RNA–Protein interactions for RNA: ENST00000555238.5

NUMB-214, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NUMB, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-214ENST00000555238 ARAP1Q96P48 1450 aa11.62□□□□□ -0.55
NUMB-214ENST00000555238 ABCA10Q8WWZ4 1543 aa11.61□□□□□ -0.55
NUMB-214ENST00000555238 FAM50AQ14320 339 aaKnown RBP11.6□□□□□ -0.55
NUMB-214ENST00000555238 HRCP23327 699 aa11.59□□□□□ -0.55
NUMB-214ENST00000555238 KIF21BO75037 1637 aa11.58□□□□□ -0.56
NUMB-214ENST00000555238 VPS8Q8N3P4 1428 aa11.56□□□□□ -0.56
NUMB-214ENST00000555238 ARHGAP35Q9NRY4 1499 aa11.56□□□□□ -0.56
NUMB-214ENST00000555238 SNAPC4Q5SXM2 1469 aa11.53□□□□□ -0.56
NUMB-214ENST00000555238 PRDM2Q13029 1718 aa11.52□□□□□ -0.57
NUMB-214ENST00000555238 JPH4Q96JJ6 628 aa11.51□□□□□ -0.57
NUMB-214ENST00000555238 GRIN2BQ13224 1484 aa11.49□□□□□ -0.57
NUMB-214ENST00000555238 IFT140Q96RY7 1462 aa11.49□□□□□ -0.57
NUMB-214ENST00000555238 CHIC2Q9UKJ5 165 aa11.48□□□□□ -0.57
NUMB-214ENST00000555238 ERICH3Q5RHP9 1530 aa11.47□□□□□ -0.57
NUMB-214ENST00000555238 TARBP1Q13395 1621 aaKnown RBP11.47□□□□□ -0.57
NUMB-214ENST00000555238 ZNF777Q9ULD5 760 aaPredicted RBP11.47□□□□□ -0.57
NUMB-214ENST00000555238 BCL11AQ9H165 835 aa11.46□□□□□ -0.57
NUMB-214ENST00000555238 FHAD1B1AJZ9 1412 aa11.46□□□□□ -0.58
NUMB-214ENST00000555238 WDR62O43379 1518 aa11.44□□□□□ -0.58
NUMB-214ENST00000555238 KCNH8Q96L42 1107 aa11.43□□□□□ -0.58
NUMB-214ENST00000555238 MTUS2Q5JR59 1369 aa11.42□□□□□ -0.58
NUMB-214ENST00000555238 THOC2Q8NI27 1593 aaKnown RBP11.4□□□□□ -0.58
NUMB-214ENST00000555238 ABCA5Q8WWZ7 1642 aa11.4□□□□□ -0.58
NUMB-214ENST00000555238 EIF4G3O43432 1585 aaKnown RBP11.4□□□□□ -0.58
NUMB-214ENST00000555238 RRP7BPQ9NSQ0 103 aa11.37□□□□□ -0.59
NUMB-214ENST00000555238 PHLDB1Q86UU1 1377 aa11.37□□□□□ -0.59
NUMB-214ENST00000555238 GRIN2AQ12879 1464 aa11.37□□□□□ -0.59
NUMB-214ENST00000555238 ZNF644Q9H582 1327 aaPredicted RBP11.37□□□□□ -0.59
NUMB-214ENST00000555238 NEUROD1Q13562 356 aa11.34□□□□□ -0.59
NUMB-214ENST00000555238 PLB1Q6P1J6 1458 aa11.33□□□□□ -0.6
NUMB-214ENST00000555238 WDR97A6NE52 1622 aa11.32□□□□□ -0.6
NUMB-214ENST00000555238 CDK13Q14004 1512 aaKnown RBP11.32□□□□□ -0.6
NUMB-214ENST00000555238 SYNJ2O15056 1496 aa11.32□□□□□ -0.6
NUMB-214ENST00000555238 PRG4Q92954 1404 aaPredicted RBP11.32□□□□□ -0.6
NUMB-214ENST00000555238 PCF11O94913 1555 aaKnown RBP11.31□□□□□ -0.6
NUMB-214ENST00000555238 ADAMTS12P58397 1594 aa11.31□□□□□ -0.6
NUMB-214ENST00000555238 CCNB3Q8WWL7 1395 aa11.31□□□□□ -0.6
NUMB-214ENST00000555238 CUL7Q14999 1698 aa11.31□□□□□ -0.6
NUMB-214ENST00000555238 PBRM1Q86U86 1689 aa11.31□□□□□ -0.6
NUMB-214ENST00000555238 FMN1Q68DA7 1419 aa11.3□□□□□ -0.6
NUMB-214ENST00000555238 KIAA0586Q9BVV6 1533 aa11.29□□□□□ -0.6
NUMB-214ENST00000555238 IQGAP2Q13576 1575 aa11.29□□□□□ -0.6
NUMB-214ENST00000555238 TRIM52Q96A61 297 aa11.28□□□□□ -0.6
NUMB-214ENST00000555238 PLEKHD1A6NEE1 506 aa11.28□□□□□ -0.6
NUMB-214ENST00000555238 LRRC9Q6ZRR7 1453 aa11.28□□□□□ -0.6
NUMB-214ENST00000555238 PTPRGP23470 1445 aa11.27□□□□□ -0.61
NUMB-214ENST00000555238 CYB5RLQ6IPT4 315 aa11.27□□□□□ -0.61
NUMB-214ENST00000555238 SIN3AQ96ST3 1273 aa11.27□□□□□ -0.61
NUMB-214ENST00000555238 CEP170Q5SW79 1584 aa11.27□□□□□ -0.61
NUMB-214ENST00000555238 MYT1LQ9UL68 1186 aa11.26□□□□□ -0.61
NUMB-214ENST00000555238 MAGI1Q96QZ7 1491 aaPredicted RBP11.26□□□□□ -0.61
NUMB-214ENST00000555238 FOXD1Q16676 465 aa11.26□□□□□ -0.61
NUMB-214ENST00000555238 CASKIN1Q8WXD9 1431 aa11.26□□□□□ -0.61
NUMB-214ENST00000555238 OSCARQ8IYS5 282 aa11.26□□□□□ -0.61
NUMB-214ENST00000555238 CFDP1Q9UEE9 299 aaPredicted RBP11.25□□□□□ -0.61
NUMB-214ENST00000555238 SCAF1Q9H7N4 1312 aaKnown RBP11.25□□□□□ -0.61
NUMB-214ENST00000555238 CDK11AQ9UQ88 783 aaPredicted RBP11.25□□□□□ -0.61
NUMB-214ENST00000555238 DISP1Q96F81 1524 aa11.24□□□□□ -0.61
NUMB-214ENST00000555238 CARMIL2Q6F5E8 1435 aa11.24□□□□□ -0.61
NUMB-214ENST00000555238 DAXXQ9UER7 740 aaPredicted RBP11.22□□□□□ -0.61
NUMB-214ENST00000555238 TIAM1Q13009 1591 aa11.22□□□□□ -0.61
NUMB-214ENST00000555238 ERCC6L2Q5T890 1561 aa11.22□□□□□ -0.61
NUMB-214ENST00000555238 HNRNPMP52272 730 aaKnown RBP eCLIP11.22□□□□□ -0.61
NUMB-214ENST00000555238 HIRIP3Q9BW71 556 aaPredicted RBP11.22□□□□□ -0.61
NUMB-214ENST00000555238 CTTNBP2Q8WZ74 1663 aa11.21□□□□□ -0.62
NUMB-214ENST00000555238 ZEB1P37275 1124 aaPredicted RBP11.2□□□□□ -0.62
NUMB-214ENST00000555238 RAB3GAP2Q9H2M9 1393 aa11.19□□□□□ -0.62
NUMB-214ENST00000555238 EPRSP07814 1512 aaKnown RBP11.19□□□□□ -0.62
NUMB-214ENST00000555238 NCOA2Q15596 1464 aa11.19□□□□□ -0.62
NUMB-214ENST00000555238 NUP160Q12769 1436 aa11.18□□□□□ -0.62
NUMB-214ENST00000555238 MAGI3Q5TCQ9 1506 aa11.18□□□□□ -0.62
NUMB-214ENST00000555238 FYCO1Q9BQS8 1478 aa11.18□□□□□ -0.62
NUMB-214ENST00000555238 EFCAB5A4FU69 1503 aa11.18□□□□□ -0.62
NUMB-214ENST00000555238 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.17□□□□□ -0.623e-7■□□□□ 9.2
NUMB-214ENST00000555238 NUP153P49790 1475 aaKnown RBP11.17□□□□□ -0.62
NUMB-214ENST00000555238 PTPRKQ15262 1439 aa11.15□□□□□ -0.62
NUMB-214ENST00000555238 FGD6Q6ZV73 1430 aa11.14□□□□□ -0.63
NUMB-214ENST00000555238 SENP3Q9H4L4 574 aaPredicted RBP11.14□□□□□ -0.63
NUMB-214ENST00000555238 KIAA0556O60303 1618 aa11.13□□□□□ -0.63
NUMB-214ENST00000555238 RRBP1Q9P2E9 1410 aaKnown RBP11.13□□□□□ -0.63
NUMB-214ENST00000555238 SAMD9Q5K651 1589 aa11.13□□□□□ -0.63
NUMB-214ENST00000555238 UGGT2Q9NYU1 1516 aa11.13□□□□□ -0.63
NUMB-214ENST00000555238 CHD1O14646 1710 aa11.13□□□□□ -0.63
NUMB-214ENST00000555238 NPM1P06748 294 aaKnown RBP eCLIP11.12□□□□□ -0.63
NUMB-214ENST00000555238 CENPBP07199 599 aaPredicted RBP11.12□□□□□ -0.63
NUMB-214ENST00000555238 ATP10BO94823 1461 aa11.11□□□□□ -0.63
NUMB-214ENST00000555238 DHX57Q6P158 1386 aaKnown RBP11.11□□□□□ -0.63
NUMB-214ENST00000555238 ZNF326Q5BKZ1 582 aaKnown RBP11.1□□□□□ -0.63
NUMB-214ENST00000555238 MYOM3Q5VTT5 1437 aa11.1□□□□□ -0.63
NUMB-214ENST00000555238 CNGB1Q14028 1251 aaPredicted RBP11.1□□□□□ -0.63
NUMB-214ENST00000555238 ARHGEF11O15085 1522 aa11.09□□□□□ -0.63
NUMB-214ENST00000555238 SETD5Q9C0A6 1442 aa11.09□□□□□ -0.63
NUMB-214ENST00000555238 EIF5BO60841 1220 aaKnown RBP11.09□□□□□ -0.63
NUMB-214ENST00000555238 AFAP1Q8N556 730 aa11.08□□□□□ -0.64
NUMB-214ENST00000555238 TSPY4P0CV99 314 aa11.08□□□□□ -0.64
NUMB-214ENST00000555238 TSPY10P0CW01 314 aa11.08□□□□□ -0.64
NUMB-214ENST00000555238 UACAQ9BZF9 1416 aa11.07□□□□□ -0.64
NUMB-214ENST00000555238 LRRIQ1Q96JM4 1722 aa11.07□□□□□ -0.64
NUMB-214ENST00000555238 CCDC18Q5T9S5 1454 aa11.06□□□□□ -0.64
NUMB-214ENST00000555238 SLC4A1APQ9BWU0 796 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms