RNA–Protein interactions for RNA: ENST00000554947.5

SDR39U1-209, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,203 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-209ENST00000554947 KIAA0586Q9BVV6 1533 aa40.52■■■■■ 4.08
SDR39U1-209ENST00000554947 PRXQ9BXM0 1461 aa40.51■■■■■ 4.08
SDR39U1-209ENST00000554947 CSRNP3Q8WYN3 585 aa40.48■■■■■ 4.07
SDR39U1-209ENST00000554947 JPH4Q96JJ6 628 aa40.39■■■■■ 4.06
SDR39U1-209ENST00000554947 ARAP1Q96P48 1450 aa40.38■■■■■ 4.05
SDR39U1-209ENST00000554947 IQGAP2Q13576 1575 aa40.31■■■■■ 4.04
SDR39U1-209ENST00000554947 PRG4Q92954 1404 aaPredicted RBP40.29■■■■■ 4.04
SDR39U1-209ENST00000554947 ERCC6L2Q5T890 1561 aa40.28■■■■■ 4.04
SDR39U1-209ENST00000554947 CTTNBP2Q8WZ74 1663 aa40.27■■■■■ 4.04
SDR39U1-209ENST00000554947 CYB5RLQ6IPT4 315 aa40.24■■■■■ 4.03
SDR39U1-209ENST00000554947 FAM9AQ8IZU1 332 aaPredicted RBP40.23■■■■■ 4.03
SDR39U1-209ENST00000554947 KIF21BO75037 1637 aa40.2■■■■■ 4.03
SDR39U1-209ENST00000554947 UGGT2Q9NYU1 1516 aa40.11■■■■■ 4.01
SDR39U1-209ENST00000554947 CARMIL2Q6F5E8 1435 aa40.07■■■■■ 4
SDR39U1-209ENST00000554947 DISP1Q96F81 1524 aa39.98■■■■□ 3.99
SDR39U1-209ENST00000554947 TNIKQ9UKE5 1360 aa39.92■■■■□ 3.98
SDR39U1-209ENST00000554947 GOLGA3Q08378 1498 aa39.92■■■■□ 3.98
SDR39U1-209ENST00000554947 KIAA0556O60303 1618 aa39.91■■■■□ 3.98
SDR39U1-209ENST00000554947 PTPRGP23470 1445 aa39.84■■■■□ 3.97
SDR39U1-209ENST00000554947 SAMD9Q5K651 1589 aa39.74■■■■□ 3.95
SDR39U1-209ENST00000554947 UBTFP17480 764 aaKnown RBP39.73■■■■□ 3.95
SDR39U1-209ENST00000554947 ADCY10Q96PN6 1610 aa39.69■■■■□ 3.94
SDR39U1-209ENST00000554947 UHRF1BP1LA0JNW5 1464 aa39.62■■■■□ 3.93
SDR39U1-209ENST00000554947 EFCAB5A4FU69 1503 aa39.61■■■■□ 3.93
SDR39U1-209ENST00000554947 EHMT2Q96KQ7 1210 aa39.61■■■■□ 3.93
SDR39U1-209ENST00000554947 UACAQ9BZF9 1416 aa39.61■■■■□ 3.93
SDR39U1-209ENST00000554947 TTBK1Q5TCY1 1321 aaPredicted RBP39.6■■■■□ 3.93
SDR39U1-209ENST00000554947 ABCC2Q92887 1545 aa39.55■■■■□ 3.92
SDR39U1-209ENST00000554947 NPM1P06748 294 aaKnown RBP eCLIP39.53■■■■□ 3.92
SDR39U1-209ENST00000554947 P3H3Q8IVL6 736 aa39.49■■■■□ 3.91
SDR39U1-209ENST00000554947 ABCA8O94911 1581 aa39.48■■■■□ 3.91
SDR39U1-209ENST00000554947 RANGAP1P46060 587 aaPredicted RBP39.46■■■■□ 3.91
SDR39U1-209ENST00000554947 MAPKBP1O60336 1514 aa39.45■■■■□ 3.91
SDR39U1-209ENST00000554947 PLB1Q6P1J6 1458 aa39.43■■■■□ 3.9
SDR39U1-209ENST00000554947 FHOD3Q2V2M9 1422 aa39.4■■■■□ 3.9
SDR39U1-209ENST00000554947 KDM5BQ9UGL1 1544 aa39.4■■■■□ 3.9
SDR39U1-209ENST00000554947 ARHGAP35Q9NRY4 1499 aa39.37■■■■□ 3.89
SDR39U1-209ENST00000554947 TRHP20396 242 aaPredicted RBP39.34■■■■□ 3.89
SDR39U1-209ENST00000554947 ZCCHC11Q5TAX3 1644 aaKnown RBP39.31■■■■□ 3.88
SDR39U1-209ENST00000554947 RAPGEF6Q8TEU7 1601 aa39.31■■■■□ 3.88
SDR39U1-209ENST00000554947 FMN1Q68DA7 1419 aa39.23■■■■□ 3.87
SDR39U1-209ENST00000554947 KIF13AQ9H1H9 1805 aa39.22■■■■□ 3.87
SDR39U1-209ENST00000554947 ABCC10Q5T3U5 1492 aa39.22■■■■□ 3.87
SDR39U1-209ENST00000554947 ASXL2Q76L83 1435 aa39.2■■■■□ 3.87
SDR39U1-209ENST00000554947 CLIP1P30622 1438 aa39.18■■■■□ 3.86
SDR39U1-209ENST00000554947 DIP2BQ9P265 1576 aa39.16■■■■□ 3.86
SDR39U1-209ENST00000554947 NUP153P49790 1475 aaKnown RBP39.12■■■■□ 3.85
SDR39U1-209ENST00000554947 ATP10BO94823 1461 aa39.11■■■■□ 3.85
SDR39U1-209ENST00000554947 LOC105371045A0A1W2PR82 267 aa39.09■■■■□ 3.85
SDR39U1-209ENST00000554947 WDR7Q9Y4E6 1490 aa39.05■■■■□ 3.84
SDR39U1-209ENST00000554947 FAM69CQ0P6D2 419 aa39.05■■■■□ 3.84
SDR39U1-209ENST00000554947 CEP162Q5TB80 1403 aa39.04■■■■□ 3.84
SDR39U1-209ENST00000554947 GLI2P10070 1586 aa39.04■■■■□ 3.84
SDR39U1-209ENST00000554947 HECW1Q76N89 1606 aa39.02■■■■□ 3.84
SDR39U1-209ENST00000554947 EPRSP07814 1512 aaKnown RBP38.99■■■■□ 3.83
SDR39U1-209ENST00000554947 ARID3CA6NKF2 412 aa38.94■■■■□ 3.82
SDR39U1-209ENST00000554947 CASKIN1Q8WXD9 1431 aa38.92■■■■□ 3.82
SDR39U1-209ENST00000554947 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.88■■■■□ 3.81
SDR39U1-209ENST00000554947 HNRNPUL2Q1KMD3 747 aaKnown RBP38.88■■■■□ 3.81
SDR39U1-209ENST00000554947 PCF11O94913 1555 aaKnown RBP38.87■■■■□ 3.81
SDR39U1-209ENST00000554947 FYCO1Q9BQS8 1478 aa38.85■■■■□ 3.81
SDR39U1-209ENST00000554947 MAP3K4Q9Y6R4 1608 aa38.84■■■■□ 3.81
SDR39U1-209ENST00000554947 CDK13Q14004 1512 aaKnown RBP38.83■■■■□ 3.81
SDR39U1-209ENST00000554947 TSPOAP1O95153 1857 aa38.81■■■■□ 3.8
SDR39U1-209ENST00000554947 LRRIQ1Q96JM4 1722 aa38.81■■■■□ 3.8
SDR39U1-209ENST00000554947 PLEKHD1A6NEE1 506 aa38.8■■■■□ 3.8
SDR39U1-209ENST00000554947 ATP1B4Q9UN42 357 aaPredicted RBP38.8■■■■□ 3.8
SDR39U1-209ENST00000554947 CFAP43Q8NDM7 1665 aa38.79■■■■□ 3.8
SDR39U1-209ENST00000554947 KCNH8Q96L42 1107 aa38.78■■■■□ 3.8
SDR39U1-209ENST00000554947 CCDC18Q5T9S5 1454 aa38.78■■■■□ 3.8
SDR39U1-209ENST00000554947 PPRC1Q5VV67 1664 aaKnown RBP38.74■■■■□ 3.79
SDR39U1-209ENST00000554947 CDK11AQ9UQ88 783 aaPredicted RBP38.72■■■■□ 3.79
SDR39U1-209ENST00000554947 ABCA9Q8IUA7 1624 aa38.71■■■■□ 3.79
SDR39U1-209ENST00000554947 CD109Q6YHK3 1445 aa38.65■■■■□ 3.78
SDR39U1-209ENST00000554947 TEX14Q8IWB6 1497 aa38.65■■■■□ 3.78
SDR39U1-209ENST00000554947 MAGI3Q5TCQ9 1506 aa38.63■■■■□ 3.78
SDR39U1-209ENST00000554947 VPS8Q8N3P4 1428 aa38.6■■■■□ 3.77
SDR39U1-209ENST00000554947 TROQ12816 1431 aaPredicted RBP38.59■■■■□ 3.77
SDR39U1-209ENST00000554947 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.53■■■■□ 3.76
SDR39U1-209ENST00000554947 KIF14Q15058 1648 aa38.5■■■■□ 3.75
SDR39U1-209ENST00000554947 KDM6BO15054 1643 aa38.47■■■■□ 3.75
SDR39U1-209ENST00000554947 TTC37Q6PGP7 1564 aa38.47■■■■□ 3.75
SDR39U1-209ENST00000554947 PHLDB1Q86UU1 1377 aa38.41■■■■□ 3.74
SDR39U1-209ENST00000554947 NEO1Q92859 1461 aa38.38■■■■□ 3.73
SDR39U1-209ENST00000554947 MYO5CQ9NQX4 1742 aa38.37■■■■□ 3.73
SDR39U1-209ENST00000554947 ARAP3Q8WWN8 1544 aa38.34■■■■□ 3.73
SDR39U1-209ENST00000554947 CFAP74Q9C0B2 1584 aa38.34■■■■□ 3.73
SDR39U1-209ENST00000554947 MAP3K1Q13233 1512 aa38.33■■■■□ 3.73
SDR39U1-209ENST00000554947 TIAM1Q13009 1591 aa38.33■■■■□ 3.73
SDR39U1-209ENST00000554947 PLCH2O75038 1416 aa38.33■■■■□ 3.73
SDR39U1-209ENST00000554947 MTUS2Q5JR59 1369 aa38.32■■■■□ 3.73
SDR39U1-209ENST00000554947 EHBP1L1Q8N3D4 1523 aa38.31■■■■□ 3.72
SDR39U1-209ENST00000554947 COL17A1Q9UMD9 1497 aaPredicted RBP38.28■■■■□ 3.72
SDR39U1-209ENST00000554947 FANCAO15360 1455 aa38.27■■■■□ 3.72
SDR39U1-209ENST00000554947 PREX2Q70Z35 1606 aa38.2■■■■□ 3.71
SDR39U1-209ENST00000554947 CDC42BPBQ9Y5S2 1711 aa38.2■■■■□ 3.71
SDR39U1-209ENST00000554947 AKNAQ7Z591 1439 aa38.2■■■■□ 3.71
SDR39U1-209ENST00000554947 CDC42BPAQ5VT25 1732 aa38.19■■■■□ 3.7
SDR39U1-209ENST00000554947 EFCAB2Q5VUJ9 269 aa38.17■■■■□ 3.7
SDR39U1-209ENST00000554947 LRRC9Q6ZRR7 1453 aa38.15■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms