RNA–Protein interactions for RNA: ENST00000554947.5

SDR39U1-209, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,203 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-209ENST00000554947 NISCHQ9Y2I1 1504 aa58.6■■■■■ 6.97
SDR39U1-209ENST00000554947 CCDC180Q9P1Z9 1646 aa52.11■■■■■ 5.93
SDR39U1-209ENST00000554947 ABCC9O60706 1549 aa50.59■■■■■ 5.69
SDR39U1-209ENST00000554947 NACADO15069 1562 aa48.91■■■■■ 5.42
SDR39U1-209ENST00000554947 RB1CC1Q8TDY2 1594 aa48.9■■■■■ 5.42
SDR39U1-209ENST00000554947 ZCCHC6Q5VYS8 1495 aaKnown RBP48.86■■■■■ 5.41
SDR39U1-209ENST00000554947 MYO15BQ96JP2 1530 aa48.75■■■■■ 5.39
SDR39U1-209ENST00000554947 DCAF8L2P0C7V8 631 aa48.69■■■■■ 5.38
SDR39U1-209ENST00000554947 DCAF1Q9Y4B6 1507 aa48.59■■■■■ 5.37
SDR39U1-209ENST00000554947 UNC13AQ9UPW8 1703 aa47.81■■■■■ 5.24
SDR39U1-209ENST00000554947 SCRIBQ14160 1630 aa47.4■■■■■ 5.18
SDR39U1-209ENST00000554947 BICRAQ9NZM4 1560 aa47.37■■■■■ 5.17
SDR39U1-209ENST00000554947 PABPN1Q86U42 306 aaKnown RBP eCLIP47.26■■■■■ 5.162e-8■□□□□ 11.2
SDR39U1-209ENST00000554947 SHROOM4Q9ULL8 1493 aa47.02■■■■■ 5.12
SDR39U1-209ENST00000554947 DNAJC5BQ9UF47 199 aa46.22■■■■■ 4.99
SDR39U1-209ENST00000554947 EIF4G1Q04637 1599 aaKnown RBP46.1■■■■■ 4.97
SDR39U1-209ENST00000554947 CC2D2AQ9P2K1 1620 aa45.85■■■■■ 4.93
SDR39U1-209ENST00000554947 CECR2Q9BXF3 1484 aa45.55■■■■■ 4.88
SDR39U1-209ENST00000554947 SMARCA4P51532 1647 aa45.44■■■■■ 4.86
SDR39U1-209ENST00000554947 BAZ1AQ9NRL2 1556 aaPredicted RBP45.43■■■■■ 4.86
SDR39U1-209ENST00000554947 SMARCA2P51531 1590 aa45.13■■■■■ 4.82
SDR39U1-209ENST00000554947 ATAD2BQ9ULI0 1458 aa45.11■■■■■ 4.81
SDR39U1-209ENST00000554947 MROH2BQ7Z745 1585 aa45.11■■■■■ 4.81
SDR39U1-209ENST00000554947 NCAPD3P42695 1498 aa45.1■■■■■ 4.81
SDR39U1-209ENST00000554947 PEG3Q9GZU2 1588 aa45.05■■■■■ 4.8
SDR39U1-209ENST00000554947 HMGXB3Q12766 1538 aa44.92■■■■■ 4.78
SDR39U1-209ENST00000554947 BAZ1BQ9UIG0 1483 aaKnown RBP44.75■■■■■ 4.75
SDR39U1-209ENST00000554947 RSF1Q96T23 1441 aaPredicted RBP44.68■■■■■ 4.74
SDR39U1-209ENST00000554947 WIZO95785 1651 aa44.65■■■■■ 4.74
SDR39U1-209ENST00000554947 TOP2AP11388 1531 aaKnown RBP44.23■■■■■ 4.67
SDR39U1-209ENST00000554947 LAMC3Q9Y6N6 1575 aa43.9■■■■■ 4.62
SDR39U1-209ENST00000554947 NESP48681 1621 aa43.84■■■■■ 4.61
SDR39U1-209ENST00000554947 CADPSQ9ULU8 1353 aa43.77■■■■■ 4.6
SDR39U1-209ENST00000554947 CCDC88BA6NC98 1476 aa43.66■■■■■ 4.58
SDR39U1-209ENST00000554947 ERCC6Q03468 1493 aa43.63■■■■■ 4.57
SDR39U1-209ENST00000554947 SUPT5HO00267 1087 aaKnown RBP43.57■■■■■ 4.57
SDR39U1-209ENST00000554947 CFTRP13569 1480 aa43.57■■■■■ 4.56
SDR39U1-209ENST00000554947 PDS5BQ9NTI5 1447 aa43.56■■■■■ 4.56
SDR39U1-209ENST00000554947 KIF21AQ7Z4S6 1674 aa43.42■■■■■ 4.54
SDR39U1-209ENST00000554947 PRDM2Q13029 1718 aa43.36■■■■■ 4.53
SDR39U1-209ENST00000554947 FANCD2Q9BXW9 1451 aa43.24■■■■■ 4.51
SDR39U1-209ENST00000554947 THOC2Q8NI27 1593 aaKnown RBP43.23■■■■■ 4.51
SDR39U1-209ENST00000554947 CUX2O14529 1486 aa43.19■■■■■ 4.51
SDR39U1-209ENST00000554947 CEP164Q9UPV0 1460 aa43.18■■■■■ 4.5
SDR39U1-209ENST00000554947 MRC2Q9UBG0 1479 aa43.08■■■■■ 4.49
SDR39U1-209ENST00000554947 WDR62O43379 1518 aa42.97■■■■■ 4.47
SDR39U1-209ENST00000554947 URB2Q14146 1524 aaKnown RBP42.78■■■■■ 4.44
SDR39U1-209ENST00000554947 ABCC8Q09428 1581 aa42.68■■■■■ 4.42
SDR39U1-209ENST00000554947 DNMBPQ6XZF7 1577 aa42.58■■■■■ 4.41
SDR39U1-209ENST00000554947 TOPBP1Q92547 1522 aa42.58■■■■■ 4.41
SDR39U1-209ENST00000554947 CUX1P39880 1505 aa42.32■■■■■ 4.37
SDR39U1-209ENST00000554947 IFT140Q96RY7 1462 aa42.3■■■■■ 4.36
SDR39U1-209ENST00000554947 POLA1P09884 1462 aaPredicted RBP42.23■■■■■ 4.35
SDR39U1-209ENST00000554947 FGD5Q6ZNL6 1462 aa42.14■■■■■ 4.34
SDR39U1-209ENST00000554947 TARBP1Q13395 1621 aaKnown RBP42.13■■■■■ 4.34
SDR39U1-209ENST00000554947 WRNQ14191 1432 aaPredicted RBP eCLIP42.12■■■■■ 4.33
SDR39U1-209ENST00000554947 BIVM-ERCC5R4GMW8 1640 aa42.08■■■■■ 4.33
SDR39U1-209ENST00000554947 TOP2BQ02880 1626 aa42.07■■■■■ 4.33
SDR39U1-209ENST00000554947 SOGA1O94964 1423 aa42.04■■■■■ 4.32
SDR39U1-209ENST00000554947 SYNJ1O43426 1573 aa42■■■■■ 4.31
SDR39U1-209ENST00000554947 ZNF608Q9ULD9 1512 aaPredicted RBP42■■■■■ 4.31
SDR39U1-209ENST00000554947 RAD54L2Q9Y4B4 1467 aa41.98■■■■■ 4.31
SDR39U1-209ENST00000554947 WDR97A6NE52 1622 aa41.92■■■■■ 4.3
SDR39U1-209ENST00000554947 EIF4G3O43432 1585 aaKnown RBP41.9■■■■■ 4.3
SDR39U1-209ENST00000554947 ABCA10Q8WWZ4 1543 aa41.8■■■■■ 4.28
SDR39U1-209ENST00000554947 AQRO60306 1485 aaKnown RBP eCLIP41.79■■■■■ 4.28
SDR39U1-209ENST00000554947 TDRD9Q8NDG6 1382 aaKnown RBP41.73■■■■■ 4.27
SDR39U1-209ENST00000554947 ABCA5Q8WWZ7 1642 aa41.62■■■■■ 4.25
SDR39U1-209ENST00000554947 GAPVD1Q14C86 1478 aa41.59■■■■■ 4.25
SDR39U1-209ENST00000554947 GRIN2BQ13224 1484 aa41.57■■■■■ 4.25
SDR39U1-209ENST00000554947 DNAJC5Q9H3Z4 198 aa41.56■■■■■ 4.24
SDR39U1-209ENST00000554947 PBRM1Q86U86 1689 aa41.53■■■■■ 4.24
SDR39U1-209ENST00000554947 MAGI1Q96QZ7 1491 aaPredicted RBP41.47■■■■■ 4.23
SDR39U1-209ENST00000554947 SNAPC4Q5SXM2 1469 aa41.43■■■■■ 4.22
SDR39U1-209ENST00000554947 OSCARQ8IYS5 282 aa41.38■■■■■ 4.21
SDR39U1-209ENST00000554947 CHD1O14646 1710 aa41.36■■■■■ 4.21
SDR39U1-209ENST00000554947 ERICH3Q5RHP9 1530 aa41.33■■■■■ 4.21
SDR39U1-209ENST00000554947 SYNJ2O15056 1496 aa41.28■■■■■ 4.2
SDR39U1-209ENST00000554947 KIF27Q86VH2 1401 aa41.26■■■■■ 4.19
SDR39U1-209ENST00000554947 TRIM41Q8WV44 630 aa41.21■■■■■ 4.19
SDR39U1-209ENST00000554947 FBLN2P98095 1184 aa41.19■■■■■ 4.18
SDR39U1-209ENST00000554947 CHMP7Q8WUX9 453 aaPredicted RBP41.19■■■■■ 4.18
SDR39U1-209ENST00000554947 ADAMTS12P58397 1594 aa41.19■■■■■ 4.18
SDR39U1-209ENST00000554947 FHAD1B1AJZ9 1412 aa41.13■■■■■ 4.17
SDR39U1-209ENST00000554947 IGF1RP08069 1367 aa41.04■■■■■ 4.16
SDR39U1-209ENST00000554947 GRIN2AQ12879 1464 aa41.02■■■■■ 4.16
SDR39U1-209ENST00000554947 CUL7Q14999 1698 aa41.01■■■■■ 4.15
SDR39U1-209ENST00000554947 CLASP1Q7Z460 1538 aa40.92■■■■■ 4.14
SDR39U1-209ENST00000554947 NUP160Q12769 1436 aa40.85■■■■■ 4.13
SDR39U1-209ENST00000554947 CHIC1Q5VXU3 224 aa40.85■■■■■ 4.13
SDR39U1-209ENST00000554947 RUSC2Q8N2Y8 1516 aa40.84■■■■■ 4.13
SDR39U1-209ENST00000554947 CARMIL1Q5VZK9 1371 aa40.8■■■■■ 4.12
SDR39U1-209ENST00000554947 CEP170Q5SW79 1584 aa40.79■■■■■ 4.12
SDR39U1-209ENST00000554947 ARHGEF11O15085 1522 aa40.7■■■■■ 4.11
SDR39U1-209ENST00000554947 RIMBP3CA6NJZ7 1639 aa40.7■■■■■ 4.11
SDR39U1-209ENST00000554947 RIMBP3BA6NNM3 1639 aa40.7■■■■■ 4.11
SDR39U1-209ENST00000554947 RIMBP3Q9UFD9 1639 aa40.7■■■■■ 4.11
SDR39U1-209ENST00000554947 EEA1Q15075 1411 aa40.66■■■■■ 4.1
SDR39U1-209ENST00000554947 RAPGEF2Q9Y4G8 1499 aa40.6■■■■■ 4.09
SDR39U1-209ENST00000554947 SHROOM2Q13796 1616 aa40.56■■■■■ 4.08
Retrieved 100 of 20,778 RNA–protein pairs in 265.7 ms