1-218ENST00000556343 CTTNBP2Q8WZ74 1663 aa14.55□□□□□ -0.08
ACTN1-218ENST00000556343 CEP170Q5SW79 1584 aa14.55□□□□□ -0.08
ACTN1-218ENST00000556343 CHD1O14646 1710 aa14.55□□□□□ -0.08
ACTN1-218ENST00000556343 CARMIL2Q6F5E8 1435 aa14.54□□□□□ -0.08
ACTN1-218ENST00000556343 EFCAB5A4FU69 1503 aa14.52□□□□□ -0.08
ACTN1-218ENST00000556343 P3H3Q8IVL6 736 aa14.52□□□□□ -0.09
ACTN1-218ENST00000556343 UGGT2Q9NYU1 1516 aa14.51□□□□□ -0.09
ACTN1-218ENST00000556343 ARHGAP35Q9NRY4 1499 aa14.49□□□□□ -0.09
ACTN1-218ENST00000556343 APLP2Q06481 763 aa14.47□□□□□ -0.09
ACTN1-218ENST00000556343 PRG4Q92954 1404 aaPredicted RBP14.47□□□□□ -0.09
ACTN1-218ENST00000556343 FMN1Q68DA7 1419 aa14.46□□□□□ -0.09
ACTN1-218ENST00000556343 CLASP1Q7Z460 1538 aa14.46□□□□□ -0.1
ACTN1-218ENST00000556343 FHOD3Q2V2M9 1422 aa14.43□□□□□ -0.1
ACTN1-218ENST00000556343 VPS8Q8N3P4 1428 aa14.43□□□□□ -0.1
ACTN1-218ENST00000556343 SAMD9Q5K651 1589 aa14.43□□□□□ -0.1
ACTN1-218ENST00000556343 ARAP1Q96P48 1450 aa14.42□□□□□ -0.1
ACTN1-218ENST00000556343 TTBK1Q5TCY1 1321 aaPredicted RBP14.41□□□□□ -0.1
ACTN1-218ENST00000556343 DISP1Q96F81 1524 aa14.41□□□□□ -0.1
ACTN1-218ENST00000556343 ATP1B4Q9UN42 357 aaPredicted RBP14.41□□□□□ -0.1
ACTN1-218ENST00000556343 PTPRGP23470 1445 aa14.4□□□□□ -0.1
ACTN1-218ENST00000556343 KIAA0556O60303 1618 aa14.39□□□□□ -0.11
ACTN1-218ENST00000556343 SHROOM2Q13796 1616 aa14.38□□□□□ -0.11
ACTN1-218ENST00000556343 CASKIN1Q8WXD9 1431 aa14.34□□□□□ -0.11
ACTN1-218ENST00000556343 FYCO1Q9BQS8 1478 aa14.31□□□□□ -0.12
ACTN1-218ENST00000556343 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.3□□□□□ -0.12
ACTN1-218ENST00000556343 HNRNPUL2Q1KMD3 747 aaKnown RBP14.3□□□□□ -0.12
ACTN1-218ENST00000556343 CDK11AQ9UQ88 783 aaPredicted RBP14.3□□□□□ -0.12
ACTN1-218ENST00000556343 UACAQ9BZF9 1416 aa14.29□□□□□ -0.12
ACTN1-218ENST00000556343 NPM1P06748 294 aaKnown RBP eCLIP14.26□□□□□ -0.13
ACTN1-218ENST00000556343 ERCC6L2Q5T890 1561 aa14.26□□□□□ -0.13
ACTN1-218ENST00000556343 CCDC18Q5T9S5 1454 aa14.25□□□□□ -0.13
ACTN1-218ENST00000556343 MAP3K1Q13233 1512 aa14.25□□□□□ -0.13
ACTN1-218ENST00000556343 HECW1Q76N89 1606 aa14.24□□□□□ -0.13
ACTN1-218ENST00000556343 ARHGEF11O15085 1522 aa14.24□□□□□ -0.13
ACTN1-218ENST00000556343 PLB1Q6P1J6 1458 aa14.24□□□□□ -0.13
ACTN1-218ENST00000556343 RAPGEF6Q8TEU7 1601 aa14.23□□□□□ -0.13
ACTN1-218ENST00000556343 PCF11O94913 1555 aaKnown RBP14.23□□□□□ -0.13
ACTN1-218ENST00000556343 PLEKHD1A6NEE1 506 aa14.22□□□□□ -0.13
ACTN1-218ENST00000556343 UHRF1BP1LA0JNW5 1464 aa14.22□□□□□ -0.13
ACTN1-218ENST00000556343 ABCA8O94911 1581 aa14.22□□□□□ -0.13
ACTN1-218ENST00000556343 CYB5RLQ6IPT4 315 aa14.21□□□□□ -0.13
ACTN1-218ENST00000556343 EPRSP07814 1512 aaKnown RBP14.2□□□□□ -0.14
ACTN1-218ENST00000556343 ARID3CA6NKF2 412 aa14.2□□□□□ -0.14
ACTN1-218ENST00000556343 MTUS2Q5JR59 1369 aa14.2□□□□□ -0.14
ACTN1-218ENST00000556343 NUP153P49790 1475 aaKnown RBP14.19□□□□□ -0.14
ACTN1-218ENST00000556343 ABCC2Q92887 1545 aa14.19□□□□□ -0.14
ACTN1-218ENST00000556343 PPARGC1BQ86YN6 1023 aaKnown RBP14.18□□□□□ -0.14
ACTN1-218ENST00000556343 KANK4Q5T7N3 995 aaPredicted RBP14.16□□□□□ -0.14
ACTN1-218ENST00000556343 ATP10BO94823 1461 aa14.16□□□□□ -0.14
ACTN1-218ENST00000556343 TIAM1Q13009 1591 aa14.16□□□□□ -0.14
ACTN1-218ENST00000556343 RIMBP3CA6NJZ7 1639 aa14.15□□□□□ -0.14
ACTN1-218ENST00000556343 RIMBP3BA6NNM3 1639 aa14.15□□□□□ -0.14
ACTN1-218ENST00000556343 RIMBP3Q9UFD9 1639 aa14.15□□□□□ -0.14
ACTN1-218ENST00000556343 DNAJC5Q9H3Z4 198 aa14.15□□□□□ -0.14
ACTN1-218ENST00000556343 LRRC9Q6ZRR7 1453 aa14.14□□□□□ -0.15
ACTN1-218ENST00000556343 KDM5BQ9UGL1 1544 aa14.12□□□□□ -0.15
ACTN1-218ENST00000556343 CDK13Q14004 1512 aaKnown RBP14.1□□□□□ -0.15
ACTN1-218ENST00000556343 TROQ12816 1431 aaPredicted RBP14.1□□□□□ -0.15
ACTN1-218ENST00000556343 CFAP43Q8NDM7 1665 aa14.09□□□□□ -0.15
ACTN1-218ENST00000556343 EHBP1L1Q8N3D4 1523 aa14.09□□□□□ -0.15
ACTN1-218ENST00000556343 TRIM26Q12899 539 aaPredicted RBP14.08□□□□□ -0.16
ACTN1-218ENST00000556343 KCNH8Q96L42 1107 aa14.07□□□□□ -0.16
ACTN1-218ENST00000556343 ADCY10Q96PN6 1610 aa14.07□□□□□ -0.16
ACTN1-218ENST00000556343 CCNB3Q8WWL7 1395 aa14.04□□□□□ -0.16
ACTN1-218ENST00000556343 ZCCHC11Q5TAX3 1644 aaKnown RBP14.03□□□□□ -0.16
ACTN1-218ENST00000556343 LRRIQ1Q96JM4 1722 aa14.02□□□□□ -0.16
ACTN1-218ENST00000556343 NCOA2Q15596 1464 aa14.02□□□□□ -0.16
ACTN1-218ENST00000556343 ASXL2Q76L83 1435 aa14.02□□□□□ -0.16
ACTN1-218ENST00000556343 SUPT6HQ7KZ85 1726 aaKnown RBP14.01□□□□□ -0.17
ACTN1-218ENST00000556343 WDR7Q9Y4E6 1490 aa14.01□□□□□ -0.17
ACTN1-218ENST00000556343 MAGI3Q5TCQ9 1506 aa14□□□□□ -0.17
ACTN1-218ENST00000556343 CFDP1Q9UEE9 299 aaPredicted RBP13.99□□□□□ -0.17
ACTN1-218ENST00000556343 PHLDB1Q86UU1 1377 aa13.98□□□□□ -0.17
ACTN1-218ENST00000556343 KIF14Q15058 1648 aa13.98□□□□□ -0.17
ACTN1-218ENST00000556343 MYOM3Q5VTT5 1437 aa13.98□□□□□ -0.17
ACTN1-218ENST00000556343 FAM50AQ14320 339 aaKnown RBP13.97□□□□□ -0.17
ACTN1-218ENST00000556343 MIA2Q96PC5 1412 aa13.97□□□□□ -0.17
ACTN1-218ENST00000556343 MAPKBP1O60336 1514 aa13.95□□□□□ -0.18
ACTN1-218ENST00000556343 EFCAB2Q5VUJ9 269 aa13.94□□□□□ -0.18
ACTN1-218ENST00000556343 RRBP1Q9P2E9 1410 aaKnown RBP13.94□□□□□ -0.18
ACTN1-218ENST00000556343 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.94□□□□□ -0.18
ACTN1-218ENST00000556343 FGD6Q6ZV73 1430 aa13.93□□□□□ -0.18
ACTN1-218ENST00000556343 FAM69CQ0P6D2 419 aa13.93□□□□□ -0.18
ACTN1-218ENST00000556343 PCGF6Q9BYE7 350 aa13.93□□□□□ -0.18
ACTN1-218ENST00000556343 ZNF777Q9ULD5 760 aaPredicted RBP13.93□□□□□ -0.18
ACTN1-218ENST00000556343 ABCC10Q5T3U5 1492 aa13.93□□□□□ -0.18
ACTN1-218ENST00000556343 GPATCH8Q9UKJ3 1502 aaKnown RBP13.92□□□□□ -0.18
ACTN1-218ENST00000556343 RSPH4AQ5TD94 716 aa13.91□□□□□ -0.18
ACTN1-218ENST00000556343 PLCH2O75038 1416 aa13.9□□□□□ -0.18
ACTN1-218ENST00000556343 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.9□□□□□ -0.19
ACTN1-218ENST00000556343 CD109Q6YHK3 1445 aa13.9□□□□□ -0.19
ACTN1-218ENST00000556343 ITGAEP38570 1179 aa13.87□□□□□ -0.19
ACTN1-218ENST00000556343 ITSN2Q9NZM3 1697 aa13.87□□□□□ -0.19
ACTN1-218ENST00000556343 ARHGAP5Q13017 1502 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms