RNA–Protein interactions for RNA: ENST00000551317.5

EFCAB2-216, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 3

Gene EFCAB2, Length 520 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-216ENST00000551317 MAGI1Q96QZ7 1491 aaPredicted RBP12.46□□□□□ -0.41
EFCAB2-216ENST00000551317 CEP162Q5TB80 1403 aa12.45□□□□□ -0.42
EFCAB2-216ENST00000551317 FHAD1B1AJZ9 1412 aa12.45□□□□□ -0.42
EFCAB2-216ENST00000551317 AQRO60306 1485 aaKnown RBP eCLIP12.44□□□□□ -0.42
EFCAB2-216ENST00000551317 SNAPC4Q5SXM2 1469 aa12.42□□□□□ -0.42
EFCAB2-216ENST00000551317 RTN4Q9NQC3 1192 aaKnown RBP12.39□□□□□ -0.43
EFCAB2-216ENST00000551317 SYNJ2O15056 1496 aa12.39□□□□□ -0.43
EFCAB2-216ENST00000551317 EFCAB5A4FU69 1503 aa12.38□□□□□ -0.43
EFCAB2-216ENST00000551317 UBTFP17480 764 aaKnown RBP12.37□□□□□ -0.43
EFCAB2-216ENST00000551317 GRIN2AQ12879 1464 aa12.37□□□□□ -0.43
EFCAB2-216ENST00000551317 CLIP1P30622 1438 aa12.37□□□□□ -0.43
EFCAB2-216ENST00000551317 SAMD9Q5K651 1589 aa12.35□□□□□ -0.43
EFCAB2-216ENST00000551317 IQGAP2Q13576 1575 aa12.35□□□□□ -0.43
EFCAB2-216ENST00000551317 CHD1O14646 1710 aa12.34□□□□□ -0.43
EFCAB2-216ENST00000551317 AMER1Q5JTC6 1135 aaPredicted RBP12.34□□□□□ -0.43
EFCAB2-216ENST00000551317 CEP170Q5SW79 1584 aa12.31□□□□□ -0.44
EFCAB2-216ENST00000551317 ARAP1Q96P48 1450 aa12.31□□□□□ -0.44
EFCAB2-216ENST00000551317 ARHGAP35Q9NRY4 1499 aa12.31□□□□□ -0.44
EFCAB2-216ENST00000551317 NUP160Q12769 1436 aa12.3□□□□□ -0.44
EFCAB2-216ENST00000551317 VPS8Q8N3P4 1428 aa12.29□□□□□ -0.44
EFCAB2-216ENST00000551317 UGGT2Q9NYU1 1516 aa12.29□□□□□ -0.44
EFCAB2-216ENST00000551317 KIAA0586Q9BVV6 1533 aa12.28□□□□□ -0.44
EFCAB2-216ENST00000551317 KIAA0556O60303 1618 aa12.24□□□□□ -0.45
EFCAB2-216ENST00000551317 SHROOM2Q13796 1616 aa12.22□□□□□ -0.45
EFCAB2-216ENST00000551317 CFAP43Q8NDM7 1665 aa12.22□□□□□ -0.45
EFCAB2-216ENST00000551317 PCF11O94913 1555 aaKnown RBP12.22□□□□□ -0.45
EFCAB2-216ENST00000551317 SLC4A1APQ9BWU0 796 aaKnown RBP12.2□□□□□ -0.46
EFCAB2-216ENST00000551317 CLASP1Q7Z460 1538 aa12.2□□□□□ -0.46
EFCAB2-216ENST00000551317 FYCO1Q9BQS8 1478 aa12.19□□□□□ -0.46
EFCAB2-216ENST00000551317 MAP3K1Q13233 1512 aa12.18□□□□□ -0.46
EFCAB2-216ENST00000551317 CHMP7Q8WUX9 453 aaPredicted RBP12.18□□□□□ -0.46
EFCAB2-216ENST00000551317 PPP6R1Q9UPN7 881 aa12.18□□□□□ -0.46
EFCAB2-216ENST00000551317 FMN1Q68DA7 1419 aa12.18□□□□□ -0.46
EFCAB2-216ENST00000551317 DISP1Q96F81 1524 aa12.17□□□□□ -0.46
EFCAB2-216ENST00000551317 FHOD3Q2V2M9 1422 aa12.16□□□□□ -0.46
EFCAB2-216ENST00000551317 HECW1Q76N89 1606 aa12.15□□□□□ -0.47
EFCAB2-216ENST00000551317 TIAM1Q13009 1591 aa12.13□□□□□ -0.47
EFCAB2-216ENST00000551317 CASKIN1Q8WXD9 1431 aa12.13□□□□□ -0.47
EFCAB2-216ENST00000551317 LRRIQ1Q96JM4 1722 aa12.13□□□□□ -0.47
EFCAB2-216ENST00000551317 ADRA2BP18089 450 aa12.12□□□□□ -0.47
EFCAB2-216ENST00000551317 CARMIL2Q6F5E8 1435 aa12.11□□□□□ -0.47
EFCAB2-216ENST00000551317 RAPGEF6Q8TEU7 1601 aa12.1□□□□□ -0.47
EFCAB2-216ENST00000551317 CCDC18Q5T9S5 1454 aa12.08□□□□□ -0.47
EFCAB2-216ENST00000551317 RANGAP1P46060 587 aaPredicted RBP12.08□□□□□ -0.48
EFCAB2-216ENST00000551317 FBLN2P98095 1184 aa12.08□□□□□ -0.48
EFCAB2-216ENST00000551317 ABCA8O94911 1581 aa12.05□□□□□ -0.48
EFCAB2-216ENST00000551317 EHBP1L1Q8N3D4 1523 aa12.03□□□□□ -0.48
EFCAB2-216ENST00000551317 JPH4Q96JJ6 628 aa12.03□□□□□ -0.48
EFCAB2-216ENST00000551317 PRG4Q92954 1404 aaPredicted RBP12.03□□□□□ -0.48
EFCAB2-216ENST00000551317 LRRC9Q6ZRR7 1453 aa12.02□□□□□ -0.48
EFCAB2-216ENST00000551317 APLP2Q06481 763 aa12.01□□□□□ -0.49
EFCAB2-216ENST00000551317 EPRSP07814 1512 aaKnown RBP12.01□□□□□ -0.49
EFCAB2-216ENST00000551317 NUP153P49790 1475 aaKnown RBP12□□□□□ -0.49
EFCAB2-216ENST00000551317 ERCC6L2Q5T890 1561 aa12□□□□□ -0.49
EFCAB2-216ENST00000551317 P3H3Q8IVL6 736 aa11.99□□□□□ -0.49
EFCAB2-216ENST00000551317 SUPT6HQ7KZ85 1726 aaKnown RBP11.99□□□□□ -0.49
EFCAB2-216ENST00000551317 ADCY10Q96PN6 1610 aa11.97□□□□□ -0.49
EFCAB2-216ENST00000551317 TRIM26Q12899 539 aaPredicted RBP11.97□□□□□ -0.49
EFCAB2-216ENST00000551317 ABCC2Q92887 1545 aa11.96□□□□□ -0.49
EFCAB2-216ENST00000551317 PLB1Q6P1J6 1458 aa11.96□□□□□ -0.49
EFCAB2-216ENST00000551317 ARHGEF11O15085 1522 aa11.96□□□□□ -0.5
EFCAB2-216ENST00000551317 CDK13Q14004 1512 aaKnown RBP11.96□□□□□ -0.5
EFCAB2-216ENST00000551317 MAGI3Q5TCQ9 1506 aa11.95□□□□□ -0.5
EFCAB2-216ENST00000551317 UHRF1BP1LA0JNW5 1464 aa11.94□□□□□ -0.5
EFCAB2-216ENST00000551317 PTPRGP23470 1445 aa11.93□□□□□ -0.5
EFCAB2-216ENST00000551317 RRBP1Q9P2E9 1410 aaKnown RBP11.93□□□□□ -0.5
EFCAB2-216ENST00000551317 UACAQ9BZF9 1416 aa11.92□□□□□ -0.5
EFCAB2-216ENST00000551317 ITSN2Q9NZM3 1697 aa11.91□□□□□ -0.5
EFCAB2-216ENST00000551317 OSCARQ8IYS5 282 aa11.9□□□□□ -0.5
EFCAB2-216ENST00000551317 MTUS2Q5JR59 1369 aa11.9□□□□□ -0.5
EFCAB2-216ENST00000551317 ZCCHC11Q5TAX3 1644 aaKnown RBP11.89□□□□□ -0.51
EFCAB2-216ENST00000551317 NCBP3Q53F19 620 aaKnown RBP11.89□□□□□ -0.51
EFCAB2-216ENST00000551317 KANK4Q5T7N3 995 aaPredicted RBP11.89□□□□□ -0.51
EFCAB2-216ENST00000551317 KIF14Q15058 1648 aa11.89□□□□□ -0.51
EFCAB2-216ENST00000551317 NCOA2Q15596 1464 aa11.88□□□□□ -0.51
EFCAB2-216ENST00000551317 TROQ12816 1431 aaPredicted RBP11.87□□□□□ -0.51
EFCAB2-216ENST00000551317 KDM5BQ9UGL1 1544 aa11.86□□□□□ -0.51
EFCAB2-216ENST00000551317 ATP10BO94823 1461 aa11.86□□□□□ -0.51
EFCAB2-216ENST00000551317 PHLDB1Q86UU1 1377 aa11.85□□□□□ -0.51
EFCAB2-216ENST00000551317 PPARGC1BQ86YN6 1023 aaKnown RBP11.85□□□□□ -0.51
EFCAB2-216ENST00000551317 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.84□□□□□ -0.51
EFCAB2-216ENST00000551317 MYOM3Q5VTT5 1437 aa11.84□□□□□ -0.51
EFCAB2-216ENST00000551317 CDC42BPAQ5VT25 1732 aa11.83□□□□□ -0.52
EFCAB2-216ENST00000551317 PCGF6Q9BYE7 350 aa11.83□□□□□ -0.52
EFCAB2-216ENST00000551317 ATP1B4Q9UN42 357 aaPredicted RBP11.83□□□□□ -0.52
EFCAB2-216ENST00000551317 RIMBP3CA6NJZ7 1639 aa11.82□□□□□ -0.52
EFCAB2-216ENST00000551317 RIMBP3BA6NNM3 1639 aa11.82□□□□□ -0.52
EFCAB2-216ENST00000551317 PTPN23Q9H3S7 1636 aa11.82□□□□□ -0.52
EFCAB2-216ENST00000551317 RIMBP3Q9UFD9 1639 aa11.82□□□□□ -0.52
EFCAB2-216ENST00000551317 CCNB3Q8WWL7 1395 aa11.82□□□□□ -0.52
EFCAB2-216ENST00000551317 CDK11AQ9UQ88 783 aaPredicted RBP11.82□□□□□ -0.52
EFCAB2-216ENST00000551317 FGD6Q6ZV73 1430 aa11.82□□□□□ -0.52
EFCAB2-216ENST00000551317 TCOF1Q13428 1488 aaKnown RBP11.82□□□□□ -0.52
EFCAB2-216ENST00000551317 PREX2Q70Z35 1606 aa11.82□□□□□ -0.52
EFCAB2-216ENST00000551317 MIA2Q96PC5 1412 aa11.8□□□□□ -0.52
EFCAB2-216ENST00000551317 TTBK1Q5TCY1 1321 aaPredicted RBP11.8□□□□□ -0.52
EFCAB2-216ENST00000551317 MYO5CQ9NQX4 1742 aa11.8□□□□□ -0.52
EFCAB2-216ENST00000551317 ABCC10Q5T3U5 1492 aa11.79□□□□□ -0.52
EFCAB2-216ENST00000551317 CROCC2H7BZ55 1655 aa11.78□□□□□ -0.52
EFCAB2-216ENST00000551317 TTC37Q6PGP7 1564 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms