RNA–Protein interactions for RNA: ENST00000553020.5

CNOT2-242, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-242ENST00000553020 CLASP1Q7Z460 1538 aa15.84■□□□□ 0.13
CNOT2-242ENST00000553020 CLIP1P30622 1438 aa15.82■□□□□ 0.12
CNOT2-242ENST00000553020 RAPGEF2Q9Y4G8 1499 aa15.79■□□□□ 0.12
CNOT2-242ENST00000553020 KDM6BO15054 1643 aa15.79■□□□□ 0.12
CNOT2-242ENST00000553020 DNMBPQ6XZF7 1577 aa15.79■□□□□ 0.12
CNOT2-242ENST00000553020 ZEB1P37275 1124 aaPredicted RBP15.78■□□□□ 0.12
CNOT2-242ENST00000553020 FGD5Q6ZNL6 1462 aa15.77■□□□□ 0.11
CNOT2-242ENST00000553020 PRXQ9BXM0 1461 aa15.77■□□□□ 0.11
CNOT2-242ENST00000553020 APLP2Q06481 763 aa15.75■□□□□ 0.11
CNOT2-242ENST00000553020 SPATA31D1Q6ZQQ2 1576 aa15.75■□□□□ 0.11
CNOT2-242ENST00000553020 VPS8Q8N3P4 1428 aa15.73■□□□□ 0.11
CNOT2-242ENST00000553020 AQRO60306 1485 aaKnown RBP eCLIP15.72■□□□□ 0.11
CNOT2-242ENST00000553020 TOPBP1Q92547 1522 aa15.68■□□□□ 0.1
CNOT2-242ENST00000553020 FAM69CQ0P6D2 419 aa15.67■□□□□ 0.1
CNOT2-242ENST00000553020 ABCA10Q8WWZ4 1543 aa15.63■□□□□ 0.09
CNOT2-242ENST00000553020 PPARGC1BQ86YN6 1023 aaKnown RBP15.63■□□□□ 0.09
CNOT2-242ENST00000553020 CUL7Q14999 1698 aa15.61■□□□□ 0.09
CNOT2-242ENST00000553020 POLA1P09884 1462 aaPredicted RBP15.61■□□□□ 0.09
CNOT2-242ENST00000553020 CARMIL1Q5VZK9 1371 aa15.61■□□□□ 0.09
CNOT2-242ENST00000553020 RANGAP1P46060 587 aaPredicted RBP15.58■□□□□ 0.08
CNOT2-242ENST00000553020 CHMP7Q8WUX9 453 aaPredicted RBP15.58■□□□□ 0.08
CNOT2-242ENST00000553020 IGF1RP08069 1367 aa15.57■□□□□ 0.08
CNOT2-242ENST00000553020 ABCC10Q5T3U5 1492 aa15.57■□□□□ 0.08
CNOT2-242ENST00000553020 TTBK1Q5TCY1 1321 aaPredicted RBP15.54■□□□□ 0.08
CNOT2-242ENST00000553020 WDR97A6NE52 1622 aa15.52■□□□□ 0.08
CNOT2-242ENST00000553020 RAD54L2Q9Y4B4 1467 aa15.52■□□□□ 0.07
CNOT2-242ENST00000553020 SNAPC4Q5SXM2 1469 aa15.51■□□□□ 0.07
CNOT2-242ENST00000553020 CERKQ8TCT0 537 aa15.49■□□□□ 0.07
CNOT2-242ENST00000553020 TARBP1Q13395 1621 aaKnown RBP15.49■□□□□ 0.07
CNOT2-242ENST00000553020 DIP2BQ9P265 1576 aa15.48■□□□□ 0.07
CNOT2-242ENST00000553020 TSPOAP1O95153 1857 aa15.48■□□□□ 0.07
CNOT2-242ENST00000553020 ARHGAP35Q9NRY4 1499 aa15.47■□□□□ 0.07
CNOT2-242ENST00000553020 ABCA5Q8WWZ7 1642 aa15.47■□□□□ 0.07
CNOT2-242ENST00000553020 FHAD1B1AJZ9 1412 aa15.47■□□□□ 0.07
CNOT2-242ENST00000553020 EFCAB5A4FU69 1503 aa15.47■□□□□ 0.07
CNOT2-242ENST00000553020 CCER1Q8TC90 406 aaPredicted RBP15.46■□□□□ 0.07
CNOT2-242ENST00000553020 CTTNBP2Q8WZ74 1663 aa15.44■□□□□ 0.06
CNOT2-242ENST00000553020 MAP3K1Q13233 1512 aa15.39■□□□□ 0.05
CNOT2-242ENST00000553020 TDRD9Q8NDG6 1382 aaKnown RBP15.38■□□□□ 0.05
CNOT2-242ENST00000553020 MAGI1Q96QZ7 1491 aaPredicted RBP15.37■□□□□ 0.05
CNOT2-242ENST00000553020 PBRM1Q86U86 1689 aa15.35■□□□□ 0.05
CNOT2-242ENST00000553020 MAPKBP1O60336 1514 aa15.34■□□□□ 0.05
CNOT2-242ENST00000553020 FMN1Q68DA7 1419 aa15.34■□□□□ 0.05
CNOT2-242ENST00000553020 TIAM1Q13009 1591 aa15.33■□□□□ 0.05
CNOT2-242ENST00000553020 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.33■□□□□ 0.04
CNOT2-242ENST00000553020 FYCO1Q9BQS8 1478 aa15.33■□□□□ 0.04
CNOT2-242ENST00000553020 NPM1P06748 294 aaKnown RBP eCLIP15.32■□□□□ 0.04
CNOT2-242ENST00000553020 GRIN2BQ13224 1484 aa15.31■□□□□ 0.04
CNOT2-242ENST00000553020 CFAP43Q8NDM7 1665 aa15.31■□□□□ 0.04
CNOT2-242ENST00000553020 PCF11O94913 1555 aaKnown RBP15.3■□□□□ 0.04
CNOT2-242ENST00000553020 ADAMTS12P58397 1594 aa15.28■□□□□ 0.04
CNOT2-242ENST00000553020 CEP170Q5SW79 1584 aa15.28■□□□□ 0.04
CNOT2-242ENST00000553020 HNRNPUL2Q1KMD3 747 aaKnown RBP15.28■□□□□ 0.04
CNOT2-242ENST00000553020 FHOD3Q2V2M9 1422 aa15.27■□□□□ 0.04
CNOT2-242ENST00000553020 RRBP1Q9P2E9 1410 aaKnown RBP15.26■□□□□ 0.03
CNOT2-242ENST00000553020 CASKIN1Q8WXD9 1431 aa15.26■□□□□ 0.03
CNOT2-242ENST00000553020 CCNB3Q8WWL7 1395 aa15.24■□□□□ 0.03
CNOT2-242ENST00000553020 SAMD9Q5K651 1589 aa15.24■□□□□ 0.03
CNOT2-242ENST00000553020 LRRC9Q6ZRR7 1453 aa15.23■□□□□ 0.03
CNOT2-242ENST00000553020 ATP1B4Q9UN42 357 aaPredicted RBP15.22■□□□□ 0.03
CNOT2-242ENST00000553020 IQGAP2Q13576 1575 aa15.21■□□□□ 0.03
CNOT2-242ENST00000553020 KANK4Q5T7N3 995 aaPredicted RBP15.21■□□□□ 0.03
CNOT2-242ENST00000553020 P3H3Q8IVL6 736 aa15.21■□□□□ 0.03
CNOT2-242ENST00000553020 COL17A1Q9UMD9 1497 aaPredicted RBP15.2■□□□□ 0.02
CNOT2-242ENST00000553020 CCDC18Q5T9S5 1454 aa15.16■□□□□ 0.02
CNOT2-242ENST00000553020 CLSPNQ9HAW4 1339 aa15.16■□□□□ 0.02
CNOT2-242ENST00000553020 HECW1Q76N89 1606 aa15.15■□□□□ 0.02
CNOT2-242ENST00000553020 MTUS2Q5JR59 1369 aa15.14■□□□□ 0.01
CNOT2-242ENST00000553020 PPRC1Q5VV67 1664 aaKnown RBP15.13■□□□□ 0.01
CNOT2-242ENST00000553020 SHROOM2Q13796 1616 aa15.13■□□□□ 0.01
CNOT2-242ENST00000553020 EHBP1L1Q8N3D4 1523 aa15.12■□□□□ 0.01
CNOT2-242ENST00000553020 PTPRMP28827 1452 aa15.1■□□□□ 0.01
CNOT2-242ENST00000553020 UGGT2Q9NYU1 1516 aa15.1■□□□□ 0.01
CNOT2-242ENST00000553020 GRIN2AQ12879 1464 aa15.09■□□□□ 0.01
CNOT2-242ENST00000553020 KIAA0586Q9BVV6 1533 aa15.09■□□□□ 0.01
CNOT2-242ENST00000553020 HSPA2P54652 639 aa15.08■□□□□ 0
CNOT2-242ENST00000553020 SUPT6HQ7KZ85 1726 aaKnown RBP15.08■□□□□ 0
CNOT2-242ENST00000553020 ADCY10Q96PN6 1610 aa15.07■□□□□ 0
CNOT2-242ENST00000553020 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.07■□□□□ 03e-6■■□□□ 12.8
CNOT2-242ENST00000553020 FAM50AQ14320 339 aaKnown RBP15.05■□□□□ -0
CNOT2-242ENST00000553020 PHLDB1Q86UU1 1377 aa15.05■□□□□ -0
CNOT2-242ENST00000553020 PRG4Q92954 1404 aaPredicted RBP15.04■□□□□ -0
CNOT2-242ENST00000553020 KIAA0556O60303 1618 aa15.03■□□□□ -0
CNOT2-242ENST00000553020 ITGAEP38570 1179 aa15.03■□□□□ -0
CNOT2-242ENST00000553020 NUP160Q12769 1436 aa15.02■□□□□ -0
CNOT2-242ENST00000553020 FGD6Q6ZV73 1430 aa15□□□□□ -0.01
CNOT2-242ENST00000553020 DHX57Q6P158 1386 aaKnown RBP15□□□□□ -0.01
CNOT2-242ENST00000553020 CARMIL2Q6F5E8 1435 aa15□□□□□ -0.01
CNOT2-242ENST00000553020 SETD5Q9C0A6 1442 aa15□□□□□ -0.01
CNOT2-242ENST00000553020 NCOA2Q15596 1464 aa14.98□□□□□ -0.01
CNOT2-242ENST00000553020 MYOM3Q5VTT5 1437 aa14.98□□□□□ -0.01
CNOT2-242ENST00000553020 EPRSP07814 1512 aaKnown RBP14.97□□□□□ -0.01
CNOT2-242ENST00000553020 RAB3GAP2Q9H2M9 1393 aa14.96□□□□□ -0.02
CNOT2-242ENST00000553020 GLI2P10070 1586 aa14.95□□□□□ -0.02
CNOT2-242ENST00000553020 CDK11AQ9UQ88 783 aaPredicted RBP14.95□□□□□ -0.02
CNOT2-242ENST00000553020 RAPGEF6Q8TEU7 1601 aa14.95□□□□□ -0.02
CNOT2-242ENST00000553020 LRRIQ1Q96JM4 1722 aa14.94□□□□□ -0.02
CNOT2-242ENST00000553020 ZNF316A6NFI3 1004 aaPredicted RBP14.93□□□□□ -0.02
CNOT2-242ENST00000553020 ADAMTSL3P82987 1691 aa14.93□□□□□ -0.02
CNOT2-242ENST00000553020 DISP1Q96F81 1524 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms