RNA–Protein interactions for RNA: ENST00000555238.5

NUMB-214, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NUMB, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-214ENST00000555238 NISCHQ9Y2I1 1504 aa16.44■□□□□ 0.22
NUMB-214ENST00000555238 DCAF8L2P0C7V8 631 aa14.64□□□□□ -0.07
NUMB-214ENST00000555238 SHROOM4Q9ULL8 1493 aa14.32□□□□□ -0.12
NUMB-214ENST00000555238 ABCC9O60706 1549 aa13.97□□□□□ -0.17
NUMB-214ENST00000555238 CCDC180Q9P1Z9 1646 aa13.86□□□□□ -0.19
NUMB-214ENST00000555238 SUPT5HO00267 1087 aaKnown RBP13.84□□□□□ -0.19
NUMB-214ENST00000555238 ZCCHC6Q5VYS8 1495 aaKnown RBP13.72□□□□□ -0.21
NUMB-214ENST00000555238 PABPN1Q86U42 306 aaKnown RBP eCLIP13.48□□□□□ -0.25
NUMB-214ENST00000555238 SCRIBQ14160 1630 aa13.4□□□□□ -0.26
NUMB-214ENST00000555238 DCAF1Q9Y4B6 1507 aa13.18□□□□□ -0.3
NUMB-214ENST00000555238 NACADO15069 1562 aa13.11□□□□□ -0.31
NUMB-214ENST00000555238 CECR2Q9BXF3 1484 aa13.1□□□□□ -0.31
NUMB-214ENST00000555238 RB1CC1Q8TDY2 1594 aa13.08□□□□□ -0.31
NUMB-214ENST00000555238 EHMT2Q96KQ7 1210 aa13.07□□□□□ -0.32
NUMB-214ENST00000555238 RSF1Q96T23 1441 aaPredicted RBP12.95□□□□□ -0.34
NUMB-214ENST00000555238 MYO15BQ96JP2 1530 aa12.93□□□□□ -0.34
NUMB-214ENST00000555238 FAM9AQ8IZU1 332 aaPredicted RBP12.92□□□□□ -0.34
NUMB-214ENST00000555238 CHIC1Q5VXU3 224 aa12.91□□□□□ -0.34
NUMB-214ENST00000555238 MROH2BQ7Z745 1585 aa12.89□□□□□ -0.35
NUMB-214ENST00000555238 LOC105371045A0A1W2PR82 267 aa12.77□□□□□ -0.37
NUMB-214ENST00000555238 BICRAQ9NZM4 1560 aa12.75□□□□□ -0.37
NUMB-214ENST00000555238 WIZO95785 1651 aa12.75□□□□□ -0.37
NUMB-214ENST00000555238 UNC13AQ9UPW8 1703 aa12.75□□□□□ -0.37
NUMB-214ENST00000555238 TRIM41Q8WV44 630 aa12.74□□□□□ -0.37
NUMB-214ENST00000555238 PELP1Q8IZL8 1130 aaKnown RBP12.71□□□□□ -0.38
NUMB-214ENST00000555238 DNAJC5BQ9UF47 199 aa12.66□□□□□ -0.38
NUMB-214ENST00000555238 BAZ1AQ9NRL2 1556 aaPredicted RBP12.62□□□□□ -0.39
NUMB-214ENST00000555238 MYT1Q01538 1121 aa12.61□□□□□ -0.39
NUMB-214ENST00000555238 SMARCA4P51532 1647 aa12.57□□□□□ -0.4
NUMB-214ENST00000555238 RANGAP1P46060 587 aaPredicted RBP12.54□□□□□ -0.4
NUMB-214ENST00000555238 CCDC88BA6NC98 1476 aa12.53□□□□□ -0.4
NUMB-214ENST00000555238 ATAD2BQ9ULI0 1458 aa12.5□□□□□ -0.41
NUMB-214ENST00000555238 BAZ1BQ9UIG0 1483 aaKnown RBP12.48□□□□□ -0.41
NUMB-214ENST00000555238 PPARGC1BQ86YN6 1023 aaKnown RBP12.46□□□□□ -0.42
NUMB-214ENST00000555238 TTBK1Q5TCY1 1321 aaPredicted RBP12.44□□□□□ -0.42
NUMB-214ENST00000555238 EIF4G1Q04637 1599 aaKnown RBP12.43□□□□□ -0.42
NUMB-214ENST00000555238 ABCC8Q09428 1581 aa12.43□□□□□ -0.42
NUMB-214ENST00000555238 TOP2AP11388 1531 aaKnown RBP12.39□□□□□ -0.43
NUMB-214ENST00000555238 SMARCA2P51531 1590 aa12.36□□□□□ -0.43
NUMB-214ENST00000555238 UBTFP17480 764 aaKnown RBP12.31□□□□□ -0.44
NUMB-214ENST00000555238 CC2D2AQ9P2K1 1620 aa12.3□□□□□ -0.44
NUMB-214ENST00000555238 SOGA1O94964 1423 aa12.28□□□□□ -0.44
NUMB-214ENST00000555238 RUSC2Q8N2Y8 1516 aa12.26□□□□□ -0.45
NUMB-214ENST00000555238 NCAPD3P42695 1498 aa12.25□□□□□ -0.45
NUMB-214ENST00000555238 PCGF6Q9BYE7 350 aa12.24□□□□□ -0.45
NUMB-214ENST00000555238 NESP48681 1621 aa12.24□□□□□ -0.45
NUMB-214ENST00000555238 WRNQ14191 1432 aaPredicted RBP eCLIP12.22□□□□□ -0.45
NUMB-214ENST00000555238 CSRNP3Q8WYN3 585 aa12.18□□□□□ -0.46
NUMB-214ENST00000555238 PEG3Q9GZU2 1588 aa12.15□□□□□ -0.47
NUMB-214ENST00000555238 CADPSQ9ULU8 1353 aa12.13□□□□□ -0.47
NUMB-214ENST00000555238 SYNJ1O43426 1573 aa12.07□□□□□ -0.48
NUMB-214ENST00000555238 P3H3Q8IVL6 736 aa12.07□□□□□ -0.48
NUMB-214ENST00000555238 HMGXB3Q12766 1538 aa12.06□□□□□ -0.48
NUMB-214ENST00000555238 ATP1B4Q9UN42 357 aaPredicted RBP12.05□□□□□ -0.48
NUMB-214ENST00000555238 CFTRP13569 1480 aa12.04□□□□□ -0.48
NUMB-214ENST00000555238 FANCD2Q9BXW9 1451 aa12.01□□□□□ -0.49
NUMB-214ENST00000555238 TDRD9Q8NDG6 1382 aaKnown RBP12□□□□□ -0.49
NUMB-214ENST00000555238 RAD54L2Q9Y4B4 1467 aa11.99□□□□□ -0.49
NUMB-214ENST00000555238 FBLN2P98095 1184 aa11.99□□□□□ -0.49
NUMB-214ENST00000555238 CUX1P39880 1505 aa11.98□□□□□ -0.49
NUMB-214ENST00000555238 CUX2O14529 1486 aa11.95□□□□□ -0.5
NUMB-214ENST00000555238 ARID3CA6NKF2 412 aa11.95□□□□□ -0.5
NUMB-214ENST00000555238 RAPGEF2Q9Y4G8 1499 aa11.92□□□□□ -0.5
NUMB-214ENST00000555238 FGD5Q6ZNL6 1462 aa11.91□□□□□ -0.5
NUMB-214ENST00000555238 ERCC6Q03468 1493 aa11.9□□□□□ -0.5
NUMB-214ENST00000555238 CEP162Q5TB80 1403 aa11.88□□□□□ -0.51
NUMB-214ENST00000555238 CEP164Q9UPV0 1460 aa11.88□□□□□ -0.51
NUMB-214ENST00000555238 PDS5BQ9NTI5 1447 aa11.87□□□□□ -0.51
NUMB-214ENST00000555238 KIF27Q86VH2 1401 aa11.86□□□□□ -0.51
NUMB-214ENST00000555238 SLC24A1O60721 1099 aa11.85□□□□□ -0.51
NUMB-214ENST00000555238 APLP2Q06481 763 aa11.85□□□□□ -0.51
NUMB-214ENST00000555238 PRKCSHP14314 528 aaPredicted RBP11.84□□□□□ -0.51
NUMB-214ENST00000555238 IGF1RP08069 1367 aa11.84□□□□□ -0.51
NUMB-214ENST00000555238 TRIM26Q12899 539 aaPredicted RBP11.83□□□□□ -0.52
NUMB-214ENST00000555238 AQRO60306 1485 aaKnown RBP eCLIP11.83□□□□□ -0.521e-6■■■□□ 18.1
NUMB-214ENST00000555238 URB2Q14146 1524 aaKnown RBP11.83□□□□□ -0.52
NUMB-214ENST00000555238 TOP2BQ02880 1626 aa11.83□□□□□ -0.52
NUMB-214ENST00000555238 ITGAEP38570 1179 aa11.82□□□□□ -0.52
NUMB-214ENST00000555238 TOPBP1Q92547 1522 aa11.82□□□□□ -0.52
NUMB-214ENST00000555238 CARMIL1Q5VZK9 1371 aa11.82□□□□□ -0.52
NUMB-214ENST00000555238 HNRNPUL2Q1KMD3 747 aaKnown RBP11.82□□□□□ -0.52
NUMB-214ENST00000555238 POLA1P09884 1462 aaPredicted RBP11.81□□□□□ -0.52
NUMB-214ENST00000555238 GOLGA3Q08378 1498 aa11.81□□□□□ -0.52
NUMB-214ENST00000555238 CLIP1P30622 1438 aa11.8□□□□□ -0.52
NUMB-214ENST00000555238 TNIKQ9UKE5 1360 aa11.8□□□□□ -0.52
NUMB-214ENST00000555238 ERICH6Q7L0X2 663 aa11.77□□□□□ -0.53
NUMB-214ENST00000555238 EEA1Q15075 1411 aa11.77□□□□□ -0.53
NUMB-214ENST00000555238 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.76□□□□□ -0.53
NUMB-214ENST00000555238 KANK4Q5T7N3 995 aaPredicted RBP11.73□□□□□ -0.53
NUMB-214ENST00000555238 ZNF608Q9ULD9 1512 aaPredicted RBP11.73□□□□□ -0.53
NUMB-214ENST00000555238 CHMP7Q8WUX9 453 aaPredicted RBP11.73□□□□□ -0.53
NUMB-214ENST00000555238 KIF21AQ7Z4S6 1674 aa11.73□□□□□ -0.53
NUMB-214ENST00000555238 LAMC3Q9Y6N6 1575 aa11.72□□□□□ -0.53
NUMB-214ENST00000555238 BIVM-ERCC5R4GMW8 1640 aa11.68□□□□□ -0.54
NUMB-214ENST00000555238 PRXQ9BXM0 1461 aa11.68□□□□□ -0.54
NUMB-214ENST00000555238 DNMBPQ6XZF7 1577 aa11.68□□□□□ -0.54
NUMB-214ENST00000555238 GAPVD1Q14C86 1478 aa11.67□□□□□ -0.54
NUMB-214ENST00000555238 MRC2Q9UBG0 1479 aa11.66□□□□□ -0.54
NUMB-214ENST00000555238 FHOD3Q2V2M9 1422 aa11.64□□□□□ -0.55
NUMB-214ENST00000555238 CCER1Q8TC90 406 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 560 ms