RNA–Protein interactions for RNA: ENST00000555075.5

ACTN1-214, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 828 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-214ENST00000555075 CEP170Q5SW79 1584 aa19.89■□□□□ 0.77
ACTN1-214ENST00000555075 RAPGEF2Q9Y4G8 1499 aa19.88■□□□□ 0.77
ACTN1-214ENST00000555075 NUP160Q12769 1436 aa19.86■□□□□ 0.77
ACTN1-214ENST00000555075 TRHP20396 242 aaPredicted RBP19.83■□□□□ 0.77
ACTN1-214ENST00000555075 ERCC6L2Q5T890 1561 aa19.81■□□□□ 0.76
ACTN1-214ENST00000555075 SHROOM2Q13796 1616 aa19.77■□□□□ 0.76
ACTN1-214ENST00000555075 JPH4Q96JJ6 628 aa19.77■□□□□ 0.76
ACTN1-214ENST00000555075 EHMT2Q96KQ7 1210 aa19.77■□□□□ 0.76
ACTN1-214ENST00000555075 PRXQ9BXM0 1461 aa19.77■□□□□ 0.76
ACTN1-214ENST00000555075 KIAA0586Q9BVV6 1533 aa19.76■□□□□ 0.75
ACTN1-214ENST00000555075 PRG4Q92954 1404 aaPredicted RBP19.71■□□□□ 0.75
ACTN1-214ENST00000555075 UBTFP17480 764 aaKnown RBP19.71■□□□□ 0.75
ACTN1-214ENST00000555075 IQGAP2Q13576 1575 aa19.69■□□□□ 0.74
ACTN1-214ENST00000555075 CARMIL2Q6F5E8 1435 aa19.67■□□□□ 0.74
ACTN1-214ENST00000555075 TTBK1Q5TCY1 1321 aaPredicted RBP19.66■□□□□ 0.74
ACTN1-214ENST00000555075 RANGAP1P46060 587 aaPredicted RBP19.65■□□□□ 0.74
ACTN1-214ENST00000555075 KIF21BO75037 1637 aa19.64■□□□□ 0.73
ACTN1-214ENST00000555075 GOLGA3Q08378 1498 aa19.63■□□□□ 0.73
ACTN1-214ENST00000555075 CTTNBP2Q8WZ74 1663 aa19.62■□□□□ 0.73
ACTN1-214ENST00000555075 TNIKQ9UKE5 1360 aa19.54■□□□□ 0.72
ACTN1-214ENST00000555075 UGGT2Q9NYU1 1516 aa19.53■□□□□ 0.72
ACTN1-214ENST00000555075 PTPRGP23470 1445 aa19.52■□□□□ 0.72
ACTN1-214ENST00000555075 P3H3Q8IVL6 736 aa19.51■□□□□ 0.71
ACTN1-214ENST00000555075 NPM1P06748 294 aaKnown RBP eCLIP19.5■□□□□ 0.71
ACTN1-214ENST00000555075 KIAA0556O60303 1618 aa19.47■□□□□ 0.71
ACTN1-214ENST00000555075 DISP1Q96F81 1524 aa19.46■□□□□ 0.71
ACTN1-214ENST00000555075 ADCY10Q96PN6 1610 aa19.44■□□□□ 0.7
ACTN1-214ENST00000555075 KIF13AQ9H1H9 1805 aa19.41■□□□□ 0.7
ACTN1-214ENST00000555075 EFCAB5A4FU69 1503 aa19.38■□□□□ 0.69
ACTN1-214ENST00000555075 MAPKBP1O60336 1514 aa19.38■□□□□ 0.69
ACTN1-214ENST00000555075 UACAQ9BZF9 1416 aa19.37■□□□□ 0.69
ACTN1-214ENST00000555075 LOC105371045A0A1W2PR82 267 aa19.35■□□□□ 0.69
ACTN1-214ENST00000555075 FHOD3Q2V2M9 1422 aa19.34■□□□□ 0.69
ACTN1-214ENST00000555075 SAMD9Q5K651 1589 aa19.34■□□□□ 0.69
ACTN1-214ENST00000555075 ABCC10Q5T3U5 1492 aa19.34■□□□□ 0.69
ACTN1-214ENST00000555075 DIP2BQ9P265 1576 aa19.32■□□□□ 0.68
ACTN1-214ENST00000555075 ATP1B4Q9UN42 357 aaPredicted RBP19.32■□□□□ 0.68
ACTN1-214ENST00000555075 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.31■□□□□ 0.68
ACTN1-214ENST00000555075 FAM69CQ0P6D2 419 aa19.31■□□□□ 0.68
ACTN1-214ENST00000555075 HNRNPUL2Q1KMD3 747 aaKnown RBP19.31■□□□□ 0.68
ACTN1-214ENST00000555075 CLIP1P30622 1438 aa19.3■□□□□ 0.68
ACTN1-214ENST00000555075 ABCC2Q92887 1545 aa19.28■□□□□ 0.68
ACTN1-214ENST00000555075 PLB1Q6P1J6 1458 aa19.28■□□□□ 0.68
ACTN1-214ENST00000555075 ARID3CA6NKF2 412 aa19.27■□□□□ 0.68
ACTN1-214ENST00000555075 UHRF1BP1LA0JNW5 1464 aa19.27■□□□□ 0.67
ACTN1-214ENST00000555075 ARHGAP35Q9NRY4 1499 aa19.26■□□□□ 0.67
ACTN1-214ENST00000555075 FMN1Q68DA7 1419 aa19.25■□□□□ 0.67
ACTN1-214ENST00000555075 CEP162Q5TB80 1403 aa19.22■□□□□ 0.67
ACTN1-214ENST00000555075 ABCA8O94911 1581 aa19.21■□□□□ 0.67
ACTN1-214ENST00000555075 RAPGEF6Q8TEU7 1601 aa19.2■□□□□ 0.66
ACTN1-214ENST00000555075 ASXL2Q76L83 1435 aa19.18■□□□□ 0.66
ACTN1-214ENST00000555075 TSPOAP1O95153 1857 aa19.17■□□□□ 0.66
ACTN1-214ENST00000555075 KDM5BQ9UGL1 1544 aa19.16■□□□□ 0.66
ACTN1-214ENST00000555075 ZCCHC11Q5TAX3 1644 aaKnown RBP19.14■□□□□ 0.66
ACTN1-214ENST00000555075 KDM6BO15054 1643 aa19.14■□□□□ 0.65
ACTN1-214ENST00000555075 AEBP2Q6ZN18 517 aaPredicted RBP19.12■□□□□ 0.65
ACTN1-214ENST00000555075 KCNH8Q96L42 1107 aa19.12■□□□□ 0.65
ACTN1-214ENST00000555075 CDK11AQ9UQ88 783 aaPredicted RBP19.12■□□□□ 0.65
ACTN1-214ENST00000555075 HECW1Q76N89 1606 aa19.11■□□□□ 0.65
ACTN1-214ENST00000555075 PLEKHD1A6NEE1 506 aa19.11■□□□□ 0.65
ACTN1-214ENST00000555075 GLI2P10070 1586 aa19.1■□□□□ 0.65
ACTN1-214ENST00000555075 ATP10BO94823 1461 aa19.09■□□□□ 0.65
ACTN1-214ENST00000555075 NUP153P49790 1475 aaKnown RBP19.09■□□□□ 0.65
ACTN1-214ENST00000555075 EPRSP07814 1512 aaKnown RBP19.07■□□□□ 0.64
ACTN1-214ENST00000555075 WDR7Q9Y4E6 1490 aa19.07■□□□□ 0.64
ACTN1-214ENST00000555075 PPRC1Q5VV67 1664 aaKnown RBP19.06■□□□□ 0.64
ACTN1-214ENST00000555075 CASKIN1Q8WXD9 1431 aa19.06■□□□□ 0.64
ACTN1-214ENST00000555075 MAP3K4Q9Y6R4 1608 aa19.03■□□□□ 0.64
ACTN1-214ENST00000555075 FYCO1Q9BQS8 1478 aa19.03■□□□□ 0.64
ACTN1-214ENST00000555075 PCF11O94913 1555 aaKnown RBP19.02■□□□□ 0.64
ACTN1-214ENST00000555075 APLP2Q06481 763 aa19.02■□□□□ 0.64
ACTN1-214ENST00000555075 CCDC18Q5T9S5 1454 aa19.02■□□□□ 0.63
ACTN1-214ENST00000555075 CDK13Q14004 1512 aaKnown RBP19.01■□□□□ 0.63
ACTN1-214ENST00000555075 VPS8Q8N3P4 1428 aa18.98■□□□□ 0.63
ACTN1-214ENST00000555075 TEX14Q8IWB6 1497 aa18.97■□□□□ 0.63
ACTN1-214ENST00000555075 CD109Q6YHK3 1445 aa18.92■□□□□ 0.62
ACTN1-214ENST00000555075 MTUS2Q5JR59 1369 aa18.92■□□□□ 0.62
ACTN1-214ENST00000555075 CFAP43Q8NDM7 1665 aa18.92■□□□□ 0.62
ACTN1-214ENST00000555075 TROQ12816 1431 aaPredicted RBP18.9■□□□□ 0.62
ACTN1-214ENST00000555075 COL17A1Q9UMD9 1497 aaPredicted RBP18.89■□□□□ 0.61
ACTN1-214ENST00000555075 MAGI3Q5TCQ9 1506 aa18.86■□□□□ 0.61
ACTN1-214ENST00000555075 KIF14Q15058 1648 aa18.85■□□□□ 0.61
ACTN1-214ENST00000555075 LRRIQ1Q96JM4 1722 aa18.83■□□□□ 0.61
ACTN1-214ENST00000555075 KDM4FA0A1W2PPD8 638 aa18.82■□□□□ 0.6
ACTN1-214ENST00000555075 ABCA9Q8IUA7 1624 aa18.82■□□□□ 0.6
ACTN1-214ENST00000555075 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.79■□□□□ 0.6
ACTN1-214ENST00000555075 TIAM1Q13009 1591 aa18.78■□□□□ 0.6
ACTN1-214ENST00000555075 EFCAB2Q5VUJ9 269 aa18.78■□□□□ 0.6
ACTN1-214ENST00000555075 EHBP1L1Q8N3D4 1523 aa18.78■□□□□ 0.6
ACTN1-214ENST00000555075 CCNB3Q8WWL7 1395 aa18.77■□□□□ 0.6
ACTN1-214ENST00000555075 ADGRL1O94910 1474 aa18.76■□□□□ 0.59
ACTN1-214ENST00000555075 TTC37Q6PGP7 1564 aa18.76■□□□□ 0.59
ACTN1-214ENST00000555075 PHLDB1Q86UU1 1377 aa18.75■□□□□ 0.59
ACTN1-214ENST00000555075 ZNF777Q9ULD5 760 aaPredicted RBP18.74■□□□□ 0.59
ACTN1-214ENST00000555075 FANCAO15360 1455 aa18.73■□□□□ 0.59
ACTN1-214ENST00000555075 ARHGAP5Q13017 1502 aa18.73■□□□□ 0.59
ACTN1-214ENST00000555075 MAP3K1Q13233 1512 aa18.73■□□□□ 0.59
ACTN1-214ENST00000555075 PLCH2O75038 1416 aa18.73■□□□□ 0.59
ACTN1-214ENST00000555075 CFAP74Q9C0B2 1584 aa18.72■□□□□ 0.59
ACTN1-214ENST00000555075 LRRC9Q6ZRR7 1453 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms