RNA–Protein interactions for RNA: ENST00000553409.5

NRDE2-202, Transcript of NRDE-2, necessary for RNA interference, domain containing, humanhuman

TSL 1 (best)

Gene NRDE2, Length 3,434 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRDE2-202ENST00000553409 NISCHQ9Y2I1 1504 aa21.76■■□□□ 1.07
NRDE2-202ENST00000553409 SHROOM4Q9ULL8 1493 aa19.22■□□□□ 0.67
NRDE2-202ENST00000553409 HRCP23327 699 aa19.21■□□□□ 0.66
NRDE2-202ENST00000553409 SUPT5HO00267 1087 aaKnown RBP19.13■□□□□ 0.65
NRDE2-202ENST00000553409 PCGF6Q9BYE7 350 aa18.88■□□□□ 0.61
NRDE2-202ENST00000553409 MYO15BQ96JP2 1530 aa18.88■□□□□ 0.61
NRDE2-202ENST00000553409 PPARGC1BQ86YN6 1023 aaKnown RBP18.84■□□□□ 0.61
NRDE2-202ENST00000553409 CHIC1Q5VXU3 224 aa18.8■□□□□ 0.6
NRDE2-202ENST00000553409 ZCCHC6Q5VYS8 1495 aaKnown RBP18.5■□□□□ 0.55
NRDE2-202ENST00000553409 DCAF1Q9Y4B6 1507 aa18.42■□□□□ 0.54
NRDE2-202ENST00000553409 LOC105371045A0A1W2PR82 267 aa18.37■□□□□ 0.53
NRDE2-202ENST00000553409 PELP1Q8IZL8 1130 aaKnown RBP18.3■□□□□ 0.52
NRDE2-202ENST00000553409 TRIM26Q12899 539 aaPredicted RBP18.28■□□□□ 0.52
NRDE2-202ENST00000553409 DCAF8L2P0C7V8 631 aa18.17■□□□□ 0.5
NRDE2-202ENST00000553409 CCDC180Q9P1Z9 1646 aa18.14■□□□□ 0.5
NRDE2-202ENST00000553409 SCAF1Q9H7N4 1312 aaKnown RBP18.11■□□□□ 0.49
NRDE2-202ENST00000553409 ZEB1P37275 1124 aaPredicted RBP18.07■□□□□ 0.48
NRDE2-202ENST00000553409 ACIN1Q9UKV3 1341 aaKnown RBP17.7■□□□□ 0.42
NRDE2-202ENST00000553409 FAM9AQ8IZU1 332 aaPredicted RBP17.69■□□□□ 0.42
NRDE2-202ENST00000553409 TRIM41Q8WV44 630 aa17.69■□□□□ 0.42
NRDE2-202ENST00000553409 NEUROD1Q13562 356 aa17.67■□□□□ 0.42
NRDE2-202ENST00000553409 EHMT2Q96KQ7 1210 aa17.62■□□□□ 0.41
NRDE2-202ENST00000553409 GTF3C3Q9Y5Q9 886 aa17.55■□□□□ 0.4
NRDE2-202ENST00000553409 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.54■□□□□ 0.4
NRDE2-202ENST00000553409 ABCC9O60706 1549 aa17.54■□□□□ 0.4
NRDE2-202ENST00000553409 MYT1Q01538 1121 aa17.53■□□□□ 0.4
NRDE2-202ENST00000553409 RSF1Q96T23 1441 aaPredicted RBP17.51■□□□□ 0.39
NRDE2-202ENST00000553409 CCER1Q8TC90 406 aaPredicted RBP17.48■□□□□ 0.39
NRDE2-202ENST00000553409 CENPBP07199 599 aaPredicted RBP17.46■□□□□ 0.38
NRDE2-202ENST00000553409 DIEXFQ68CQ4 756 aaKnown RBP17.45■□□□□ 0.38
NRDE2-202ENST00000553409 RB1CC1Q8TDY2 1594 aa17.39■□□□□ 0.38
NRDE2-202ENST00000553409 SCRIBQ14160 1630 aa17.23■□□□□ 0.35
NRDE2-202ENST00000553409 TTBK1Q5TCY1 1321 aaPredicted RBP17.18■□□□□ 0.34
NRDE2-202ENST00000553409 YTHDC1Q96MU7 727 aaKnown RBP17.16■□□□□ 0.34
NRDE2-202ENST00000553409 ZNF316A6NFI3 1004 aaPredicted RBP17.14■□□□□ 0.33
NRDE2-202ENST00000553409 CECR2Q9BXF3 1484 aa17.05■□□□□ 0.32
NRDE2-202ENST00000553409 MIER1Q8N108 512 aa17.03■□□□□ 0.32
NRDE2-202ENST00000553409 WRNQ14191 1432 aaPredicted RBP eCLIP17.03■□□□□ 0.32
NRDE2-202ENST00000553409 MROH2BQ7Z745 1585 aa17.01■□□□□ 0.31
NRDE2-202ENST00000553409 CEP162Q5TB80 1403 aa16.95■□□□□ 0.3
NRDE2-202ENST00000553409 WIZO95785 1651 aa16.93■□□□□ 0.3
NRDE2-202ENST00000553409 EIF4G1Q04637 1599 aaKnown RBP16.86■□□□□ 0.29
NRDE2-202ENST00000553409 CCDC88BA6NC98 1476 aa16.86■□□□□ 0.29
NRDE2-202ENST00000553409 TNIKQ9UKE5 1360 aa16.85■□□□□ 0.29
NRDE2-202ENST00000553409 HNRNPUL2Q1KMD3 747 aaKnown RBP16.82■□□□□ 0.28
NRDE2-202ENST00000553409 ABCC8Q09428 1581 aa16.81■□□□□ 0.28
NRDE2-202ENST00000553409 SOGA1O94964 1423 aa16.81■□□□□ 0.28
NRDE2-202ENST00000553409 UBTFP17480 764 aaKnown RBP16.8■□□□□ 0.28
NRDE2-202ENST00000553409 BAZ1AQ9NRL2 1556 aaPredicted RBP16.78■□□□□ 0.28
NRDE2-202ENST00000553409 CSRNP3Q8WYN3 585 aa16.75■□□□□ 0.27
NRDE2-202ENST00000553409 SUPT16HQ9Y5B9 1047 aaKnown RBP16.73■□□□□ 0.27
NRDE2-202ENST00000553409 RUSC2Q8N2Y8 1516 aa16.71■□□□□ 0.27
NRDE2-202ENST00000553409 NACADO15069 1562 aa16.66■□□□□ 0.26
NRDE2-202ENST00000553409 CLSPNQ9HAW4 1339 aa16.65■□□□□ 0.26
NRDE2-202ENST00000553409 EEA1Q15075 1411 aa16.65■□□□□ 0.26
NRDE2-202ENST00000553409 TSHZ2Q9NRE2 1034 aa16.64■□□□□ 0.25
NRDE2-202ENST00000553409 GOLGA3Q08378 1498 aa16.63■□□□□ 0.25
NRDE2-202ENST00000553409 ANP32EQ9BTT0 268 aa16.6■□□□□ 0.25
NRDE2-202ENST00000553409 TOP2AP11388 1531 aaKnown RBP16.59■□□□□ 0.25
NRDE2-202ENST00000553409 SMARCA2P51531 1590 aa16.55■□□□□ 0.24
NRDE2-202ENST00000553409 CLIP1P30622 1438 aa16.51■□□□□ 0.23
NRDE2-202ENST00000553409 APLP2Q06481 763 aa16.51■□□□□ 0.23
NRDE2-202ENST00000553409 BCL11AQ9H165 835 aa16.49■□□□□ 0.23
NRDE2-202ENST00000553409 VPS8Q8N3P4 1428 aa16.49■□□□□ 0.23
NRDE2-202ENST00000553409 DHX57Q6P158 1386 aaKnown RBP16.47■□□□□ 0.23
NRDE2-202ENST00000553409 CEP164Q9UPV0 1460 aa16.46■□□□□ 0.23
NRDE2-202ENST00000553409 RANGAP1P46060 587 aaPredicted RBP16.43■□□□□ 0.22
NRDE2-202ENST00000553409 SMARCA4P51532 1647 aa16.42■□□□□ 0.22
NRDE2-202ENST00000553409 KCNH8Q96L42 1107 aa16.41■□□□□ 0.22
NRDE2-202ENST00000553409 BCANQ96GW7 911 aa16.39■□□□□ 0.22
NRDE2-202ENST00000553409 KIF21BO75037 1637 aa16.38■□□□□ 0.21
NRDE2-202ENST00000553409 RAPGEF2Q9Y4G8 1499 aa16.34■□□□□ 0.21
NRDE2-202ENST00000553409 FKBP8Q14318 412 aa16.32■□□□□ 0.2
NRDE2-202ENST00000553409 BAZ1BQ9UIG0 1483 aaKnown RBP16.3■□□□□ 0.2
NRDE2-202ENST00000553409 SYNJ1O43426 1573 aa16.3■□□□□ 0.2
NRDE2-202ENST00000553409 KANK4Q5T7N3 995 aaPredicted RBP16.28■□□□□ 0.2
NRDE2-202ENST00000553409 RBM19Q9Y4C8 960 aaKnown RBP16.26■□□□□ 0.19
NRDE2-202ENST00000553409 RRBP1Q9P2E9 1410 aaKnown RBP16.18■□□□□ 0.18
NRDE2-202ENST00000553409 DDX10Q13206 875 aaKnown RBP16.18■□□□□ 0.18
NRDE2-202ENST00000553409 ITGAEP38570 1179 aa16.17■□□□□ 0.18
NRDE2-202ENST00000553409 ARAP1Q96P48 1450 aa16.16■□□□□ 0.18
NRDE2-202ENST00000553409 NEFLP07196 543 aa16.15■□□□□ 0.18
NRDE2-202ENST00000553409 CUX2O14529 1486 aa16.15■□□□□ 0.18
NRDE2-202ENST00000553409 CCNB3Q8WWL7 1395 aa16.12■□□□□ 0.17
NRDE2-202ENST00000553409 MSH5O43196 834 aa16.11■□□□□ 0.17
NRDE2-202ENST00000553409 TRIM52Q96A61 297 aa16.11■□□□□ 0.17
NRDE2-202ENST00000553409 RAB3GAP2Q9H2M9 1393 aa16.09■□□□□ 0.17
NRDE2-202ENST00000553409 MAPKBP1O60336 1514 aa16.08■□□□□ 0.16
NRDE2-202ENST00000553409 UNC13AQ9UPW8 1703 aa16.08■□□□□ 0.16
NRDE2-202ENST00000553409 PPP1R15AO75807 674 aaPredicted RBP16.07■□□□□ 0.16
NRDE2-202ENST00000553409 SIN3AQ96ST3 1273 aa16.05■□□□□ 0.16
NRDE2-202ENST00000553409 PRXQ9BXM0 1461 aa16.05■□□□□ 0.16
NRDE2-202ENST00000553409 PABPN1Q86U42 306 aaKnown RBP eCLIP16.04■□□□□ 0.16
NRDE2-202ENST00000553409 HIRIP3Q9BW71 556 aaPredicted RBP16.03■□□□□ 0.16
NRDE2-202ENST00000553409 WDR97A6NE52 1622 aa16.03■□□□□ 0.16
NRDE2-202ENST00000553409 ERICH3Q5RHP9 1530 aa16.02■□□□□ 0.15
NRDE2-202ENST00000553409 CCER2I3L3R5 266 aa16.01■□□□□ 0.15
NRDE2-202ENST00000553409 PEG3Q9GZU2 1588 aa16.01■□□□□ 0.15
NRDE2-202ENST00000553409 ANP32CO43423 234 aa15.99■□□□□ 0.15
NRDE2-202ENST00000553409 TOP2BQ02880 1626 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms