RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 ARHGEF11O15085 1522 aa16.43■□□□□ 0.22
LETMD1-234ENST00000552645 EHMT2Q96KQ7 1210 aa16.41■□□□□ 0.22
LETMD1-234ENST00000552645 PRXQ9BXM0 1461 aa16.41■□□□□ 0.22
LETMD1-234ENST00000552645 KIAA0586Q9BVV6 1533 aa16.37■□□□□ 0.21
LETMD1-234ENST00000552645 JPH4Q96JJ6 628 aa16.36■□□□□ 0.21
LETMD1-234ENST00000552645 CTTNBP2Q8WZ74 1663 aa16.36■□□□□ 0.21
LETMD1-234ENST00000552645 SHROOM2Q13796 1616 aa16.36■□□□□ 0.21
LETMD1-234ENST00000552645 IQGAP2Q13576 1575 aa16.34■□□□□ 0.21
LETMD1-234ENST00000552645 ERCC6L2Q5T890 1561 aa16.34■□□□□ 0.21
LETMD1-234ENST00000552645 PRG4Q92954 1404 aaPredicted RBP16.33■□□□□ 0.2
LETMD1-234ENST00000552645 KIF21BO75037 1637 aa16.32■□□□□ 0.2
LETMD1-234ENST00000552645 CYB5RLQ6IPT4 315 aa16.32■□□□□ 0.2
LETMD1-234ENST00000552645 ARAP1Q96P48 1450 aa16.3■□□□□ 0.2
LETMD1-234ENST00000552645 UBTFP17480 764 aaKnown RBP16.27■□□□□ 0.19
LETMD1-234ENST00000552645 RANGAP1P46060 587 aaPredicted RBP16.27■□□□□ 0.19
LETMD1-234ENST00000552645 TTBK1Q5TCY1 1321 aaPredicted RBP16.26■□□□□ 0.19
LETMD1-234ENST00000552645 GOLGA3Q08378 1498 aa16.24■□□□□ 0.19
LETMD1-234ENST00000552645 CARMIL2Q6F5E8 1435 aa16.22■□□□□ 0.19
LETMD1-234ENST00000552645 UGGT2Q9NYU1 1516 aa16.21■□□□□ 0.19
LETMD1-234ENST00000552645 DISP1Q96F81 1524 aa16.19■□□□□ 0.18
LETMD1-234ENST00000552645 KIAA0556O60303 1618 aa16.18■□□□□ 0.18
LETMD1-234ENST00000552645 P3H3Q8IVL6 736 aa16.16■□□□□ 0.18
LETMD1-234ENST00000552645 PTPRGP23470 1445 aa16.15■□□□□ 0.18
LETMD1-234ENST00000552645 TNIKQ9UKE5 1360 aa16.14■□□□□ 0.18
LETMD1-234ENST00000552645 SAMD9Q5K651 1589 aa16.09■□□□□ 0.17
LETMD1-234ENST00000552645 LOC105371045A0A1W2PR82 267 aa16.08■□□□□ 0.16
LETMD1-234ENST00000552645 ADCY10Q96PN6 1610 aa16.07■□□□□ 0.16
LETMD1-234ENST00000552645 EFCAB5A4FU69 1503 aa16.05■□□□□ 0.16
LETMD1-234ENST00000552645 FHOD3Q2V2M9 1422 aa16.05■□□□□ 0.16
LETMD1-234ENST00000552645 NPM1P06748 294 aaKnown RBP eCLIP16.04■□□□□ 0.16
LETMD1-234ENST00000552645 UACAQ9BZF9 1416 aa16.03■□□□□ 0.16
LETMD1-234ENST00000552645 PLB1Q6P1J6 1458 aa16.02■□□□□ 0.16
LETMD1-234ENST00000552645 ARHGAP35Q9NRY4 1499 aa16■□□□□ 0.15
LETMD1-234ENST00000552645 ABCC2Q92887 1545 aa15.99■□□□□ 0.15
LETMD1-234ENST00000552645 ARID3CA6NKF2 412 aa15.98■□□□□ 0.15
LETMD1-234ENST00000552645 TRHP20396 242 aaPredicted RBP15.98■□□□□ 0.15
LETMD1-234ENST00000552645 CLIP1P30622 1438 aa15.97■□□□□ 0.15
LETMD1-234ENST00000552645 ABCA8O94911 1581 aa15.97■□□□□ 0.15
LETMD1-234ENST00000552645 UHRF1BP1LA0JNW5 1464 aa15.96■□□□□ 0.15
LETMD1-234ENST00000552645 RAPGEF6Q8TEU7 1601 aa15.95■□□□□ 0.14
LETMD1-234ENST00000552645 ZCCHC11Q5TAX3 1644 aaKnown RBP15.94■□□□□ 0.14
LETMD1-234ENST00000552645 CEP162Q5TB80 1403 aa15.94■□□□□ 0.14
LETMD1-234ENST00000552645 ATP1B4Q9UN42 357 aaPredicted RBP15.94■□□□□ 0.14
LETMD1-234ENST00000552645 FMN1Q68DA7 1419 aa15.91■□□□□ 0.14
LETMD1-234ENST00000552645 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.9■□□□□ 0.14
LETMD1-234ENST00000552645 HNRNPUL2Q1KMD3 747 aaKnown RBP15.9■□□□□ 0.14
LETMD1-234ENST00000552645 KDM5BQ9UGL1 1544 aa15.9■□□□□ 0.14
LETMD1-234ENST00000552645 MAPKBP1O60336 1514 aa15.89■□□□□ 0.13
LETMD1-234ENST00000552645 ASXL2Q76L83 1435 aa15.87■□□□□ 0.13
LETMD1-234ENST00000552645 NUP153P49790 1475 aaKnown RBP15.86■□□□□ 0.13
LETMD1-234ENST00000552645 ATP10BO94823 1461 aa15.85■□□□□ 0.13
LETMD1-234ENST00000552645 KIF13AQ9H1H9 1805 aa15.85■□□□□ 0.13
LETMD1-234ENST00000552645 HECW1Q76N89 1606 aa15.85■□□□□ 0.13
LETMD1-234ENST00000552645 PCF11O94913 1555 aaKnown RBP15.83■□□□□ 0.13
LETMD1-234ENST00000552645 FAM69CQ0P6D2 419 aa15.83■□□□□ 0.13
LETMD1-234ENST00000552645 KCNH8Q96L42 1107 aa15.82■□□□□ 0.12
LETMD1-234ENST00000552645 CDK13Q14004 1512 aaKnown RBP15.82■□□□□ 0.12
LETMD1-234ENST00000552645 DIP2BQ9P265 1576 aa15.82■□□□□ 0.12
LETMD1-234ENST00000552645 ABCC10Q5T3U5 1492 aa15.81■□□□□ 0.12
LETMD1-234ENST00000552645 WDR7Q9Y4E6 1490 aa15.8■□□□□ 0.12
LETMD1-234ENST00000552645 TSPOAP1O95153 1857 aa15.8■□□□□ 0.12
LETMD1-234ENST00000552645 LRRIQ1Q96JM4 1722 aa15.8■□□□□ 0.12
LETMD1-234ENST00000552645 EPRSP07814 1512 aaKnown RBP15.78■□□□□ 0.12
LETMD1-234ENST00000552645 CASKIN1Q8WXD9 1431 aa15.78■□□□□ 0.12
LETMD1-234ENST00000552645 FYCO1Q9BQS8 1478 aa15.77■□□□□ 0.11
LETMD1-234ENST00000552645 PLEKHD1A6NEE1 506 aa15.76■□□□□ 0.11
LETMD1-234ENST00000552645 CDK11AQ9UQ88 783 aaPredicted RBP15.72■□□□□ 0.11
LETMD1-234ENST00000552645 CCDC18Q5T9S5 1454 aa15.71■□□□□ 0.11
LETMD1-234ENST00000552645 VPS8Q8N3P4 1428 aa15.71■□□□□ 0.11
LETMD1-234ENST00000552645 GLI2P10070 1586 aa15.71■□□□□ 0.11
LETMD1-234ENST00000552645 MAP3K4Q9Y6R4 1608 aa15.69■□□□□ 0.1
LETMD1-234ENST00000552645 CFAP43Q8NDM7 1665 aa15.67■□□□□ 0.1
LETMD1-234ENST00000552645 CD109Q6YHK3 1445 aa15.66■□□□□ 0.1
LETMD1-234ENST00000552645 ABCA9Q8IUA7 1624 aa15.65■□□□□ 0.1
LETMD1-234ENST00000552645 KIF14Q15058 1648 aa15.64■□□□□ 0.09
LETMD1-234ENST00000552645 PPRC1Q5VV67 1664 aaKnown RBP15.64■□□□□ 0.09
LETMD1-234ENST00000552645 TROQ12816 1431 aaPredicted RBP15.64■□□□□ 0.09
LETMD1-234ENST00000552645 MAGI3Q5TCQ9 1506 aa15.63■□□□□ 0.09
LETMD1-234ENST00000552645 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.63■□□□□ 0.09
LETMD1-234ENST00000552645 TTC37Q6PGP7 1564 aa15.63■□□□□ 0.09
LETMD1-234ENST00000552645 MTUS2Q5JR59 1369 aa15.62■□□□□ 0.09
LETMD1-234ENST00000552645 APLP2Q06481 763 aa15.61■□□□□ 0.09
LETMD1-234ENST00000552645 TIAM1Q13009 1591 aa15.6■□□□□ 0.09
LETMD1-234ENST00000552645 TEX14Q8IWB6 1497 aa15.6■□□□□ 0.09
LETMD1-234ENST00000552645 MYO5CQ9NQX4 1742 aa15.58■□□□□ 0.09
LETMD1-234ENST00000552645 KDM6BO15054 1643 aa15.56■□□□□ 0.08
LETMD1-234ENST00000552645 EHBP1L1Q8N3D4 1523 aa15.55■□□□□ 0.08
LETMD1-234ENST00000552645 KANK4Q5T7N3 995 aaPredicted RBP15.52■□□□□ 0.08
LETMD1-234ENST00000552645 CDC42BPAQ5VT25 1732 aa15.52■□□□□ 0.07
LETMD1-234ENST00000552645 SUPT6HQ7KZ85 1726 aaKnown RBP15.52■□□□□ 0.07
LETMD1-234ENST00000552645 FANCAO15360 1455 aa15.52■□□□□ 0.07
LETMD1-234ENST00000552645 LRRC9Q6ZRR7 1453 aa15.52■□□□□ 0.07
LETMD1-234ENST00000552645 ARHGAP5Q13017 1502 aa15.51■□□□□ 0.07
LETMD1-234ENST00000552645 PLCH2O75038 1416 aa15.51■□□□□ 0.07
LETMD1-234ENST00000552645 MAP3K1Q13233 1512 aa15.51■□□□□ 0.07
LETMD1-234ENST00000552645 CDC42BPBQ9Y5S2 1711 aa15.51■□□□□ 0.07
LETMD1-234ENST00000552645 CFAP74Q9C0B2 1584 aa15.5■□□□□ 0.07
LETMD1-234ENST00000552645 CCNB3Q8WWL7 1395 aa15.5■□□□□ 0.07
LETMD1-234ENST00000552645 PREX2Q70Z35 1606 aa15.5■□□□□ 0.07
LETMD1-234ENST00000552645 NEO1Q92859 1461 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms