RNA–Protein interactions for RNA: ENST00000553409.5

NRDE2-202, Transcript of NRDE-2, necessary for RNA interference, domain containing, humanhuman

TSL 1 (best)

Gene NRDE2, Length 3,434 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRDE2-202ENST00000553409 SETD5Q9C0A6 1442 aa15.96■□□□□ 0.15
NRDE2-202ENST00000553409 FANCIQ9NVI1 1328 aa15.95■□□□□ 0.14
NRDE2-202ENST00000553409 ARHGAP35Q9NRY4 1499 aa15.93■□□□□ 0.14
NRDE2-202ENST00000553409 BICRAQ9NZM4 1560 aa15.93■□□□□ 0.14
NRDE2-202ENST00000553409 ATAD2BQ9ULI0 1458 aa15.92■□□□□ 0.14
NRDE2-202ENST00000553409 IRX6P78412 446 aaPredicted RBP15.91■□□□□ 0.14
NRDE2-202ENST00000553409 ERICH6Q7L0X2 663 aa15.91■□□□□ 0.14
NRDE2-202ENST00000553409 CDK11AQ9UQ88 783 aaPredicted RBP15.91■□□□□ 0.14
NRDE2-202ENST00000553409 TIMELESSQ9UNS1 1208 aa15.88■□□□□ 0.13
NRDE2-202ENST00000553409 FAM50AQ14320 339 aaKnown RBP15.87■□□□□ 0.13
NRDE2-202ENST00000553409 BIVM-ERCC5R4GMW8 1640 aa15.87■□□□□ 0.13
NRDE2-202ENST00000553409 PHLDB1Q86UU1 1377 aa15.85■□□□□ 0.13
NRDE2-202ENST00000553409 HNRNPUQ00839 825 aaKnown RBP eCLIP15.85■□□□□ 0.13
NRDE2-202ENST00000553409 KIF27Q86VH2 1401 aa15.84■□□□□ 0.13
NRDE2-202ENST00000553409 TIAM1Q13009 1591 aa15.8■□□□□ 0.12
NRDE2-202ENST00000553409 LRRC9Q6ZRR7 1453 aa15.79■□□□□ 0.12
NRDE2-202ENST00000553409 CUX1P39880 1505 aa15.77■□□□□ 0.11
NRDE2-202ENST00000553409 DEKP35659 375 aaKnown RBP15.77■□□□□ 0.11
NRDE2-202ENST00000553409 MAP3K1Q13233 1512 aa15.76■□□□□ 0.11
NRDE2-202ENST00000553409 TONSLQ96HA7 1378 aa15.75■□□□□ 0.11
NRDE2-202ENST00000553409 MYT1LQ9UL68 1186 aa15.74■□□□□ 0.11
NRDE2-202ENST00000553409 PPP4R2Q9NY27 417 aa15.74■□□□□ 0.11
NRDE2-202ENST00000553409 ERICH6BQ5W0A0 696 aa15.71■□□□□ 0.11
NRDE2-202ENST00000553409 ATP1B4Q9UN42 357 aaPredicted RBP15.69■□□□□ 0.1
NRDE2-202ENST00000553409 B4GALNT3Q6L9W6 998 aa15.69■□□□□ 0.1
NRDE2-202ENST00000553409 P3H3Q8IVL6 736 aa15.67■□□□□ 0.1
NRDE2-202ENST00000553409 IGF1RP08069 1367 aa15.67■□□□□ 0.1
NRDE2-202ENST00000553409 CCDC184Q52MB2 194 aa15.66■□□□□ 0.1
NRDE2-202ENST00000553409 PRKCSHP14314 528 aaPredicted RBP15.65■□□□□ 0.1
NRDE2-202ENST00000553409 NBR1Q14596 966 aa15.64■□□□□ 0.09
NRDE2-202ENST00000553409 WASHC2AQ641Q2 1341 aa15.64■□□□□ 0.09
NRDE2-202ENST00000553409 NOP58Q9Y2X3 529 aaKnown RBP15.64■□□□□ 0.09
NRDE2-202ENST00000553409 PAK3O75914 559 aaPredicted RBP15.63■□□□□ 0.09
NRDE2-202ENST00000553409 FHAD1B1AJZ9 1412 aa15.62■□□□□ 0.09
NRDE2-202ENST00000553409 CARMIL1Q5VZK9 1371 aa15.61■□□□□ 0.09
NRDE2-202ENST00000553409 HSPA5P11021 654 aaKnown RBP15.6■□□□□ 0.09
NRDE2-202ENST00000553409 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.59■□□□□ 0.09
NRDE2-202ENST00000553409 CCDC18Q5T9S5 1454 aa15.59■□□□□ 0.09
NRDE2-202ENST00000553409 FAM9BQ8IZU0 186 aa15.59■□□□□ 0.09
NRDE2-202ENST00000553409 PCF11O94913 1555 aaKnown RBP15.58■□□□□ 0.09
NRDE2-202ENST00000553409 UACAQ9BZF9 1416 aa15.58■□□□□ 0.08
NRDE2-202ENST00000553409 CFAP43Q8NDM7 1665 aa15.57■□□□□ 0.08
NRDE2-202ENST00000553409 KDM5BQ9UGL1 1544 aa15.56■□□□□ 0.08
NRDE2-202ENST00000553409 PTPRKQ15262 1439 aa15.55■□□□□ 0.08
NRDE2-202ENST00000553409 ZBED9Q6R2W3 1325 aa15.54■□□□□ 0.08
NRDE2-202ENST00000553409 HFM1A2PYH4 1435 aa15.53■□□□□ 0.08
NRDE2-202ENST00000553409 FHOD3Q2V2M9 1422 aa15.53■□□□□ 0.08
NRDE2-202ENST00000553409 FGD6Q6ZV73 1430 aa15.53■□□□□ 0.08
NRDE2-202ENST00000553409 PRKRIP1Q9H875 184 aaPredicted RBP15.53■□□□□ 0.08
NRDE2-202ENST00000553409 MRS2Q9HD23 443 aa15.53■□□□□ 0.08
NRDE2-202ENST00000553409 AQRO60306 1485 aaKnown RBP eCLIP15.53■□□□□ 0.085e-6■■■□□ 16.9
NRDE2-202ENST00000553409 CFTRP13569 1480 aa15.52■□□□□ 0.08
NRDE2-202ENST00000553409 EIF4G2P78344 907 aaKnown RBP eCLIP15.51■□□□□ 0.07
NRDE2-202ENST00000553409 CNTLNQ9NXG0 1405 aa15.51■□□□□ 0.07
NRDE2-202ENST00000553409 C11orf95C9JLR9 678 aaPredicted RBP15.51■□□□□ 0.07
NRDE2-202ENST00000553409 ANO8Q9HCE9 1232 aaPredicted RBP15.51■□□□□ 0.07
NRDE2-202ENST00000553409 NAIPQ13075 1403 aa15.49■□□□□ 0.07
NRDE2-202ENST00000553409 NCOA2Q15596 1464 aa15.49■□□□□ 0.07
NRDE2-202ENST00000553409 PTPN23Q9H3S7 1636 aa15.49■□□□□ 0.07
NRDE2-202ENST00000553409 FYCO1Q9BQS8 1478 aa15.48■□□□□ 0.07
NRDE2-202ENST00000553409 IPO9Q96P70 1041 aaKnown RBP15.47■□□□□ 0.07
NRDE2-202ENST00000553409 CASKIN1Q8WXD9 1431 aa15.47■□□□□ 0.07
NRDE2-202ENST00000553409 NCAPD3P42695 1498 aa15.47■□□□□ 0.07
NRDE2-202ENST00000553409 FGD5Q6ZNL6 1462 aa15.46■□□□□ 0.07
NRDE2-202ENST00000553409 ANP32AP39687 249 aaKnown RBP15.46■□□□□ 0.06
NRDE2-202ENST00000553409 RTL5Q5HYW3 569 aaPredicted RBP15.45■□□□□ 0.06
NRDE2-202ENST00000553409 CCDC7Q96M83 1385 aa15.44■□□□□ 0.06
NRDE2-202ENST00000553409 AKNAQ7Z591 1439 aa15.44■□□□□ 0.06
NRDE2-202ENST00000553409 HMGXB3Q12766 1538 aa15.43■□□□□ 0.06
NRDE2-202ENST00000553409 ZBTB47Q9UFB7 747 aaPredicted RBP15.43■□□□□ 0.06
NRDE2-202ENST00000553409 CCDC136Q96JN2 1154 aa15.43■□□□□ 0.06
NRDE2-202ENST00000553409 MTUS2Q5JR59 1369 aa15.43■□□□□ 0.06
NRDE2-202ENST00000553409 FMN1Q68DA7 1419 aa15.43■□□□□ 0.06
NRDE2-202ENST00000553409 RRP7BPQ9NSQ0 103 aa15.42■□□□□ 0.06
NRDE2-202ENST00000553409 NCOA1Q15788 1441 aa15.41■□□□□ 0.06
NRDE2-202ENST00000553409 SALL2Q9Y467 1007 aaPredicted RBP15.41■□□□□ 0.06
NRDE2-202ENST00000553409 L3MBTL2Q969R5 705 aa15.41■□□□□ 0.06
NRDE2-202ENST00000553409 IL27Q8NEV9 243 aa15.39■□□□□ 0.05
NRDE2-202ENST00000553409 CHIC2Q9UKJ5 165 aa15.39■□□□□ 0.05
NRDE2-202ENST00000553409 SMG6Q86US8 1419 aaKnown RBP15.38■□□□□ 0.05
NRDE2-202ENST00000553409 DENND4BO75064 1496 aaPredicted RBP15.38■□□□□ 0.05
NRDE2-202ENST00000553409 NUDCQ9Y266 331 aa15.37■□□□□ 0.05
NRDE2-202ENST00000553409 RNF123Q5XPI4 1314 aa15.37■□□□□ 0.05
NRDE2-202ENST00000553409 MYOM3Q5VTT5 1437 aa15.36■□□□□ 0.05
NRDE2-202ENST00000553409 SENP3-EIF4A1A0A087X0R7 540 aa15.36■□□□□ 0.05
NRDE2-202ENST00000553409 CNGB1Q14028 1251 aaPredicted RBP15.36■□□□□ 0.05
NRDE2-202ENST00000553409 FOXD1Q16676 465 aa15.36■□□□□ 0.05
NRDE2-202ENST00000553409 EFCAB5A4FU69 1503 aa15.35■□□□□ 0.05
NRDE2-202ENST00000553409 KIF7Q2M1P5 1343 aa15.35■□□□□ 0.05
NRDE2-202ENST00000553409 NBPF8Q3BBV2 869 aa15.34■□□□□ 0.05
NRDE2-202ENST00000553409 RTN4Q9NQC3 1192 aaKnown RBP15.34■□□□□ 0.05
NRDE2-202ENST00000553409 SNAPC4Q5SXM2 1469 aa15.33■□□□□ 0.05
NRDE2-202ENST00000553409 MPHOSPH9Q99550 1183 aa15.33■□□□□ 0.04
NRDE2-202ENST00000553409 NPM2Q86SE8 214 aaKnown RBP15.31■□□□□ 0.04
NRDE2-202ENST00000553409 LAS1LQ9Y4W2 734 aaKnown RBP15.28■□□□□ 0.04
NRDE2-202ENST00000553409 SPATA31E1Q6ZUB1 1445 aa15.27■□□□□ 0.04
NRDE2-202ENST00000553409 CADPSQ9ULU8 1353 aa15.27■□□□□ 0.04
NRDE2-202ENST00000553409 KDM6BO15054 1643 aa15.26■□□□□ 0.03
NRDE2-202ENST00000553409 NEFMP07197 916 aa15.26■□□□□ 0.03
NRDE2-202ENST00000553409 HECW1Q76N89 1606 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms